ISBli14
- Family ISL3
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP017150 | ND | Brevibacterium linens | Brevibacterium linens SMQ-1335 Brevibacterium linens Brevibacterium aurantiacum |
DNA section
IS Length : 1435 bp
Ends
IR Length : 28/31
IRL : GGCTCTTCGTAATTGAGAGTGTAGATCGGTGATTCCAGAACACGGCGCGT
IRR : GGCTCATCGTAATTGAGAGTGTAGAACCGGTCTGAAGCCACCGGACTCGA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
GCCCTTAATC | TGAAATACGT | 0 |
DNA sequence
GGCTCTTCGTAATTGAGAGTGTAGATCGGTGATTCCAGAACACGGCGCGTCGCTGCCCGGATAGACGTCGAGGTCTTCCGATGATGGAAGTTCTCACACA
GTCCATCCGAAAGACCTCGACATGGCCAAGCCTACTTTCTCGACCCCTGACCTCACGACATTCTGCCGACTCGACACCCTCGACCTCGCCTGCATCGGCC
AGCACATCACCGGGCACAAGGCCGTCCTGGAATGCCGGCCCAACACTGCTGATGACTGGTGCCGTCGGTGCGGTGGCCACGGGATCATTCGCGACACCGT
CGTCCGCCAGCTGGCCCACGAACCCTTCGGCCACCGGCCGACCACGCTTCATATTCGCCTCCGCCGTTACAAATGCGTCGAGTGCGGCCGCGTATGGCGT
CAAGACACTACAGCTGCGGCACCACCACGAGCGAAGATCTCTCGAACCGGCCTCGACTGGGCGCTGCGTGCTCTCGTCATCGACCACGACACCGTGTCCG
TGATCGCAAGCAAACTCGCCGTGTCTTGGCACACCGCGAACTCCGCAATCCTCGCTGAAGGTCGCCGGCTGTTGATCAACGACCCGACCCGTTTCGGCGG
GGTCACCGTGATCGGCGTCGACGAGCACGTATGGCGGCACACCCGGCGTGGCGACAAGTACGTCACCGTCATCATCGACCTCACCCCGATCAGCCAGGCC
ACAGGCCCAGCACGTCTGCTCGACATGATGCCCGGACGTTCGAAACAGGTGTTCAAGCAATGGTTGAAAGCCCGTCCGAAGGACTGGCGTGATGGCATCG
ACGTCGTCGCGATGGACGGATTCTCCGGCTTCAAAACAGCCTCAGTTGAGGAACTGCCCGACGCTGTCGAAGTCATGGACCCCTTCCACGTCGTCAAGCT
CGCCGGTGATGCTCTCGATGATGTTCGTCGTCGTATTCAGCAGGAGACAACTGGCCATCGTGGACGAGCGAAAGACCCCTTGTATCGAGCGAGGAGGACT
CTGCACACAGGCGCTGATCTGCTCACGACCAAGCAGCAGGAGAGGATCGCGGGCCTGTTCGCCGATTCGAGTTTCACCGAAGTCGAAGTCACCTGGGCTG
TTTACCAAGACATTGTGAACGCCTACCGAACCGCCGACCGGAACGAGGGCAAAAAGCTCTTGAGAACGGTCATCGACGCACTGACGACGAAACTGCCGAC
AGGGCTGGTTGAGCTCAAACGGTTGGGAAGGACTCTGAAGCGTCGAGCTGCTGATGTGCTCGCGTTCTTCACCCGACCGGGAACGTCCAATGGTCCGACT
GAAGCGATCAACGGCAGGCTTGAACACCTCCGCGGGTCTGCTCTGGGGTTCCGTAACATCACCCACTACATCGCCAGGTGTCTGCTCGAGTCCGGTGGCT
TCAGACCGGTTCTACACTCTCAATTACGATGAGCC
GTCCATCCGAAAGACCTCGACATGGCCAAGCCTACTTTCTCGACCCCTGACCTCACGACATTCTGCCGACTCGACACCCTCGACCTCGCCTGCATCGGCC
AGCACATCACCGGGCACAAGGCCGTCCTGGAATGCCGGCCCAACACTGCTGATGACTGGTGCCGTCGGTGCGGTGGCCACGGGATCATTCGCGACACCGT
CGTCCGCCAGCTGGCCCACGAACCCTTCGGCCACCGGCCGACCACGCTTCATATTCGCCTCCGCCGTTACAAATGCGTCGAGTGCGGCCGCGTATGGCGT
CAAGACACTACAGCTGCGGCACCACCACGAGCGAAGATCTCTCGAACCGGCCTCGACTGGGCGCTGCGTGCTCTCGTCATCGACCACGACACCGTGTCCG
TGATCGCAAGCAAACTCGCCGTGTCTTGGCACACCGCGAACTCCGCAATCCTCGCTGAAGGTCGCCGGCTGTTGATCAACGACCCGACCCGTTTCGGCGG
GGTCACCGTGATCGGCGTCGACGAGCACGTATGGCGGCACACCCGGCGTGGCGACAAGTACGTCACCGTCATCATCGACCTCACCCCGATCAGCCAGGCC
ACAGGCCCAGCACGTCTGCTCGACATGATGCCCGGACGTTCGAAACAGGTGTTCAAGCAATGGTTGAAAGCCCGTCCGAAGGACTGGCGTGATGGCATCG
ACGTCGTCGCGATGGACGGATTCTCCGGCTTCAAAACAGCCTCAGTTGAGGAACTGCCCGACGCTGTCGAAGTCATGGACCCCTTCCACGTCGTCAAGCT
CGCCGGTGATGCTCTCGATGATGTTCGTCGTCGTATTCAGCAGGAGACAACTGGCCATCGTGGACGAGCGAAAGACCCCTTGTATCGAGCGAGGAGGACT
CTGCACACAGGCGCTGATCTGCTCACGACCAAGCAGCAGGAGAGGATCGCGGGCCTGTTCGCCGATTCGAGTTTCACCGAAGTCGAAGTCACCTGGGCTG
TTTACCAAGACATTGTGAACGCCTACCGAACCGCCGACCGGAACGAGGGCAAAAAGCTCTTGAGAACGGTCATCGACGCACTGACGACGAAACTGCCGAC
AGGGCTGGTTGAGCTCAAACGGTTGGGAAGGACTCTGAAGCGTCGAGCTGCTGATGTGCTCGCGTTCTTCACCCGACCGGGAACGTCCAATGGTCCGACT
GAAGCGATCAACGGCAGGCTTGAACACCTCCGCGGGTCTGCTCTGGGGTTCCGTAACATCACCCACTACATCGCCAGGTGTCTGCTCGAGTCCGGTGGCT
TCAGACCGGTTCTACACTCTCAATTACGATGAGCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1311 bp | 436 aa | 122 | 1432 | + | No |
Chemistry : Unknow
ORF sequence :
MAKPTFSTPDLTTFCRLDTLDLACIGQHITGHKAVLECRPNTADDWCRRCGGHGIIRDTVVRQLAHEPFGHRPTTLHIRLRRYKCVECGRVWRQDTTAAA
PPRAKISRTGLDWALRALVIDHDTVSVIASKLAVSWHTANSAILAEGRRLLINDPTRFGGVTVIGVDEHVWRHTRRGDKYVTVIIDLTPISQATGPARLL
DMMPGRSKQVFKQWLKARPKDWRDGIDVVAMDGFSGFKTASVEELPDAVEVMDPFHVVKLAGDALDDVRRRIQQETTGHRGRAKDPLYRARRTLHTGADL
LTTKQQERIAGLFADSSFTEVEVTWAVYQDIVNAYRTADRNEGKKLLRTVIDALTTKLPTGLVELKRLGRTLKRRAADVLAFFTRPGTSNGPTEAINGRL
EHLRGSALGFRNITHYIARCLLESGGFRPVLHSQLR
PPRAKISRTGLDWALRALVIDHDTVSVIASKLAVSWHTANSAILAEGRRLLINDPTRFGGVTVIGVDEHVWRHTRRGDKYVTVIIDLTPISQATGPARLL
DMMPGRSKQVFKQWLKARPKDWRDGIDVVAMDGFSGFKTASVEELPDAVEVMDPFHVVKLAGDALDDVRRRIQQETTGHRGRAKDPLYRARRTLHTGADL
LTTKQQERIAGLFADSSFTEVEVTWAVYQDIVNAYRTADRNEGKKLLRTVIDALTTKLPTGLVELKRLGRTLKRRAADVLAFFTRPGTSNGPTEAINGRL
EHLRGSALGFRNITHYIARCLLESGGFRPVLHSQLR
Blast result :
Comments
ISBli14 is 93% aa similar to ISBli1.
References
1] Sebastien Levesque (2017) Direct submission.
2] de Melo,A.G., Labrie,S.J., Dumaresq,J., Roberts,R.J., Tremblay,D.M. and Moineau,S. (2016) Direct GenBank submission.
2] de Melo,A.G., Labrie,S.J., Dumaresq,J., Roberts,R.J., Tremblay,D.M. and Moineau,S. (2016) Direct GenBank submission.