ISBli11

  • Family ISL3
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
CP017150 ND Brevibacterium linens
Brevibacterium linens SMQ-1335
Brevibacterium linens
Brevibacterium aurantiacum
DNA section
IS Length : 1399 bp

Ends


IR Length : 29/48

IRL : GGCTCTTCATAGATAGGGCGGTGGGGAAGAGTTGAATCCGGCGTCGATGA
IRR : GGCTCTTCATAAATAGGGCTGTAGAAGAGGTCCCAGTCCTCCAGCGTGGA

Insertion site


Left flankDirect repeatRight flankDR Length
GATGACACTCGGTTAAGGTCCAACTATC8

DNA sequence

GGCTCTTCATAGATAGGGCGGTGGGGAAGAGTTGAATCCGGCGTCGATGACAACGGGACCCTGGGTGCAATGATGTAGGTGTTCAAGACTCCATCACGAC
CCAAGGTCCCTCGTGTACGACTTTACCCCGCCCTGCCTCGATACCACACTCTCCCTGCCGGAACTCGGACTCACCGCGATCGGGCAACACCACACTGGTC
GGCATCTGACCGTGCTGTGCCTGATCACCGACAACGACAGGTCCTGCCCTGTCTGCCGTCAACGCGGACTCGTCCGGGCCACCAGGATCCGCAAACTCGT
TCATCCCCCGATCGGCCTGACCGCGGTGACCTTGGCTATTCGCATCCGCACCTACACCTGCCCTTCCTGCCACCAGCGCTGGTCCCAAACACCCCAGCGA
GCCTGCGCCGGCAGATCGAAACTCTCGACGACAGCACGCTTGTGGGCATTGAAGTCCGTGGTCATCGACAAGATGAGCATCCACGTCATCGCTAAGAACC
TCTCCACCTCCTGGAACACTGTGTGCACGGCTGTACTCGACCTCGGCCGATCTCTGCTCATCGCTGATGCCACCCGGTTCGAGGGTGTATCCACAATCGG
TGTCGATGAGCACTGCTGGTCCCACCGCGGCATCGACAGGTGGGTGACTGTCATCGTCGACCTCACCCACCGGCCAGCACGCCTGCTCGACATCGCCCCC
GGCCGCTCCGCCGACGTCTTCGCCGACTGGTTGAACAACCAGCCCGATGCTTTCCGTGACGGCATCGAGCATGTCGCTATGGATGCCTTCGCCGGCTATA
AGAAAGCTGCCACTGACGTAGTGCCTGATGCCACCACGGTCATGGACCCCTTCCACGTTGTCGCCCTCGTCGGCACGAAGCTCGATGAGACGAGGAGGCG
GCTACAAACAGAGCTGCACGGTCGCAGAGGACGGTCGGGTGATGACCTGTACGGGATCCGCAAAACGGTTCGCACCCGCGTCGGTTTGCTTACCAGCAAG
CAGAAGCACCGCCTCAACTCAGTCTTCGCCGCCGACAATCATGCTGCCCTGTTGGTGTGTTGGCAGTTCTATCAAGACACGATCGCCGCCTATGCTGCCC
CACCGAGCAAAGGTAAGAAGCTCATGAACCGACTCATCGACACCCTGACAGGAACGATTCCTGATGAGCTCAAAGAACTCCGGAGCCTGAGGACAACCTT
CCAACGTCGTCGGGCCGATATCCTGGCCTACTTCGATCATCCTGGAACCTCGAACGGGCCAACCGAAGCGATCAACGGCAGACTCGAACATCTGCGCGGT
ATCGCACTGGGGTTCCGCAACCGGGGCAACTACCTGATCCGTTCTCTGCTCCACGCTGGAGGACTGGGACCTCTTCTACAGCCCTATTTATGAAGAGCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1281 bp426 aa1131393+No
ORF function : Transposase
Chemistry : Unknow

ORF sequence :

MYDFTPPCLDTTLSLPELGLTAIGQHHTGRHLTVLCLITDNDRSCPVCRQRGLVRATRIRKLVHPPIGLTAVTLAIRIRTYTCPSCHQRWSQTPQRACAG
RSKLSTTARLWALKSVVIDKMSIHVIAKNLSTSWNTVCTAVLDLGRSLLIADATRFEGVSTIGVDEHCWSHRGIDRWVTVIVDLTHRPARLLDIAPGRSA
DVFADWLNNQPDAFRDGIEHVAMDAFAGYKKAATDVVPDATTVMDPFHVVALVGTKLDETRRRLQTELHGRRGRSGDDLYGIRKTVRTRVGLLTSKQKHR
LNSVFAADNHAALLVCWQFYQDTIAAYAAPPSKGKKLMNRLIDTLTGTIPDELKELRSLRTTFQRRRADILAYFDHPGTSNGPTEAINGRLEHLRGIALG
FRNRGNYLIRSLLHAGGLGPLLQPYL

 

Blast result :
Comments
ISBli11 is 92% aa similar to ISBli3.
References
1] Sebastien Levesque (2017) Direct submission.
2] de Melo,A.G., Labrie,S.J., Dumaresq,J., Roberts,R.J., Tremblay,D.M. and Moineau,S. (2016) Direct GenBank submission.