ISBusp7

  • Family IS1595
  • Group ISSod11
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
CYGY02000107 ND Burkholderia sp.
Burkholderia sp. STM 7183
DNA section
IS Length : 1069 bp

Ends


IR Length : 21/22

IRL : AAGGGCTATCCACTTAGCACCACCTGAGAGAAAATGTCGGTGTGAGCGAA
IRR : AAGGGCTATCCACTTAGCGCCAAAATTCCACGCTGTGAAATTCAGCCCTC

Insertion site


Left flankDirect repeatRight flankDR Length
TAAGAGACAGGTATGGATATNNNN0

DNA sequence

AAGGGCTATCCACTTAGCACCACCTGAGAGAAAATGTCGGTGTGAGCGAATTCCAGCCTACCCCGACCGCCGGCGTCGACTACCCTCGGACGTGGAGCCA
GTTTGAAGACTGGTTTGTCACCGAGGAGGAGTGTGCGCGCTATCTTGAGCGGCTGCGTTGGCCGGAGGGGTTCGTCTGCCCCAGTTGCGCAACCAAACGG
GACCCGTATAGGAGCAGCCGCGGGCGCCTGATCTGCCGCACCTGCCGACATCCTGGGACAGTGACATCCGGCACGATTTTCGATAAGACACGCACGCCCT
TGAAGGTGTGGTTGGCAGCGGCGTGGCATCTGACGAGCCAGAAATCCGGAATGAGCGCTCTGGGTTTGCAGCGAGTCCTGGGGTTTGGCAGTTATCAAAC
CGCCTGGACCATCCTGCACCGTTTCCGTCGTGCGATGGTTCGGCCCGGACGGGAACGTCTCAAAGGGATCGTCGAGGTCGATCAGAGCTATCTTGCCATT
CGTGAACGACGTGACACTCCCGTGGGTAAAGGCGGAAAGAGACGGACCACCAAGGCTGTCGTGGTGATCGCCGTGGAAATTCTGGAGCCCAAAGGGTTCG
GTCGGATTCGCCTTCAACAGATTGAAGAGGAGTCGACTGCCAGTGTTGAGCCTTTCGTGCGAGCGGTCGTGGAACCCGGCTCCGTGCTGCGCACTGACGG
CGCAGCCATCTATCGGGCGTTGCAGGACGACTATCAACATGAGCGCACGGTCATCAAATCCGTGATGCCAGACGCCATTCCGGCGCACGTGCCGTTACCC
GGCGTCCATCGCGTCGCTTCACTGCTTAAGCGCTGGCTTCTCGGCACGCACCAAGGGGCGGTCAAGCCGGCCCACCTAGACCATTACCTCGACGAGTTCG
TCTTTCGCTTTAACCGACGCACGTCTCATTCCCGCGGCCTGATTTTCTACCGCCTGCTTGAACAGGCCGTTCAGACAGACCCCATCACCTACCGGCAGAT
CGCGCGAAAATCTCCCCGTGAGGGCTGAATTTCACAGCGTGGAATTTTGGCGCTAAGTGGATAGCCCTT
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
987 bp328 aa421028+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MSEFQPTPTAGVDYPRTWSQFEDWFVTEEECARYLERLRWPEGFVCPSCATKRDPYRSSRGRLICRTCRHPGTVTSGTIFDKTRTPLKVWLAAAWHLTSQ
KSGMSALGLQRVLGFGSYQTAWTILHRFRRAMVRPGRERLKGIVEVDQSYLAIRERRDTPVGKGGKRRTTKAVVVIAVEILEPKGFGRIRLQQIEEESTA
SVEPFVRAVVEPGSVLRTDGAAIYRALQDDYQHERTVIKSVMPDAIPAHVPLPGVHRVASLLKRWLLGTHQGAVKPAHLDHYLDEFVFRFNRRTSHSRGL
IFYRLLEQAVQTDPITYRQIARKSPREG

 

Blast result :
Comments
ISBusp7 is 79% aa similar to ISPosp3.
References
1] ISfinder annotation (2017)
2] Moulin, Lionel. (2015) Direct GenBank submission.