ISBli9

  • Family IS1634
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
CP017150 ND Brevibacterium linens
Brevibacterium linens SMQ-1335
Brevibacterium linens
Brevibacterium aurantiacum
DNA section
IS Length : 1704 bp

Ends


IR Length : 18/20

IRL : CCTGACTTGCTTCACTTTGGCCGATTGTGAATGATTCGACGGCATACCTC
IRR : CCTGAGTTGCTTCACTTTAGTGCCCCGGCCCGGGCCCGAAACTTTCGACG

Insertion site


Left flankDirect repeatRight flankDR Length
CAAAGCTTCAAATACTCACAAGACCGGCAGTCACAACATG0

DNA sequence

CCTGACTTGCTTCACTTTGGCCGATTGTGAATGATTCGACGGCATACCTCCTGGTGACCGGACTGTATGTAGGGAATTTGGGACACTAATCGGGTCCGTA
GAATGAAGGCATGAGCCTGCGACTGAGGAAAGTCCCGACCGCATCTGGGGCAACCGCGGTCCAGATCGTGACGAAACGCCACGGCAAACTCACCGTCATC
GAACACCTCGGCTCCGCTCACACCCCAGCCCAACTCGCAGCACTCGAAGAAGCCGGCCGGGAAAAGATCAACGAGTCCACCGGACAACTAGCCCTCGACC
TCGACACCGGCGGCAACGTCTCGACAACGTCGCGTCGGCGAGTGAAGGGATCAGCATCACGGCTGCTCATTGACACGATCCGCACCGCCTACGACAGACT
CGGCTTCGACGTGGTCGATGACGAAGCATTCTTCCAGCTCGTCCTCGCAAGGCTTGTCGAACCCACGTCGAAGACTGACAGCATCCGTGTCCTCGACGAA
CTTGGTGCTGATGCCAAACACCGCAGCACTTTCACCCGGTGTCTGCAACGGATCAATTCTGACGCCTATCGAGAGACCATTGCAGGCAAGTGCTTCGACT
ACTCTGTCGCGACGACCGGGATCTCGCTGATCCTTTATGACGTGACCACCTTATATTTTGAAGCAGAGAAGGAAGACAGGCTCCGCAAGGTCGGGTACTC
CAAGGAACGCCGCGTCGATCCACAGATCGTGGTCGGCCTCCTCGTCGATCGGACCGGATTTCCGTTAGAGATCGGGTGCTTCGAAGGCAACAAGGCAGAA
ACGTTCACGATGATTCCGATCGTCAAGGGTTTCCAAAACCGCCACGGCGTCACGGACATGGTCATCGTTGCTGATGCCGGGATGCTCTCAGCCGCGAACC
TCAAGGAACTCGATGATGCCGGGCTACGGTTCATCGTCGGTTCGCGGCAGACGAAAGCACCGAATGATCTGGCGACGTTCTTCACCTGGAACGGCACCAA
CACTGATGATGGGCAGCTCGTCGATACGCTGACCCCAAGGGCCACAGTCGGGTTGGATAAGAACCGGACGCTGACTCGTGCTGAGCCCGTGTGGTCACCG
GTTGAGCATCCGAAGGCGTGGCGGGCAGTGTGGCAATACCGGCGCAAACGCGCTGTGCGGGACAGGGAAACACTGAATCTGCAGCGTAATCGGGCGATGC
GGATCATTGATGGGGAGTCGAAGCCGAAGGCCGCACGGTTCGTGAAGACGAAGGGGTCGACGAAGGTCTTCGACGAGTCCAGCTATGACAAGGCGGTGGG
TTTGGCCGGGTGGAAGGGGTACGTCACGAACATCGAGGCCAAGGTCATGACGGCGCGGGAGGTCGTGGGTTCTTATCATGATCTATGGCATGTCGAGCAG
TCTTTTCGGATGTCGAAGACCGACCTTCGAGCCCGTCCGATCTTTCATCGCACACGGGATGCGATTGAGGCGCACTTGACGGTCGTGTTCACGGCGTTGG
CTCTCGCGCGGTTCATGCAAGAGGCCACAGGGTTGTCGTTGAAGAAGGTCATCACCACGTTGCGGCCGTTGAGGGAGTTCGTGGGTGAGATCGATGGGCA
CGAGCTCGTGTTCCCACCCGAAGTCCCGCCAAACGTTGCCGAGCTAATTAGCAGCGTCGAAAGTTTCGGGCCCGGGCCGGGGCACTAAAGTGAAGCAACT
CAGG
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1578 bp525 aa1111688+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MSLRLRKVPTASGATAVQIVTKRHGKLTVIEHLGSAHTPAQLAALEEAGREKINESTGQLALDLDTGGNVSTTSRRRVKGSASRLLIDTIRTAYDRLGFD
VVDDEAFFQLVLARLVEPTSKTDSIRVLDELGADAKHRSTFTRCLQRINSDAYRETIAGKCFDYSVATTGISLILYDVTTLYFEAEKEDRLRKVGYSKER
RVDPQIVVGLLVDRTGFPLEIGCFEGNKAETFTMIPIVKGFQNRHGVTDMVIVADAGMLSAANLKELDDAGLRFIVGSRQTKAPNDLATFFTWNGTNTDD
GQLVDTLTPRATVGLDKNRTLTRAEPVWSPVEHPKAWRAVWQYRRKRAVRDRETLNLQRNRAMRIIDGESKPKAARFVKTKGSTKVFDESSYDKAVGLAG
WKGYVTNIEAKVMTAREVVGSYHDLWHVEQSFRMSKTDLRARPIFHRTRDAIEAHLTVVFTALALARFMQEATGLSLKKVITTLRPLREFVGEIDGHELV
FPPEVPPNVAELISSVESFGPGPGH

 

Blast result :
Comments
ISBli9 is 64% aa similar to ISMsm6.
References
1] Sebastien Levesque (2017) Direct submission.
2] de Melo,A.G., Labrie,S.J., Dumaresq,J., Roberts,R.J., Tremblay,D.M. and Moineau,S. (2016) Direct GenBank submission.