ISVisp7

  • Family ISNCY
  • Group IS1202
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
KP795621 ND Vibrio splendidus
Vibrio splendidus strain FF_172
DNA section
IS Length : 1742 bp

Ends


IR Length : 16/24

IRL : TGTGATCACCAAGCGATTCTGTCGTACCTTAATTACCAAGCGACTTTGTC
IRR : TGTCATTACTGAGGGATCTTGACGGTATAAGTACCAATCGATTCTGTCAT

Insertion site


Left flankDirect repeatRight flankDR Length
AAAAATGAGCTCCGCCAAGTTAGAACGTTTAAAAATTCCCATT16

DNA sequence

TGTGATCACCAAGCGATTCTGTCGTACCTTAATTACCAAGCGACTTTGTCATTACAATAACTACCGAGGGATTTTGACGGGACTAAATTGGCTTACCTTT
TAAAGTAATTAATTAAACTTTAGAAGGGGCTAAGGATGTTCTATATGGATTCTAAATCCCAGTTTACTGTCGATATCATTTGCAAAATTATCGAGGGTAA
AATCAGTATCAATAGTGCCACTACCTTGCTCAACAAGTCTCGGCGAACTGTTGAACGTTATCTAAGCCGATATCGGAAAGAAGGTATTCGCTTCATCATT
CATGGCAATCAGGGGCGTTCTCCAGTCAATAAGATCCCTGATTCGCTCAAGAAAGAAGTCCAAAGCCTCATACAAACTAAGTACTTCGATTTCAATTTGC
AGCATCTCTCTGAAGTCCTCAAAAAGAACGAAGGGATCGCTATTAAGCGTGAAACATTACGCTCTTGGGCACACGATATCCATCATGTTAAACGTGCTAA
GCGACGCAGAACTCGCGTCAGGAAGTATCGGGAGCGTATGGAATTACCTGGATTAATGCTTCAAATGGATGGGAGCCCTCATCGCTGGTTTGGTGATGAG
AAATCTTGTTTGATTGCTATGATTGATGACGCTACCAGTGATATTCACGCTCAGTTTTTCCCCTCTGAGACCACCGAAGGCTGTATGAGGGTGATGAGAG
CCTATATTGAGAAACGAGGAATATTTAAGACGCTCTACGTCGATAGAGCGGGTATCTTCGGTGGCCCCAAACGAAGCAACTTCTCCCAGATGCAACGAGC
TTGTGAGGAGCTTGGAATTGAAATTATCTTTGCTAACTCACCACAAGGAAAGGGACGCATTGAACGCTCATTCGATACCTTCCAAGATAGGCTTGTACCA
GAACTACGACTGCACAACATTACCGATATGGAAGGCGCGAATCGTTATTTACAAGAAGAGTTCATACCCAATTATTGGGATGAAAATGTTCGTGTTCAGC
CCAAAAGTTCACGGTCTGCCTTTAAGCGCTTACCGCCCGATTTAGACCTCAACAGCATCTGCGTACAGAAAGAGTATCGAACCATACGACGTGATCATAC
GTTTGGCTTTGGTAACAAAAGGTATATTATAGACTCGCCTATCCGCTATTCCATTGAAAACCAAAAAGTAGAGATTAGATGCCAGTTCGATGGCACATTC
TCCGTCTATTTTGGGCACCGTAGGCTAGATATTACCGAGCTGGTTGAGCCTCGTAAATGCAATGAATACGGTAAAGAGGTTCAGCGGAAAATAGAAGCCT
TAGAGCTAGTAGAACAGTTGGGTAGTATATCTAAAGCAGCCCGTATCCTTGGTTGTTCTCGCCAATCCCTTTACACCTATCAGAAAATAATGGCAGAGGA
AGGGCCTATGGGGCTGAAGCGGATCAATAAGCCCCTGAACCGCAGTAAGAATCGCATACCAGAGTATGCAGAAGACAAGATTATTGAGCTGACGTTGCAG
AACCCACACCTGACTTTGATGCAACTCACGATGGAGCTAAAACAACACAATATCAATGTGAGTATTGGTACGATTAAAAACATCTGGAAGGAAGAAAACC
TCAGCACTAGAGAACTTAGGATTAAAAAATCACAATCACTGAATATCGACGTGTAAGGCGAAAAGTATCAACCCTGACTAGAATGTAAGAGCATGACAGA
ATCGATTGGTACTTATACCGTCAAGATCCCTCAGTAATGACA
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1521 bp506 aa1361656+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MFYMDSKSQFTVDIICKIIEGKISINSATTLLNKSRRTVERYLSRYRKEGIRFIIHGNQGRSPVNKIPDSLKKEVQSLIQTKYFDFNLQHLSEVLKKNEG
IAIKRETLRSWAHDIHHVKRAKRRRTRVRKYRERMELPGLMLQMDGSPHRWFGDEKSCLIAMIDDATSDIHAQFFPSETTEGCMRVMRAYIEKRGIFKTL
YVDRAGIFGGPKRSNFSQMQRACEELGIEIIFANSPQGKGRIERSFDTFQDRLVPELRLHNITDMEGANRYLQEEFIPNYWDENVRVQPKSSRSAFKRLP
PDLDLNSICVQKEYRTIRRDHTFGFGNKRYIIDSPIRYSIENQKVEIRCQFDGTFSVYFGHRRLDITELVEPRKCNEYGKEVQRKIEALELVEQLGSISK
AARILGCSRQSLYTYQKIMAEEGPMGLKRINKPLNRSKNRIPEYAEDKIIELTLQNPHLTLMQLTMELKQHNINVSIGTIKNIWKEENLSTRELRIKKSQ
SLNIDV

 

Blast result :
Comments
ISVisp7 is 87% aa similar to ISShha1.
References
1] ISfinder (2017) Direct submission
2] Xue,H., Cordero,O.X., Camas,F.M., Trimble,W., Meyer,F., Guglielmini,J., Rocha,E.P. and Polz,M.F. (2015) MBio 6 (3), e00552-15