ISBli16
- Family ISNCY
- Group ISLbi1
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP017150 | ND | Brevibacterium linens | Brevibacterium linens SMQ-1335 Brevibacterium linens Brevibacterium aurantiacum |
DNA section
IS Length : 1428 bp
Ends
IR Length : 17/27
IRL : TCGACCAGACTCACGTAAACAGCCCGGATGCCACCCTCGGTGCCTCATAT
IRR : CCGTAATGCCTCATGTCAATATGCCCGCGAAATGTTCTCGATGCCTCACA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
GTAGACATTTCGC | AAGGCA | GGGACACCGCCCGAG | 6 |
DNA sequence
TCGACCAGACTCACGTAAACAGCCCGGATGCCACCCTCGGTGCCTCATATACTTTTGCCCGCGAAATGGTGGACCCTCGGAAGCTATGGGGAGTGAACTG
TCGATGGCGACTCGAGCAGAGATCACCACGAAATACGCCAGGGAATACAAGAAGGCTTCGAAGAAGAACAAGGGCACTGTTCTTAACGAGGTCATGGCCG
TCACGGGCTGGACCCGCGACAACGCACGACGGCGATTAACCCAAGCCGCGAAACACCCACCCGGCCGCGGCAAGCAAGTCGCTTCGCATCCGCGTCAACC
TCGGGCCAGGAAATACTCCTACGACGCGGTCAAAATCCTCCAGCGCGTGTGGGCGATCTCGGGTGGTCAATGCGGCAAATACCTCCACACCACGATGCGG
ATCCTCCTTGACCTCCTCGAAGCCCACAACGAGCTCACCCTCGGCCAGGACCGCTACACCAAAAAGGTGCGTAAGGAACTGCTTGCGATGAGTCCGGCCA
CGATCGACCGGTACCTCAAACCCGTGCGAGCCAGGGACGCGATCAACGGGATCTCGACGACGAAGCCCGGGTCCTTGCTGCGTTCAGCGATCACGATCCG
CCGGGCCGGTGACGATGTCGAAGGCGAGCCCGGCTTCTTCGAAGGAGACACCGTCGCCCACTGCGGACCCGTTGAGTCCGGGGAATTCGCACGCACGCTC
AACCTCACCGACTTCCACACGGGGTGGACGTTCACGCGCACGGTGCGTAACAACGCTCATACGAACATCCTGGCGGGGTTGAAGACCGCAGCTCGTGAGA
TTCCATTTCAGATCACTGGCTTGGACTTCGATAACGGGTCGGAGTTCCTCAACCAATACGTCATCGAATGGGCCGGGTCGAAAGGCATCTACTTCACCCG
GTCGCGGCCGTATAAAAAGAACGATCAGGCCACGATCGAGTCAAAGAACAACCACGTCGTACGCCGGTATGGGTTCTACTACCGTTACGACACTGACCTG
GAACGACGAGCACTCAACCGGCTATGGCGTTTAGTCAATGATCGGGTCAATTATCTGATGCCCACGATCAAGCCGACCGGGTATGGAGCGACGAAGAATG
GGCGACGTAAACGTGTCTATGATCGGCCCCGGACTCCCTTCGATAGGCTCCTCGATTCTGGTGTCTTAGCGCCGAAACAGGTGAAGGACATGACGGCGTA
TCGCAACAGTCTCAACCCGGCGAGGATCGCTGCTGAGATCGCCCGGGTCCAGGACCGATTGCTGGTTCTATCGGGTAAGAAGACCGAGCAAATGTATCTG
GCTTCGTTCCCGTCAGCCCTGCCGGATGTGCGTAAGGGCGTGCGAGTCAAGACTGGGTAGGTTTCGCGGGCAAATCTATGTGAGGCATCGAGAACATTTC
GCGGGCATATTGACATGAGGCATTACGG
TCGATGGCGACTCGAGCAGAGATCACCACGAAATACGCCAGGGAATACAAGAAGGCTTCGAAGAAGAACAAGGGCACTGTTCTTAACGAGGTCATGGCCG
TCACGGGCTGGACCCGCGACAACGCACGACGGCGATTAACCCAAGCCGCGAAACACCCACCCGGCCGCGGCAAGCAAGTCGCTTCGCATCCGCGTCAACC
TCGGGCCAGGAAATACTCCTACGACGCGGTCAAAATCCTCCAGCGCGTGTGGGCGATCTCGGGTGGTCAATGCGGCAAATACCTCCACACCACGATGCGG
ATCCTCCTTGACCTCCTCGAAGCCCACAACGAGCTCACCCTCGGCCAGGACCGCTACACCAAAAAGGTGCGTAAGGAACTGCTTGCGATGAGTCCGGCCA
CGATCGACCGGTACCTCAAACCCGTGCGAGCCAGGGACGCGATCAACGGGATCTCGACGACGAAGCCCGGGTCCTTGCTGCGTTCAGCGATCACGATCCG
CCGGGCCGGTGACGATGTCGAAGGCGAGCCCGGCTTCTTCGAAGGAGACACCGTCGCCCACTGCGGACCCGTTGAGTCCGGGGAATTCGCACGCACGCTC
AACCTCACCGACTTCCACACGGGGTGGACGTTCACGCGCACGGTGCGTAACAACGCTCATACGAACATCCTGGCGGGGTTGAAGACCGCAGCTCGTGAGA
TTCCATTTCAGATCACTGGCTTGGACTTCGATAACGGGTCGGAGTTCCTCAACCAATACGTCATCGAATGGGCCGGGTCGAAAGGCATCTACTTCACCCG
GTCGCGGCCGTATAAAAAGAACGATCAGGCCACGATCGAGTCAAAGAACAACCACGTCGTACGCCGGTATGGGTTCTACTACCGTTACGACACTGACCTG
GAACGACGAGCACTCAACCGGCTATGGCGTTTAGTCAATGATCGGGTCAATTATCTGATGCCCACGATCAAGCCGACCGGGTATGGAGCGACGAAGAATG
GGCGACGTAAACGTGTCTATGATCGGCCCCGGACTCCCTTCGATAGGCTCCTCGATTCTGGTGTCTTAGCGCCGAAACAGGTGAAGGACATGACGGCGTA
TCGCAACAGTCTCAACCCGGCGAGGATCGCTGCTGAGATCGCCCGGGTCCAGGACCGATTGCTGGTTCTATCGGGTAAGAAGACCGAGCAAATGTATCTG
GCTTCGTTCCCGTCAGCCCTGCCGGATGTGCGTAAGGGCGTGCGAGTCAAGACTGGGTAGGTTTCGCGGGCAAATCTATGTGAGGCATCGAGAACATTTC
GCGGGCATATTGACATGAGGCATTACGG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1257 bp | 418 aa | 104 | 1360 | + | No |
Chemistry : Unknow
ORF sequence :
MATRAEITTKYAREYKKASKKNKGTVLNEVMAVTGWTRDNARRRLTQAAKHPPGRGKQVASHPRQPRARKYSYDAVKILQRVWAISGGQCGKYLHTTMRI
LLDLLEAHNELTLGQDRYTKKVRKELLAMSPATIDRYLKPVRARDAINGISTTKPGSLLRSAITIRRAGDDVEGEPGFFEGDTVAHCGPVESGEFARTLN
LTDFHTGWTFTRTVRNNAHTNILAGLKTAAREIPFQITGLDFDNGSEFLNQYVIEWAGSKGIYFTRSRPYKKNDQATIESKNNHVVRRYGFYYRYDTDLE
RRALNRLWRLVNDRVNYLMPTIKPTGYGATKNGRRKRVYDRPRTPFDRLLDSGVLAPKQVKDMTAYRNSLNPARIAAEIARVQDRLLVLSGKKTEQMYLA
SFPSALPDVRKGVRVKTG
LLDLLEAHNELTLGQDRYTKKVRKELLAMSPATIDRYLKPVRARDAINGISTTKPGSLLRSAITIRRAGDDVEGEPGFFEGDTVAHCGPVESGEFARTLN
LTDFHTGWTFTRTVRNNAHTNILAGLKTAAREIPFQITGLDFDNGSEFLNQYVIEWAGSKGIYFTRSRPYKKNDQATIESKNNHVVRRYGFYYRYDTDLE
RRALNRLWRLVNDRVNYLMPTIKPTGYGATKNGRRKRVYDRPRTPFDRLLDSGVLAPKQVKDMTAYRNSLNPARIAAEIARVQDRLLVLSGKKTEQMYLA
SFPSALPDVRKGVRVKTG
Blast result :
Comments
ISBli16 is 53% aa similar to ISKol11.
References
1] Sebastien Levesque (2017) Direct submission.
2] de Melo,A.G., Labrie,S.J., Dumaresq,J., Roberts,R.J., Tremblay,D.M. and Moineau,S. (2016) Direct GenBank submission.
2] de Melo,A.G., Labrie,S.J., Dumaresq,J., Roberts,R.J., Tremblay,D.M. and Moineau,S. (2016) Direct GenBank submission.