ISBst12
- Family IS66
- Group ISBst12
Isoform Synonym(s) ISBs12980
Accession number | Transposition | Origin | Host |
---|---|---|---|
AF162268 | ND | Bacillus stearothermophilus | Geobacillus stearothermophilus plasmid pGS18 Geobacillus kaustophilus HTA426 Geobacillus sp. WCH70 Bacillus stearothermophilus Geobacillus sp. WCH70 plasmid pWCH7001 |
DNA section
IS Length : 1612 bp
Ends
IR Length : 15/16
IRL : GTAACTATTCAGCCCATCATAAAGTGAGCTGAATATTTTCTTCTTTCCTT
IRR : GTAACTATTCACCCCAGTGCTAGTGTATAAAAAAGCCCAGCACAAATAGG
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
NNNNNNNNNN | CATTAAAG | NNNNNNNNNN | 8 |
TTTTTTTGTA | CAACTAAC | ATACTAATTG | 8 |
CTATATATGC | ATTCATTT | GTAAAGCAGC | 8 |
AAGCACATTT | GTTTTAGC | CGCAGGGGAA | 8 |
AATTATGTTA | CAAAATGA | AGACATAATT | 8 |
ATTAGAATTT | AATCGTAG | AAAAAGATCT | 8 |
AAAGAACCTT | ATTTTATC | TTAATTAGGC | 8 |
TCGATGACGA | TTTTAGGC | GATATTGCAC | 8 |
CCAAGCGTTA | AATCCCCT | TTATTTTCTT | 8 |
AAGAAAGAAA | AAATTTTT | TTATATCGGC | 8 |
CAACTTTTTA | AACCATTT | ATACATGCTA | 8 |
GTATATACAA | AAAAGAAC | CTTAGTCTGA | 8 |
TTTTAAACGC | CATCAATTTA | 0 | |
GCTGAAAATG | AAAAATTTTA | 0 | |
TCCTTTATGC | CTAATTTTTA | 0 |
DNA sequence
GTAACTATTCAGCCCATCATAAAGTGAGCTGAATATTTTCTTCTTTCCTTGTCTATGATGTGAATATTGATAGACAAGGAGGTGAATCGCATGTTGACGG
TACAACAAGCTGTATTTACAGTTGAGAGCTTAATCGGCAAAGTTCAACAACAAAAACAGCTCATTCATCAACTCATTCAAGAAAATGAACATTTGCGTCA
CGAAAACAAACAGCTACGCAAAGAAAATGAACAACTGAAGTACCGTGTTCAAGAGCTGGAAGCACGCACGAAAAAAAACAGCTCCAATAGCCATTTGCCC
CCATCTTCTGACCGTTTTGAGAAAAAGCGTTCCTCCCGCGAGCCGTCTGGCAAAAAGCCTGGTGGGCAAGAGGGACATGAGGGGAAGACGCTCCGTCAAG
TGGAACATCCACATCATCGTGTCGTCCACCGTGTGCATACGTGTCAAGGATGTGGAGCTTCTTTGCGTGAAGTCAAACCGTTCAAAGTCGATATCCGTCA
AGTGTTTGATGTCCCTCCTGTGGCGATCGAGGTGACACAACATGAACGTGAAGTGAAATCGTGTCCACATTGTCGATGCGTGCAACAAGCCGAATTCCCA
TCCCATGTCACGAATCATGTGCAATACGGTCCACGGCTCACGGCGCTCGTTGTTTATTTACATCATATCCAATTGATCCCGTACAAGCGTTTAAGTGATA
CAATCGAAGCGTTATATCAACACTCGATTAGTACAGGAACCCTTGCCAATATGGTGAAACGAGGACGCGAAGCGCTGGAATCAAATATGGACATCATCGA
AGACGCCTTACTTGAATCCAACATCCTGCATGTCGATGAAACGAGTTTGCGCATCAATGGGAAACTCGCATGGGTGCATGTCGCGTGTACATCGAGATAT
ACATACTTGGCTCCTCACGCTTCTCGTGGAAAAAAAGCGACCGATGAGATCGGGATTCTTCCCCGATATGAAGGGACGATGATGCACGATGCGTTCGGTA
CGTATCCGAAATACACACATGCCACCCATGCCCTTTGTCATGCCCACCATTTGCGTGAGTTAAAAGGATTCATCGAACAGGGGCATACGTGGGCGATGCG
CATGACCACGTTTCTGTTAGCCGCCAAGCAAGCCGTCGAAGCCCATCACGGTGCACTTTCCGAAGAAGAAGCGAGACGGTGGGAACGAGTGTATGATCGC
ATCCTAGAAAGAGCACAACACCGATTAGAAACGATGACGCCTCTTCCGAAAAAAGCACTCGCTTTTGTTCGACGCCTTCAAAAACGAAAGGAAGAAGCGC
TGCGTTTCTTACGTGAAGTACATGTTCCCTTTGACAACAACCAAGCCGAACGCGATCTTCGCATGGTTAAAGTCAAAGAGAACATTTCGGGTACATTTCG
CGAAGAAACATTCGCGCAGTCGTTTTGCATCGCAAGAAGCATCGTTTCCACACTGACGAAACACGAAAAAAACGTGTGGGATTCGTTATGTCTTCTGTTG
GCAGGCGAAACGATCGATCGAGTTCTTTCCGCTACCTAGGGCATTTTCTATGACCGAAATGCCCTATTTGTGCTGGGCTTTTTTATACACTAGCACTGGG
GTGAATAGTTAC
TACAACAAGCTGTATTTACAGTTGAGAGCTTAATCGGCAAAGTTCAACAACAAAAACAGCTCATTCATCAACTCATTCAAGAAAATGAACATTTGCGTCA
CGAAAACAAACAGCTACGCAAAGAAAATGAACAACTGAAGTACCGTGTTCAAGAGCTGGAAGCACGCACGAAAAAAAACAGCTCCAATAGCCATTTGCCC
CCATCTTCTGACCGTTTTGAGAAAAAGCGTTCCTCCCGCGAGCCGTCTGGCAAAAAGCCTGGTGGGCAAGAGGGACATGAGGGGAAGACGCTCCGTCAAG
TGGAACATCCACATCATCGTGTCGTCCACCGTGTGCATACGTGTCAAGGATGTGGAGCTTCTTTGCGTGAAGTCAAACCGTTCAAAGTCGATATCCGTCA
AGTGTTTGATGTCCCTCCTGTGGCGATCGAGGTGACACAACATGAACGTGAAGTGAAATCGTGTCCACATTGTCGATGCGTGCAACAAGCCGAATTCCCA
TCCCATGTCACGAATCATGTGCAATACGGTCCACGGCTCACGGCGCTCGTTGTTTATTTACATCATATCCAATTGATCCCGTACAAGCGTTTAAGTGATA
CAATCGAAGCGTTATATCAACACTCGATTAGTACAGGAACCCTTGCCAATATGGTGAAACGAGGACGCGAAGCGCTGGAATCAAATATGGACATCATCGA
AGACGCCTTACTTGAATCCAACATCCTGCATGTCGATGAAACGAGTTTGCGCATCAATGGGAAACTCGCATGGGTGCATGTCGCGTGTACATCGAGATAT
ACATACTTGGCTCCTCACGCTTCTCGTGGAAAAAAAGCGACCGATGAGATCGGGATTCTTCCCCGATATGAAGGGACGATGATGCACGATGCGTTCGGTA
CGTATCCGAAATACACACATGCCACCCATGCCCTTTGTCATGCCCACCATTTGCGTGAGTTAAAAGGATTCATCGAACAGGGGCATACGTGGGCGATGCG
CATGACCACGTTTCTGTTAGCCGCCAAGCAAGCCGTCGAAGCCCATCACGGTGCACTTTCCGAAGAAGAAGCGAGACGGTGGGAACGAGTGTATGATCGC
ATCCTAGAAAGAGCACAACACCGATTAGAAACGATGACGCCTCTTCCGAAAAAAGCACTCGCTTTTGTTCGACGCCTTCAAAAACGAAAGGAAGAAGCGC
TGCGTTTCTTACGTGAAGTACATGTTCCCTTTGACAACAACCAAGCCGAACGCGATCTTCGCATGGTTAAAGTCAAAGAGAACATTTCGGGTACATTTCG
CGAAGAAACATTCGCGCAGTCGTTTTGCATCGCAAGAAGCATCGTTTCCACACTGACGAAACACGAAAAAAACGTGTGGGATTCGTTATGTCTTCTGTTG
GCAGGCGAAACGATCGATCGAGTTCTTTCCGCTACCTAGGGCATTTTCTATGACCGAAATGCCCTATTTGTGCTGGGCTTTTTTATACACTAGCACTGGG
GTGAATAGTTAC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1449 bp | 482 aa | 91 | 1539 | + | No |
Chemistry : DDE
ORF sequence :
MLTVQQAVFTVESLIGKVQQQKQLIHQLIQENEHLRHENKQLRKENEQLKYRVQELEARTKKNSSNSHLPPSSDRFEKKRSSREPSGKKPGGQEGHEGKT
LRQVEHPHHRVVHRVHTCQGCGASLREVKPFKVDIRQVFDVPPVAIEVTQHEREVKSCPHCRCVQQAEFPSHVTNHVQYGPRLTALVVYLHHIQLIPYKR
LSDTIEALYQHSISTGTLANMVKRGREALESNMDIIEDALLESNILHVDETSLRINGKLAWVHVACTSRYTYLAPHASRGKKATDEIGILPRYEGTMMHD
AFGTYPKYTHATHALCHAHHLRELKGFIEQGHTWAMRMTTFLLAAKQAVEAHHGALSEEEARRWERVYDRILERAQHRLETMTPLPKKALAFVRRLQKRK
EEALRFLREVHVPFDNNQAERDLRMVKVKENISGTFREETFAQSFCIARSIVSTLTKHEKNVWDSLCLLLAGETIDRVLSAT
LRQVEHPHHRVVHRVHTCQGCGASLREVKPFKVDIRQVFDVPPVAIEVTQHEREVKSCPHCRCVQQAEFPSHVTNHVQYGPRLTALVVYLHHIQLIPYKR
LSDTIEALYQHSISTGTLANMVKRGREALESNMDIIEDALLESNILHVDETSLRINGKLAWVHVACTSRYTYLAPHASRGKKATDEIGILPRYEGTMMHD
AFGTYPKYTHATHALCHAHHLRELKGFIEQGHTWAMRMTTFLLAAKQAVEAHHGALSEEEARRWERVYDRILERAQHRLETMTPLPKKALAFVRRLQKRK
EEALRFLREVHVPFDNNQAERDLRMVKVKENISGTFREETFAQSFCIARSIVSTLTKHEKNVWDSLCLLLAGETIDRVLSAT
Blast result :
Comments
ISBst12 is 97% aa similar to ISGst1.
References
1] Egelseer, EM, Idris, R., Jarosch, M., Sleytr, U.B. and Sara, M. (1999) Direct submission GenBank.
2] Egelseer,E.M., Idris,R., Jarosch,M., Danhorn,T., Sleytr,U.B. and Sara,M. (2000) Microbiology 146 (Pt 9), 2175-2183.
2] Egelseer,E.M., Idris,R., Jarosch,M., Danhorn,T., Sleytr,U.B. and Sara,M. (2000) Microbiology 146 (Pt 9), 2175-2183.