ISStin10

  • Family IS200/IS605
  • Group IS200
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
CP017952 ND Streptococcus iniae
Streptococcus iniae 89353
Streptococcus iniae YSFST01-82
Streptococcus iniae ISNO
Streptococcus iniae ISET0901
Streptococcus iniae SF1
Streptococcus iniae
DNA section
IS Length : 758 bp

Ends


Left end : TTTATGTGACTTTTAGTCCGTTTCACTCCGAAGGTGTGAAACAAAAAACCACCCGCTATGCGGGTGTGCATCAAAGGTTATACCCAAAAGACTCCTAACG II struct. : No
Right end : AAGGCTTGAACAAAGTGAAAGCCAGCGCCTTTAGACGCTGGCTTGTATTCTGGGCTTATAGCCCTTGTTCAAACCACCCGTTAGACGGGTGGTTATGATT II struct. : No

Insertion site


Left flankLE cleavage siteRight flankRE cleavage site
TATAGAGGCTTCTTTTTAGAGTTTAAGCAAGCGATT

DNA sequence

TTTATGTGACTTTTAGTCCGTTTCACTCCGAAGGTGTGAAACAAAAAACCACCCGCTATGCGGGTGTGCATCAAAGGTTATACCCAAAAGACTCCTAACG
CGGTCCAATATAGGTGTTCAAGCCAATTGTAAAGCGAAAGGAGTCGAAATATGGCACAGAAGGCACATAGCTTATCACACACAAAGTGGATGTGTAAATA
TCACATTGTGTTCACCCCTAAGTATAGACGAAAAATAATCTATAATCAATACAGAAGTAGTCTCGGTGAGATTTTTCAGAGACTGTGTAGCTATAAAGGT
GTAGAAATAATTGAAGGTCATTTGATGCCAGACCATGTCCACATGTTGGTAAGTATTCCCCCAAGAATTAGTGTTTCAAGTTTTATGGGATATTTAAAAG
GAAAAAGCGCACTCATGATGTTTGATAAACACGCCAATCTCAAATATAAGTTTGGTAATCGACATTTTTGGGCTGAAGGTTATTATGTAAGTACAGTTGG
ATTGAATGAAGCCACAATAAAAAAATACATACAAGATCAAGAGAAACATGATATAGCAGTGGATAAATTAAGTGTAAAAGAATATGAAGATCCCTTTAGG
GATAGTGGCAAGTAATACAAAGGCCTCTTTGAGAGGCAAGTGACGAGTCAAGAGCAATAAGGCTTGAACAAAGTGAAAGCCAGCGCCTTTAGACGCTGGC
TTGTATTCTGGGCTTATAGCCCTTGTTCAAACCACCCGTTAGACGGGTGGTTATGATT
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
465 bp154 aa151615+No
ORF function : Transposase
Chemistry : Y1

ORF sequence :

MAQKAHSLSHTKWMCKYHIVFTPKYRRKIIYNQYRSSLGEIFQRLCSYKGVEIIEGHLMPDHVHMLVSIPPRISVSSFMGYLKGKSALMMFDKHANLKYK
FGNRHFWAEGYYVSTVGLNEATIKKYIQDQEKHDIAVDKLSVKEYEDPFRDSGK

 

Blast result :
Comments
ISStin10 is 98% aa similar to ISSsu4 (but only 86% DNA identity).
References
1] Areej Alsheikh-Hussain (2017) Direct submission.
2] Gong,H.-Y., Wu,S.-H. and Chen,C.-Y. (2016) Direct GenBank submission.