ISBli11
- Family ISL3
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP017150 | ND | Brevibacterium linens | Brevibacterium linens SMQ-1335 Brevibacterium linens Brevibacterium aurantiacum |
DNA section
IS Length : 1399 bp
Ends
IR Length : 29/48
IRL : GGCTCTTCATAGATAGGGCGGTGGGGAAGAGTTGAATCCGGCGTCGATGA
IRR : GGCTCTTCATAAATAGGGCTGTAGAAGAGGTCCCAGTCCTCCAGCGTGGA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
GATGACACTC | GGTTAAGG | TCCAACTATC | 8 |
DNA sequence
GGCTCTTCATAGATAGGGCGGTGGGGAAGAGTTGAATCCGGCGTCGATGACAACGGGACCCTGGGTGCAATGATGTAGGTGTTCAAGACTCCATCACGAC
CCAAGGTCCCTCGTGTACGACTTTACCCCGCCCTGCCTCGATACCACACTCTCCCTGCCGGAACTCGGACTCACCGCGATCGGGCAACACCACACTGGTC
GGCATCTGACCGTGCTGTGCCTGATCACCGACAACGACAGGTCCTGCCCTGTCTGCCGTCAACGCGGACTCGTCCGGGCCACCAGGATCCGCAAACTCGT
TCATCCCCCGATCGGCCTGACCGCGGTGACCTTGGCTATTCGCATCCGCACCTACACCTGCCCTTCCTGCCACCAGCGCTGGTCCCAAACACCCCAGCGA
GCCTGCGCCGGCAGATCGAAACTCTCGACGACAGCACGCTTGTGGGCATTGAAGTCCGTGGTCATCGACAAGATGAGCATCCACGTCATCGCTAAGAACC
TCTCCACCTCCTGGAACACTGTGTGCACGGCTGTACTCGACCTCGGCCGATCTCTGCTCATCGCTGATGCCACCCGGTTCGAGGGTGTATCCACAATCGG
TGTCGATGAGCACTGCTGGTCCCACCGCGGCATCGACAGGTGGGTGACTGTCATCGTCGACCTCACCCACCGGCCAGCACGCCTGCTCGACATCGCCCCC
GGCCGCTCCGCCGACGTCTTCGCCGACTGGTTGAACAACCAGCCCGATGCTTTCCGTGACGGCATCGAGCATGTCGCTATGGATGCCTTCGCCGGCTATA
AGAAAGCTGCCACTGACGTAGTGCCTGATGCCACCACGGTCATGGACCCCTTCCACGTTGTCGCCCTCGTCGGCACGAAGCTCGATGAGACGAGGAGGCG
GCTACAAACAGAGCTGCACGGTCGCAGAGGACGGTCGGGTGATGACCTGTACGGGATCCGCAAAACGGTTCGCACCCGCGTCGGTTTGCTTACCAGCAAG
CAGAAGCACCGCCTCAACTCAGTCTTCGCCGCCGACAATCATGCTGCCCTGTTGGTGTGTTGGCAGTTCTATCAAGACACGATCGCCGCCTATGCTGCCC
CACCGAGCAAAGGTAAGAAGCTCATGAACCGACTCATCGACACCCTGACAGGAACGATTCCTGATGAGCTCAAAGAACTCCGGAGCCTGAGGACAACCTT
CCAACGTCGTCGGGCCGATATCCTGGCCTACTTCGATCATCCTGGAACCTCGAACGGGCCAACCGAAGCGATCAACGGCAGACTCGAACATCTGCGCGGT
ATCGCACTGGGGTTCCGCAACCGGGGCAACTACCTGATCCGTTCTCTGCTCCACGCTGGAGGACTGGGACCTCTTCTACAGCCCTATTTATGAAGAGCC
CCAAGGTCCCTCGTGTACGACTTTACCCCGCCCTGCCTCGATACCACACTCTCCCTGCCGGAACTCGGACTCACCGCGATCGGGCAACACCACACTGGTC
GGCATCTGACCGTGCTGTGCCTGATCACCGACAACGACAGGTCCTGCCCTGTCTGCCGTCAACGCGGACTCGTCCGGGCCACCAGGATCCGCAAACTCGT
TCATCCCCCGATCGGCCTGACCGCGGTGACCTTGGCTATTCGCATCCGCACCTACACCTGCCCTTCCTGCCACCAGCGCTGGTCCCAAACACCCCAGCGA
GCCTGCGCCGGCAGATCGAAACTCTCGACGACAGCACGCTTGTGGGCATTGAAGTCCGTGGTCATCGACAAGATGAGCATCCACGTCATCGCTAAGAACC
TCTCCACCTCCTGGAACACTGTGTGCACGGCTGTACTCGACCTCGGCCGATCTCTGCTCATCGCTGATGCCACCCGGTTCGAGGGTGTATCCACAATCGG
TGTCGATGAGCACTGCTGGTCCCACCGCGGCATCGACAGGTGGGTGACTGTCATCGTCGACCTCACCCACCGGCCAGCACGCCTGCTCGACATCGCCCCC
GGCCGCTCCGCCGACGTCTTCGCCGACTGGTTGAACAACCAGCCCGATGCTTTCCGTGACGGCATCGAGCATGTCGCTATGGATGCCTTCGCCGGCTATA
AGAAAGCTGCCACTGACGTAGTGCCTGATGCCACCACGGTCATGGACCCCTTCCACGTTGTCGCCCTCGTCGGCACGAAGCTCGATGAGACGAGGAGGCG
GCTACAAACAGAGCTGCACGGTCGCAGAGGACGGTCGGGTGATGACCTGTACGGGATCCGCAAAACGGTTCGCACCCGCGTCGGTTTGCTTACCAGCAAG
CAGAAGCACCGCCTCAACTCAGTCTTCGCCGCCGACAATCATGCTGCCCTGTTGGTGTGTTGGCAGTTCTATCAAGACACGATCGCCGCCTATGCTGCCC
CACCGAGCAAAGGTAAGAAGCTCATGAACCGACTCATCGACACCCTGACAGGAACGATTCCTGATGAGCTCAAAGAACTCCGGAGCCTGAGGACAACCTT
CCAACGTCGTCGGGCCGATATCCTGGCCTACTTCGATCATCCTGGAACCTCGAACGGGCCAACCGAAGCGATCAACGGCAGACTCGAACATCTGCGCGGT
ATCGCACTGGGGTTCCGCAACCGGGGCAACTACCTGATCCGTTCTCTGCTCCACGCTGGAGGACTGGGACCTCTTCTACAGCCCTATTTATGAAGAGCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1281 bp | 426 aa | 113 | 1393 | + | No |
Chemistry : Unknow
ORF sequence :
MYDFTPPCLDTTLSLPELGLTAIGQHHTGRHLTVLCLITDNDRSCPVCRQRGLVRATRIRKLVHPPIGLTAVTLAIRIRTYTCPSCHQRWSQTPQRACAG
RSKLSTTARLWALKSVVIDKMSIHVIAKNLSTSWNTVCTAVLDLGRSLLIADATRFEGVSTIGVDEHCWSHRGIDRWVTVIVDLTHRPARLLDIAPGRSA
DVFADWLNNQPDAFRDGIEHVAMDAFAGYKKAATDVVPDATTVMDPFHVVALVGTKLDETRRRLQTELHGRRGRSGDDLYGIRKTVRTRVGLLTSKQKHR
LNSVFAADNHAALLVCWQFYQDTIAAYAAPPSKGKKLMNRLIDTLTGTIPDELKELRSLRTTFQRRRADILAYFDHPGTSNGPTEAINGRLEHLRGIALG
FRNRGNYLIRSLLHAGGLGPLLQPYL
RSKLSTTARLWALKSVVIDKMSIHVIAKNLSTSWNTVCTAVLDLGRSLLIADATRFEGVSTIGVDEHCWSHRGIDRWVTVIVDLTHRPARLLDIAPGRSA
DVFADWLNNQPDAFRDGIEHVAMDAFAGYKKAATDVVPDATTVMDPFHVVALVGTKLDETRRRLQTELHGRRGRSGDDLYGIRKTVRTRVGLLTSKQKHR
LNSVFAADNHAALLVCWQFYQDTIAAYAAPPSKGKKLMNRLIDTLTGTIPDELKELRSLRTTFQRRRADILAYFDHPGTSNGPTEAINGRLEHLRGIALG
FRNRGNYLIRSLLHAGGLGPLLQPYL
Blast result :
Comments
ISBli11 is 92% aa similar to ISBli3.
References
1] Sebastien Levesque (2017) Direct submission.
2] de Melo,A.G., Labrie,S.J., Dumaresq,J., Roberts,R.J., Tremblay,D.M. and Moineau,S. (2016) Direct GenBank submission.
2] de Melo,A.G., Labrie,S.J., Dumaresq,J., Roberts,R.J., Tremblay,D.M. and Moineau,S. (2016) Direct GenBank submission.