ISBli9
- Family IS1634
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP017150 | ND | Brevibacterium linens | Brevibacterium linens SMQ-1335 Brevibacterium linens Brevibacterium aurantiacum |
DNA section
IS Length : 1704 bp
Ends
IR Length : 18/20
IRL : CCTGACTTGCTTCACTTTGGCCGATTGTGAATGATTCGACGGCATACCTC
IRR : CCTGAGTTGCTTCACTTTAGTGCCCCGGCCCGGGCCCGAAACTTTCGACG
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CAAAGCTTCAAATACTCACA | AGACCGGCAGTCACAACATG | 0 |
DNA sequence
CCTGACTTGCTTCACTTTGGCCGATTGTGAATGATTCGACGGCATACCTCCTGGTGACCGGACTGTATGTAGGGAATTTGGGACACTAATCGGGTCCGTA
GAATGAAGGCATGAGCCTGCGACTGAGGAAAGTCCCGACCGCATCTGGGGCAACCGCGGTCCAGATCGTGACGAAACGCCACGGCAAACTCACCGTCATC
GAACACCTCGGCTCCGCTCACACCCCAGCCCAACTCGCAGCACTCGAAGAAGCCGGCCGGGAAAAGATCAACGAGTCCACCGGACAACTAGCCCTCGACC
TCGACACCGGCGGCAACGTCTCGACAACGTCGCGTCGGCGAGTGAAGGGATCAGCATCACGGCTGCTCATTGACACGATCCGCACCGCCTACGACAGACT
CGGCTTCGACGTGGTCGATGACGAAGCATTCTTCCAGCTCGTCCTCGCAAGGCTTGTCGAACCCACGTCGAAGACTGACAGCATCCGTGTCCTCGACGAA
CTTGGTGCTGATGCCAAACACCGCAGCACTTTCACCCGGTGTCTGCAACGGATCAATTCTGACGCCTATCGAGAGACCATTGCAGGCAAGTGCTTCGACT
ACTCTGTCGCGACGACCGGGATCTCGCTGATCCTTTATGACGTGACCACCTTATATTTTGAAGCAGAGAAGGAAGACAGGCTCCGCAAGGTCGGGTACTC
CAAGGAACGCCGCGTCGATCCACAGATCGTGGTCGGCCTCCTCGTCGATCGGACCGGATTTCCGTTAGAGATCGGGTGCTTCGAAGGCAACAAGGCAGAA
ACGTTCACGATGATTCCGATCGTCAAGGGTTTCCAAAACCGCCACGGCGTCACGGACATGGTCATCGTTGCTGATGCCGGGATGCTCTCAGCCGCGAACC
TCAAGGAACTCGATGATGCCGGGCTACGGTTCATCGTCGGTTCGCGGCAGACGAAAGCACCGAATGATCTGGCGACGTTCTTCACCTGGAACGGCACCAA
CACTGATGATGGGCAGCTCGTCGATACGCTGACCCCAAGGGCCACAGTCGGGTTGGATAAGAACCGGACGCTGACTCGTGCTGAGCCCGTGTGGTCACCG
GTTGAGCATCCGAAGGCGTGGCGGGCAGTGTGGCAATACCGGCGCAAACGCGCTGTGCGGGACAGGGAAACACTGAATCTGCAGCGTAATCGGGCGATGC
GGATCATTGATGGGGAGTCGAAGCCGAAGGCCGCACGGTTCGTGAAGACGAAGGGGTCGACGAAGGTCTTCGACGAGTCCAGCTATGACAAGGCGGTGGG
TTTGGCCGGGTGGAAGGGGTACGTCACGAACATCGAGGCCAAGGTCATGACGGCGCGGGAGGTCGTGGGTTCTTATCATGATCTATGGCATGTCGAGCAG
TCTTTTCGGATGTCGAAGACCGACCTTCGAGCCCGTCCGATCTTTCATCGCACACGGGATGCGATTGAGGCGCACTTGACGGTCGTGTTCACGGCGTTGG
CTCTCGCGCGGTTCATGCAAGAGGCCACAGGGTTGTCGTTGAAGAAGGTCATCACCACGTTGCGGCCGTTGAGGGAGTTCGTGGGTGAGATCGATGGGCA
CGAGCTCGTGTTCCCACCCGAAGTCCCGCCAAACGTTGCCGAGCTAATTAGCAGCGTCGAAAGTTTCGGGCCCGGGCCGGGGCACTAAAGTGAAGCAACT
CAGG
GAATGAAGGCATGAGCCTGCGACTGAGGAAAGTCCCGACCGCATCTGGGGCAACCGCGGTCCAGATCGTGACGAAACGCCACGGCAAACTCACCGTCATC
GAACACCTCGGCTCCGCTCACACCCCAGCCCAACTCGCAGCACTCGAAGAAGCCGGCCGGGAAAAGATCAACGAGTCCACCGGACAACTAGCCCTCGACC
TCGACACCGGCGGCAACGTCTCGACAACGTCGCGTCGGCGAGTGAAGGGATCAGCATCACGGCTGCTCATTGACACGATCCGCACCGCCTACGACAGACT
CGGCTTCGACGTGGTCGATGACGAAGCATTCTTCCAGCTCGTCCTCGCAAGGCTTGTCGAACCCACGTCGAAGACTGACAGCATCCGTGTCCTCGACGAA
CTTGGTGCTGATGCCAAACACCGCAGCACTTTCACCCGGTGTCTGCAACGGATCAATTCTGACGCCTATCGAGAGACCATTGCAGGCAAGTGCTTCGACT
ACTCTGTCGCGACGACCGGGATCTCGCTGATCCTTTATGACGTGACCACCTTATATTTTGAAGCAGAGAAGGAAGACAGGCTCCGCAAGGTCGGGTACTC
CAAGGAACGCCGCGTCGATCCACAGATCGTGGTCGGCCTCCTCGTCGATCGGACCGGATTTCCGTTAGAGATCGGGTGCTTCGAAGGCAACAAGGCAGAA
ACGTTCACGATGATTCCGATCGTCAAGGGTTTCCAAAACCGCCACGGCGTCACGGACATGGTCATCGTTGCTGATGCCGGGATGCTCTCAGCCGCGAACC
TCAAGGAACTCGATGATGCCGGGCTACGGTTCATCGTCGGTTCGCGGCAGACGAAAGCACCGAATGATCTGGCGACGTTCTTCACCTGGAACGGCACCAA
CACTGATGATGGGCAGCTCGTCGATACGCTGACCCCAAGGGCCACAGTCGGGTTGGATAAGAACCGGACGCTGACTCGTGCTGAGCCCGTGTGGTCACCG
GTTGAGCATCCGAAGGCGTGGCGGGCAGTGTGGCAATACCGGCGCAAACGCGCTGTGCGGGACAGGGAAACACTGAATCTGCAGCGTAATCGGGCGATGC
GGATCATTGATGGGGAGTCGAAGCCGAAGGCCGCACGGTTCGTGAAGACGAAGGGGTCGACGAAGGTCTTCGACGAGTCCAGCTATGACAAGGCGGTGGG
TTTGGCCGGGTGGAAGGGGTACGTCACGAACATCGAGGCCAAGGTCATGACGGCGCGGGAGGTCGTGGGTTCTTATCATGATCTATGGCATGTCGAGCAG
TCTTTTCGGATGTCGAAGACCGACCTTCGAGCCCGTCCGATCTTTCATCGCACACGGGATGCGATTGAGGCGCACTTGACGGTCGTGTTCACGGCGTTGG
CTCTCGCGCGGTTCATGCAAGAGGCCACAGGGTTGTCGTTGAAGAAGGTCATCACCACGTTGCGGCCGTTGAGGGAGTTCGTGGGTGAGATCGATGGGCA
CGAGCTCGTGTTCCCACCCGAAGTCCCGCCAAACGTTGCCGAGCTAATTAGCAGCGTCGAAAGTTTCGGGCCCGGGCCGGGGCACTAAAGTGAAGCAACT
CAGG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1578 bp | 525 aa | 111 | 1688 | + | No |
Chemistry : DDE
ORF sequence :
MSLRLRKVPTASGATAVQIVTKRHGKLTVIEHLGSAHTPAQLAALEEAGREKINESTGQLALDLDTGGNVSTTSRRRVKGSASRLLIDTIRTAYDRLGFD
VVDDEAFFQLVLARLVEPTSKTDSIRVLDELGADAKHRSTFTRCLQRINSDAYRETIAGKCFDYSVATTGISLILYDVTTLYFEAEKEDRLRKVGYSKER
RVDPQIVVGLLVDRTGFPLEIGCFEGNKAETFTMIPIVKGFQNRHGVTDMVIVADAGMLSAANLKELDDAGLRFIVGSRQTKAPNDLATFFTWNGTNTDD
GQLVDTLTPRATVGLDKNRTLTRAEPVWSPVEHPKAWRAVWQYRRKRAVRDRETLNLQRNRAMRIIDGESKPKAARFVKTKGSTKVFDESSYDKAVGLAG
WKGYVTNIEAKVMTAREVVGSYHDLWHVEQSFRMSKTDLRARPIFHRTRDAIEAHLTVVFTALALARFMQEATGLSLKKVITTLRPLREFVGEIDGHELV
FPPEVPPNVAELISSVESFGPGPGH
VVDDEAFFQLVLARLVEPTSKTDSIRVLDELGADAKHRSTFTRCLQRINSDAYRETIAGKCFDYSVATTGISLILYDVTTLYFEAEKEDRLRKVGYSKER
RVDPQIVVGLLVDRTGFPLEIGCFEGNKAETFTMIPIVKGFQNRHGVTDMVIVADAGMLSAANLKELDDAGLRFIVGSRQTKAPNDLATFFTWNGTNTDD
GQLVDTLTPRATVGLDKNRTLTRAEPVWSPVEHPKAWRAVWQYRRKRAVRDRETLNLQRNRAMRIIDGESKPKAARFVKTKGSTKVFDESSYDKAVGLAG
WKGYVTNIEAKVMTAREVVGSYHDLWHVEQSFRMSKTDLRARPIFHRTRDAIEAHLTVVFTALALARFMQEATGLSLKKVITTLRPLREFVGEIDGHELV
FPPEVPPNVAELISSVESFGPGPGH
Blast result :
Comments
ISBli9 is 64% aa similar to ISMsm6.
References
1] Sebastien Levesque (2017) Direct submission.
2] de Melo,A.G., Labrie,S.J., Dumaresq,J., Roberts,R.J., Tremblay,D.M. and Moineau,S. (2016) Direct GenBank submission.
2] de Melo,A.G., Labrie,S.J., Dumaresq,J., Roberts,R.J., Tremblay,D.M. and Moineau,S. (2016) Direct GenBank submission.