ISVisp7
- Family ISNCY
- Group IS1202
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
KP795621 | ND | Vibrio splendidus | Vibrio splendidus strain FF_172 |
DNA section
IS Length : 1742 bp
Ends
IR Length : 16/24
IRL : TGTGATCACCAAGCGATTCTGTCGTACCTTAATTACCAAGCGACTTTGTC
IRR : TGTCATTACTGAGGGATCTTGACGGTATAAGTACCAATCGATTCTGTCAT
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
AAAAATGAGCTCCG | CCAAGTTAGAACGTTT | AAAAATTCCCATT | 16 |
DNA sequence
TGTGATCACCAAGCGATTCTGTCGTACCTTAATTACCAAGCGACTTTGTCATTACAATAACTACCGAGGGATTTTGACGGGACTAAATTGGCTTACCTTT
TAAAGTAATTAATTAAACTTTAGAAGGGGCTAAGGATGTTCTATATGGATTCTAAATCCCAGTTTACTGTCGATATCATTTGCAAAATTATCGAGGGTAA
AATCAGTATCAATAGTGCCACTACCTTGCTCAACAAGTCTCGGCGAACTGTTGAACGTTATCTAAGCCGATATCGGAAAGAAGGTATTCGCTTCATCATT
CATGGCAATCAGGGGCGTTCTCCAGTCAATAAGATCCCTGATTCGCTCAAGAAAGAAGTCCAAAGCCTCATACAAACTAAGTACTTCGATTTCAATTTGC
AGCATCTCTCTGAAGTCCTCAAAAAGAACGAAGGGATCGCTATTAAGCGTGAAACATTACGCTCTTGGGCACACGATATCCATCATGTTAAACGTGCTAA
GCGACGCAGAACTCGCGTCAGGAAGTATCGGGAGCGTATGGAATTACCTGGATTAATGCTTCAAATGGATGGGAGCCCTCATCGCTGGTTTGGTGATGAG
AAATCTTGTTTGATTGCTATGATTGATGACGCTACCAGTGATATTCACGCTCAGTTTTTCCCCTCTGAGACCACCGAAGGCTGTATGAGGGTGATGAGAG
CCTATATTGAGAAACGAGGAATATTTAAGACGCTCTACGTCGATAGAGCGGGTATCTTCGGTGGCCCCAAACGAAGCAACTTCTCCCAGATGCAACGAGC
TTGTGAGGAGCTTGGAATTGAAATTATCTTTGCTAACTCACCACAAGGAAAGGGACGCATTGAACGCTCATTCGATACCTTCCAAGATAGGCTTGTACCA
GAACTACGACTGCACAACATTACCGATATGGAAGGCGCGAATCGTTATTTACAAGAAGAGTTCATACCCAATTATTGGGATGAAAATGTTCGTGTTCAGC
CCAAAAGTTCACGGTCTGCCTTTAAGCGCTTACCGCCCGATTTAGACCTCAACAGCATCTGCGTACAGAAAGAGTATCGAACCATACGACGTGATCATAC
GTTTGGCTTTGGTAACAAAAGGTATATTATAGACTCGCCTATCCGCTATTCCATTGAAAACCAAAAAGTAGAGATTAGATGCCAGTTCGATGGCACATTC
TCCGTCTATTTTGGGCACCGTAGGCTAGATATTACCGAGCTGGTTGAGCCTCGTAAATGCAATGAATACGGTAAAGAGGTTCAGCGGAAAATAGAAGCCT
TAGAGCTAGTAGAACAGTTGGGTAGTATATCTAAAGCAGCCCGTATCCTTGGTTGTTCTCGCCAATCCCTTTACACCTATCAGAAAATAATGGCAGAGGA
AGGGCCTATGGGGCTGAAGCGGATCAATAAGCCCCTGAACCGCAGTAAGAATCGCATACCAGAGTATGCAGAAGACAAGATTATTGAGCTGACGTTGCAG
AACCCACACCTGACTTTGATGCAACTCACGATGGAGCTAAAACAACACAATATCAATGTGAGTATTGGTACGATTAAAAACATCTGGAAGGAAGAAAACC
TCAGCACTAGAGAACTTAGGATTAAAAAATCACAATCACTGAATATCGACGTGTAAGGCGAAAAGTATCAACCCTGACTAGAATGTAAGAGCATGACAGA
ATCGATTGGTACTTATACCGTCAAGATCCCTCAGTAATGACA
TAAAGTAATTAATTAAACTTTAGAAGGGGCTAAGGATGTTCTATATGGATTCTAAATCCCAGTTTACTGTCGATATCATTTGCAAAATTATCGAGGGTAA
AATCAGTATCAATAGTGCCACTACCTTGCTCAACAAGTCTCGGCGAACTGTTGAACGTTATCTAAGCCGATATCGGAAAGAAGGTATTCGCTTCATCATT
CATGGCAATCAGGGGCGTTCTCCAGTCAATAAGATCCCTGATTCGCTCAAGAAAGAAGTCCAAAGCCTCATACAAACTAAGTACTTCGATTTCAATTTGC
AGCATCTCTCTGAAGTCCTCAAAAAGAACGAAGGGATCGCTATTAAGCGTGAAACATTACGCTCTTGGGCACACGATATCCATCATGTTAAACGTGCTAA
GCGACGCAGAACTCGCGTCAGGAAGTATCGGGAGCGTATGGAATTACCTGGATTAATGCTTCAAATGGATGGGAGCCCTCATCGCTGGTTTGGTGATGAG
AAATCTTGTTTGATTGCTATGATTGATGACGCTACCAGTGATATTCACGCTCAGTTTTTCCCCTCTGAGACCACCGAAGGCTGTATGAGGGTGATGAGAG
CCTATATTGAGAAACGAGGAATATTTAAGACGCTCTACGTCGATAGAGCGGGTATCTTCGGTGGCCCCAAACGAAGCAACTTCTCCCAGATGCAACGAGC
TTGTGAGGAGCTTGGAATTGAAATTATCTTTGCTAACTCACCACAAGGAAAGGGACGCATTGAACGCTCATTCGATACCTTCCAAGATAGGCTTGTACCA
GAACTACGACTGCACAACATTACCGATATGGAAGGCGCGAATCGTTATTTACAAGAAGAGTTCATACCCAATTATTGGGATGAAAATGTTCGTGTTCAGC
CCAAAAGTTCACGGTCTGCCTTTAAGCGCTTACCGCCCGATTTAGACCTCAACAGCATCTGCGTACAGAAAGAGTATCGAACCATACGACGTGATCATAC
GTTTGGCTTTGGTAACAAAAGGTATATTATAGACTCGCCTATCCGCTATTCCATTGAAAACCAAAAAGTAGAGATTAGATGCCAGTTCGATGGCACATTC
TCCGTCTATTTTGGGCACCGTAGGCTAGATATTACCGAGCTGGTTGAGCCTCGTAAATGCAATGAATACGGTAAAGAGGTTCAGCGGAAAATAGAAGCCT
TAGAGCTAGTAGAACAGTTGGGTAGTATATCTAAAGCAGCCCGTATCCTTGGTTGTTCTCGCCAATCCCTTTACACCTATCAGAAAATAATGGCAGAGGA
AGGGCCTATGGGGCTGAAGCGGATCAATAAGCCCCTGAACCGCAGTAAGAATCGCATACCAGAGTATGCAGAAGACAAGATTATTGAGCTGACGTTGCAG
AACCCACACCTGACTTTGATGCAACTCACGATGGAGCTAAAACAACACAATATCAATGTGAGTATTGGTACGATTAAAAACATCTGGAAGGAAGAAAACC
TCAGCACTAGAGAACTTAGGATTAAAAAATCACAATCACTGAATATCGACGTGTAAGGCGAAAAGTATCAACCCTGACTAGAATGTAAGAGCATGACAGA
ATCGATTGGTACTTATACCGTCAAGATCCCTCAGTAATGACA
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1521 bp | 506 aa | 136 | 1656 | + | No |
Chemistry : DDE
ORF sequence :
MFYMDSKSQFTVDIICKIIEGKISINSATTLLNKSRRTVERYLSRYRKEGIRFIIHGNQGRSPVNKIPDSLKKEVQSLIQTKYFDFNLQHLSEVLKKNEG
IAIKRETLRSWAHDIHHVKRAKRRRTRVRKYRERMELPGLMLQMDGSPHRWFGDEKSCLIAMIDDATSDIHAQFFPSETTEGCMRVMRAYIEKRGIFKTL
YVDRAGIFGGPKRSNFSQMQRACEELGIEIIFANSPQGKGRIERSFDTFQDRLVPELRLHNITDMEGANRYLQEEFIPNYWDENVRVQPKSSRSAFKRLP
PDLDLNSICVQKEYRTIRRDHTFGFGNKRYIIDSPIRYSIENQKVEIRCQFDGTFSVYFGHRRLDITELVEPRKCNEYGKEVQRKIEALELVEQLGSISK
AARILGCSRQSLYTYQKIMAEEGPMGLKRINKPLNRSKNRIPEYAEDKIIELTLQNPHLTLMQLTMELKQHNINVSIGTIKNIWKEENLSTRELRIKKSQ
SLNIDV
IAIKRETLRSWAHDIHHVKRAKRRRTRVRKYRERMELPGLMLQMDGSPHRWFGDEKSCLIAMIDDATSDIHAQFFPSETTEGCMRVMRAYIEKRGIFKTL
YVDRAGIFGGPKRSNFSQMQRACEELGIEIIFANSPQGKGRIERSFDTFQDRLVPELRLHNITDMEGANRYLQEEFIPNYWDENVRVQPKSSRSAFKRLP
PDLDLNSICVQKEYRTIRRDHTFGFGNKRYIIDSPIRYSIENQKVEIRCQFDGTFSVYFGHRRLDITELVEPRKCNEYGKEVQRKIEALELVEQLGSISK
AARILGCSRQSLYTYQKIMAEEGPMGLKRINKPLNRSKNRIPEYAEDKIIELTLQNPHLTLMQLTMELKQHNINVSIGTIKNIWKEENLSTRELRIKKSQ
SLNIDV
Blast result :
Comments
ISVisp7 is 87% aa similar to ISShha1.
References
1] ISfinder (2017) Direct submission
2] Xue,H., Cordero,O.X., Camas,F.M., Trimble,W., Meyer,F., Guglielmini,J., Rocha,E.P. and Polz,M.F. (2015) MBio 6 (3), e00552-15
2] Xue,H., Cordero,O.X., Camas,F.M., Trimble,W., Meyer,F., Guglielmini,J., Rocha,E.P. and Polz,M.F. (2015) MBio 6 (3), e00552-15