ISSat1
- Family IS1595
- Group ISSod11
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP014519 | ND | Sinomonas atrocyanea | Sinomonas atrocyanea KCTC 3377 pSA01 |
DNA section
IS Length : 1518 bp
Ends
IR Length : 29/33
IRL : ATTGGGTATCTGCTTAGCTGAAGTAGGCTATGTGCATGGCCGACATGTCG
IRR : ATTGGGTATCTGCTTAGCTGAAGTGCTCTCTGTCCCCGATGTCCTTGGCA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CAAATGTAGA | ACACACGT | TCGATTGCTG | 8 |
DNA sequence
ATTGGGTATCTGCTTAGCTGAAGTAGGCTATGTGCATGGCCGACATGTCGCCGCAAGTGCCTCGAGCGGGCGTGGACTACCCCAAGACGTTCGGGCAGTT
CCAGGAATGGTTCAGCACCGACGAGGCCTGCTTCGAGTACCTTGCGCGGCTGCGCTGGGCGGAGGGCTTCGTGTGCCCGAAGTGCGGCGGGCGCGAATAC
TGGCGCACTGGTGCCGGGCTGTGGATGTGCAAGGCGTGCTCACGCCGGACGTCTGTCACGGCCGGCACGATCTTCGACCGCACCCGCACGCCGTTGCGAA
CCTGGTTCGCGGCGATATGGTTCGTGACCTCACAGAAGAACGGCGTGTCCGCCCTCGGGCTGCAGCGCGTCCTCGGGTTCGGCTCGTATGAGACGGCGTG
GGCCTGGATGCACAAGCTCCGCCGCGCCATGGTCCGCCCCGACCGGGAGCTGCTCTCCGGGCTGGTCGAGGTCGACGAGAGCTTCATCGGCGGTGTCCAC
CGCGGGATGCCCGGCATCGGCCCTGACAAGATCTCGGTCCTGATCGCCGCTGAGCATCTGGACCACAACCGGATTGGGCGTATCCGCCTCGAGCCCGGGC
CGACCGACCGCAGGTTGGCCCTGGTGAAGTTCGGCCAGCGCGTCGTCGCTCCCGGCTCGACGATCCGCACCGACGGGGCCAGGCAGCTGCGGCGCTTCGC
CGACCTGGGCTACCAGCACGAGTACTTCACCCAGCTCGGCTCGGACATCCCGGCGCACGTGAACATGCCGGCGGTCCACATGGCGGCCTCGCAGCTCAAG
CGCTGGATCGACGGCACCCTCCACCAGGGCATCTCACGGGAACAGCTGGCCTACTACCTCGACGAGTTCACCTTCCGATTCAACCGCCGCACATCCACCA
GCCGCGGGCTGCTGTTCTACCGGCTCCTCCAGCAGGCCACCAACACCGACCCCGCGCCGCTGAAAGACCTCGTCATCCCCCACGACAGCTCTGGCGGCCA
GAGACCCCAGAGCACTGCACAAGGGCCGATCTGGCCCGATCAACGGCTACACGTCATCGGCAGTCAGACCAGCTGATCAGGGCCTGGGCCTGTAATCCTC
GAACTCCCAGTAGCCAAGCCGCGCGATCTTCTCACCCACGGTCGGCCAATCCGGACCCTCGACAGAGTTGATCTGATTTCGCAGGAAGTCCACTGCCACA
CCCAGATCGAGCGGTTCGACGATCAGGTGATGGCGACCCACCCGAGGGCCCTGCTCCGTGACCACACGACGCAACCACAACGGAGTGCACACGAGCACAT
CGAATGACTCCTCGCCGGGGCCGTCGGCCGGGCCAACCATCAGGCTTACCCAGACACCATCGTCGGTGGGATCCTCCGGCTCGTAAGTGTCGAGGTCGAC
GTCACTGCTGTGCGCCGATCGCAGAACTGCTCTCATAGGAGGTCAATAATGCCGAGTGCCCGTCCCCCTGCCAAGGACATCGGGGACAGAGAGCACTTCA
GCTAAGCAGATACCCAAT
CCAGGAATGGTTCAGCACCGACGAGGCCTGCTTCGAGTACCTTGCGCGGCTGCGCTGGGCGGAGGGCTTCGTGTGCCCGAAGTGCGGCGGGCGCGAATAC
TGGCGCACTGGTGCCGGGCTGTGGATGTGCAAGGCGTGCTCACGCCGGACGTCTGTCACGGCCGGCACGATCTTCGACCGCACCCGCACGCCGTTGCGAA
CCTGGTTCGCGGCGATATGGTTCGTGACCTCACAGAAGAACGGCGTGTCCGCCCTCGGGCTGCAGCGCGTCCTCGGGTTCGGCTCGTATGAGACGGCGTG
GGCCTGGATGCACAAGCTCCGCCGCGCCATGGTCCGCCCCGACCGGGAGCTGCTCTCCGGGCTGGTCGAGGTCGACGAGAGCTTCATCGGCGGTGTCCAC
CGCGGGATGCCCGGCATCGGCCCTGACAAGATCTCGGTCCTGATCGCCGCTGAGCATCTGGACCACAACCGGATTGGGCGTATCCGCCTCGAGCCCGGGC
CGACCGACCGCAGGTTGGCCCTGGTGAAGTTCGGCCAGCGCGTCGTCGCTCCCGGCTCGACGATCCGCACCGACGGGGCCAGGCAGCTGCGGCGCTTCGC
CGACCTGGGCTACCAGCACGAGTACTTCACCCAGCTCGGCTCGGACATCCCGGCGCACGTGAACATGCCGGCGGTCCACATGGCGGCCTCGCAGCTCAAG
CGCTGGATCGACGGCACCCTCCACCAGGGCATCTCACGGGAACAGCTGGCCTACTACCTCGACGAGTTCACCTTCCGATTCAACCGCCGCACATCCACCA
GCCGCGGGCTGCTGTTCTACCGGCTCCTCCAGCAGGCCACCAACACCGACCCCGCGCCGCTGAAAGACCTCGTCATCCCCCACGACAGCTCTGGCGGCCA
GAGACCCCAGAGCACTGCACAAGGGCCGATCTGGCCCGATCAACGGCTACACGTCATCGGCAGTCAGACCAGCTGATCAGGGCCTGGGCCTGTAATCCTC
GAACTCCCAGTAGCCAAGCCGCGCGATCTTCTCACCCACGGTCGGCCAATCCGGACCCTCGACAGAGTTGATCTGATTTCGCAGGAAGTCCACTGCCACA
CCCAGATCGAGCGGTTCGACGATCAGGTGATGGCGACCCACCCGAGGGCCCTGCTCCGTGACCACACGACGCAACCACAACGGAGTGCACACGAGCACAT
CGAATGACTCCTCGCCGGGGCCGTCGGCCGGGCCAACCATCAGGCTTACCCAGACACCATCGTCGGTGGGATCCTCCGGCTCGTAAGTGTCGAGGTCGAC
GTCACTGCTGTGCGCCGATCGCAGAACTGCTCTCATAGGAGGTCAATAATGCCGAGTGCCCGTCCCCCTGCCAAGGACATCGGGGACAGAGAGCACTTCA
GCTAAGCAGATACCCAAT
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1041 bp | 346 aa | 36 | 1076 | + | No |
Chemistry : DDE
ORF sequence :
MADMSPQVPRAGVDYPKTFGQFQEWFSTDEACFEYLARLRWAEGFVCPKCGGREYWRTGAGLWMCKACSRRTSVTAGTIFDRTRTPLRTWFAAIWFVTSQ
KNGVSALGLQRVLGFGSYETAWAWMHKLRRAMVRPDRELLSGLVEVDESFIGGVHRGMPGIGPDKISVLIAAEHLDHNRIGRIRLEPGPTDRRLALVKFG
QRVVAPGSTIRTDGARQLRRFADLGYQHEYFTQLGSDIPAHVNMPAVHMAASQLKRWIDGTLHQGISREQLAYYLDEFTFRFNRRTSTSRGLLFYRLLQQ
ATNTDPAPLKDLVIPHDSSGGQRPQSTAQGPIWPDQRLHVIGSQTS
KNGVSALGLQRVLGFGSYETAWAWMHKLRRAMVRPDRELLSGLVEVDESFIGGVHRGMPGIGPDKISVLIAAEHLDHNRIGRIRLEPGPTDRRLALVKFG
QRVVAPGSTIRTDGARQLRRFADLGYQHEYFTQLGSDIPAHVNMPAVHMAASQLKRWIDGTLHQGISREQLAYYLDEFTFRFNRRTSTSRGLLFYRLLQQ
ATNTDPAPLKDLVIPHDSSGGQRPQSTAQGPIWPDQRLHVIGSQTS
Blast result :
Comments
ISSat1 is 68% aa similar to ISMva1.
References
1] ISfinder annotation (2017)
2] Kim,K.M. (2016) Direct GenBank submission.
2] Kim,K.M. (2016) Direct GenBank submission.