ISBli12
- Family ISL3
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP017150 | N | Brevibacterium linens | Brevibacterium linens SMQ-1335 Brevibacterium linens Brevibacterium aurantiacum |
DNA section
IS Length : 1435 bp
Ends
IR Length : 26/27
IRL : GGCTCTTCGTAATTGAGAGTGTAGAACGGTGATTTTCAACTAGGGTGAGT
IRR : GGCTCATCGTAATTGAGAGTGTAGAACCGGCCTGAAACCACCGGATTCGA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CACTATTGCC | GGATATCGCC | 0 |
DNA sequence
GGCTCTTCGTAATTGAGAGTGTAGAACGGTGATTTTCAACTAGGGTGAGTCGCTGCCCGGAAAGACGTCGAGGTCTTCCGATGATGGAAGTTCTCACACT
GCCCATCCGAAAGACCTCGACGTGGCCAAGCCTATATTCTCGACCCCTGACCTCACGACATTCGCCCGACTCGACACCCTGGACCTCACCTGCATCGGCC
AATACATCACCGCCAACAACGCCATCCTGAAATGCCGGCCGAATACCACCGATAACTGGTGCCGCCGGTGTGGCGGCCACGGCGACATCCGCGACACCGT
TCTGCGCCGGCTGGCACATGAACCCTTCGGACACAGGCCAACGACACTTCATATCCGCCTGCATCGCTACAAGTGCATCGAATGCGGCCACGTGTGGCGC
CAGGACACCACGGCTGCGGCACCAGCCCGGGCAAAGATCTCCCGGTCCGGACTCGATTGGGCACTGCGTGCGCTCGTCGTTGATCACGACACCGTGTCCG
TGATTGCTGCGAAACTCGCTGTGTCCTGGCATACCGCGAACTCCGCGGTTCTGGCCGAAGGACACCGGCTGCTGATCAATGATCCGAATCGTTTCGACGG
TGTGTCTGTCATTGGTGTCGATGAGCACGTGTGGCGCCACACTCGCCGGGGAGACAAATACGTCACAGTCATCATCGACCTCACTCCAATCGGCCAGGGC
ACGGGCCCCGCACGCCTACTCGATATGGTGCCCGGACGGTCAAAGCAGGTCTTCAAACAATGGTTGGCCGCTCGACCCAAGGATTGGCGTGATGGTATCG
AAGTCGTCGCGATGGACGGATTCTCAGGATTCAAAACAGCTGCAGCGGAGGAACTTCCCGATGCTGTAGAAGTCATGGATCCGTTCCACGTCGTCAAACT
TGCTGGTGATGCCCTCGATGACGTTCGTCGCCGCGTCCAGCAGGAAACAACTGGGCATCGGGGACGGGCGAAGGATCCGTTGTATCGGGCAAGGAGGACG
CTGCACACGGGTACGGACCTGCTCACAAGGCGACAACAAGCACGGATCGCCCGTCTCTTCGCTACTGCGAACCTCACCGAAGTCGAAGTCACCTGGGCTG
TCTATCAAGACATCGTGGCTGCCTACCGGGCCGAGGACAGAAGCGAAGGCAAGAGGCTCTTGCAGGCTGTCATCGATGTTCTGTCGACGGGTCTGCCTGC
TGGGTTGGTTGAGCTGAGGCGGTTAGGGAGAACCCTGAAGCGACGCGCAACTGACGTGTTGGCCTTCTTCACCAGGCCCGGGACGTCGAACGGGCCAACC
GAATCGATCAATGGCAGGCTCGAACATCTTCGGGGATCGGCATTGGGATTCCGCAACCTCACTCATTACATCGCCAGGTGCTTACTCGAATCCGGTGGTT
TCAGGCCGGTTCTACACTCTCAATTACGATGAGCC
GCCCATCCGAAAGACCTCGACGTGGCCAAGCCTATATTCTCGACCCCTGACCTCACGACATTCGCCCGACTCGACACCCTGGACCTCACCTGCATCGGCC
AATACATCACCGCCAACAACGCCATCCTGAAATGCCGGCCGAATACCACCGATAACTGGTGCCGCCGGTGTGGCGGCCACGGCGACATCCGCGACACCGT
TCTGCGCCGGCTGGCACATGAACCCTTCGGACACAGGCCAACGACACTTCATATCCGCCTGCATCGCTACAAGTGCATCGAATGCGGCCACGTGTGGCGC
CAGGACACCACGGCTGCGGCACCAGCCCGGGCAAAGATCTCCCGGTCCGGACTCGATTGGGCACTGCGTGCGCTCGTCGTTGATCACGACACCGTGTCCG
TGATTGCTGCGAAACTCGCTGTGTCCTGGCATACCGCGAACTCCGCGGTTCTGGCCGAAGGACACCGGCTGCTGATCAATGATCCGAATCGTTTCGACGG
TGTGTCTGTCATTGGTGTCGATGAGCACGTGTGGCGCCACACTCGCCGGGGAGACAAATACGTCACAGTCATCATCGACCTCACTCCAATCGGCCAGGGC
ACGGGCCCCGCACGCCTACTCGATATGGTGCCCGGACGGTCAAAGCAGGTCTTCAAACAATGGTTGGCCGCTCGACCCAAGGATTGGCGTGATGGTATCG
AAGTCGTCGCGATGGACGGATTCTCAGGATTCAAAACAGCTGCAGCGGAGGAACTTCCCGATGCTGTAGAAGTCATGGATCCGTTCCACGTCGTCAAACT
TGCTGGTGATGCCCTCGATGACGTTCGTCGCCGCGTCCAGCAGGAAACAACTGGGCATCGGGGACGGGCGAAGGATCCGTTGTATCGGGCAAGGAGGACG
CTGCACACGGGTACGGACCTGCTCACAAGGCGACAACAAGCACGGATCGCCCGTCTCTTCGCTACTGCGAACCTCACCGAAGTCGAAGTCACCTGGGCTG
TCTATCAAGACATCGTGGCTGCCTACCGGGCCGAGGACAGAAGCGAAGGCAAGAGGCTCTTGCAGGCTGTCATCGATGTTCTGTCGACGGGTCTGCCTGC
TGGGTTGGTTGAGCTGAGGCGGTTAGGGAGAACCCTGAAGCGACGCGCAACTGACGTGTTGGCCTTCTTCACCAGGCCCGGGACGTCGAACGGGCCAACC
GAATCGATCAATGGCAGGCTCGAACATCTTCGGGGATCGGCATTGGGATTCCGCAACCTCACTCATTACATCGCCAGGTGCTTACTCGAATCCGGTGGTT
TCAGGCCGGTTCTACACTCTCAATTACGATGAGCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1311 bp | 436 aa | 122 | 1432 | + | No |
Chemistry : Unknow
ORF sequence :
MAKPIFSTPDLTTFARLDTLDLTCIGQYITANNAILKCRPNTTDNWCRRCGGHGDIRDTVLRRLAHEPFGHRPTTLHIRLHRYKCIECGHVWRQDTTAAA
PARAKISRSGLDWALRALVVDHDTVSVIAAKLAVSWHTANSAVLAEGHRLLINDPNRFDGVSVIGVDEHVWRHTRRGDKYVTVIIDLTPIGQGTGPARLL
DMVPGRSKQVFKQWLAARPKDWRDGIEVVAMDGFSGFKTAAAEELPDAVEVMDPFHVVKLAGDALDDVRRRVQQETTGHRGRAKDPLYRARRTLHTGTDL
LTRRQQARIARLFATANLTEVEVTWAVYQDIVAAYRAEDRSEGKRLLQAVIDVLSTGLPAGLVELRRLGRTLKRRATDVLAFFTRPGTSNGPTESINGRL
EHLRGSALGFRNLTHYIARCLLESGGFRPVLHSQLR*
PARAKISRSGLDWALRALVVDHDTVSVIAAKLAVSWHTANSAVLAEGHRLLINDPNRFDGVSVIGVDEHVWRHTRRGDKYVTVIIDLTPIGQGTGPARLL
DMVPGRSKQVFKQWLAARPKDWRDGIEVVAMDGFSGFKTAAAEELPDAVEVMDPFHVVKLAGDALDDVRRRVQQETTGHRGRAKDPLYRARRTLHTGTDL
LTRRQQARIARLFATANLTEVEVTWAVYQDIVAAYRAEDRSEGKRLLQAVIDVLSTGLPAGLVELRRLGRTLKRRATDVLAFFTRPGTSNGPTESINGRL
EHLRGSALGFRNLTHYIARCLLESGGFRPVLHSQLR*
Blast result :
Comments
ISBli12 is 97% aa similar to ISBli1.
References
1] Sebastien Levesque (2017) Direct submission.
2] de Melo,A.G., Labrie,S.J., Dumaresq,J., Roberts,R.J., Tremblay,D.M. and Moineau,S. (2016) Direct GenBank submission.
2] de Melo,A.G., Labrie,S.J., Dumaresq,J., Roberts,R.J., Tremblay,D.M. and Moineau,S. (2016) Direct GenBank submission.