ISBusp7
- Family IS1595
- Group ISSod11
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CYGY02000107 | ND | Burkholderia sp. | Burkholderia sp. STM 7183 |
DNA section
IS Length : 1069 bp
Ends
IR Length : 21/22
IRL : AAGGGCTATCCACTTAGCACCACCTGAGAGAAAATGTCGGTGTGAGCGAA
IRR : AAGGGCTATCCACTTAGCGCCAAAATTCCACGCTGTGAAATTCAGCCCTC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
TAAGAGACAGGTATGGATAT | NNNN | 0 |
DNA sequence
AAGGGCTATCCACTTAGCACCACCTGAGAGAAAATGTCGGTGTGAGCGAATTCCAGCCTACCCCGACCGCCGGCGTCGACTACCCTCGGACGTGGAGCCA
GTTTGAAGACTGGTTTGTCACCGAGGAGGAGTGTGCGCGCTATCTTGAGCGGCTGCGTTGGCCGGAGGGGTTCGTCTGCCCCAGTTGCGCAACCAAACGG
GACCCGTATAGGAGCAGCCGCGGGCGCCTGATCTGCCGCACCTGCCGACATCCTGGGACAGTGACATCCGGCACGATTTTCGATAAGACACGCACGCCCT
TGAAGGTGTGGTTGGCAGCGGCGTGGCATCTGACGAGCCAGAAATCCGGAATGAGCGCTCTGGGTTTGCAGCGAGTCCTGGGGTTTGGCAGTTATCAAAC
CGCCTGGACCATCCTGCACCGTTTCCGTCGTGCGATGGTTCGGCCCGGACGGGAACGTCTCAAAGGGATCGTCGAGGTCGATCAGAGCTATCTTGCCATT
CGTGAACGACGTGACACTCCCGTGGGTAAAGGCGGAAAGAGACGGACCACCAAGGCTGTCGTGGTGATCGCCGTGGAAATTCTGGAGCCCAAAGGGTTCG
GTCGGATTCGCCTTCAACAGATTGAAGAGGAGTCGACTGCCAGTGTTGAGCCTTTCGTGCGAGCGGTCGTGGAACCCGGCTCCGTGCTGCGCACTGACGG
CGCAGCCATCTATCGGGCGTTGCAGGACGACTATCAACATGAGCGCACGGTCATCAAATCCGTGATGCCAGACGCCATTCCGGCGCACGTGCCGTTACCC
GGCGTCCATCGCGTCGCTTCACTGCTTAAGCGCTGGCTTCTCGGCACGCACCAAGGGGCGGTCAAGCCGGCCCACCTAGACCATTACCTCGACGAGTTCG
TCTTTCGCTTTAACCGACGCACGTCTCATTCCCGCGGCCTGATTTTCTACCGCCTGCTTGAACAGGCCGTTCAGACAGACCCCATCACCTACCGGCAGAT
CGCGCGAAAATCTCCCCGTGAGGGCTGAATTTCACAGCGTGGAATTTTGGCGCTAAGTGGATAGCCCTT
GTTTGAAGACTGGTTTGTCACCGAGGAGGAGTGTGCGCGCTATCTTGAGCGGCTGCGTTGGCCGGAGGGGTTCGTCTGCCCCAGTTGCGCAACCAAACGG
GACCCGTATAGGAGCAGCCGCGGGCGCCTGATCTGCCGCACCTGCCGACATCCTGGGACAGTGACATCCGGCACGATTTTCGATAAGACACGCACGCCCT
TGAAGGTGTGGTTGGCAGCGGCGTGGCATCTGACGAGCCAGAAATCCGGAATGAGCGCTCTGGGTTTGCAGCGAGTCCTGGGGTTTGGCAGTTATCAAAC
CGCCTGGACCATCCTGCACCGTTTCCGTCGTGCGATGGTTCGGCCCGGACGGGAACGTCTCAAAGGGATCGTCGAGGTCGATCAGAGCTATCTTGCCATT
CGTGAACGACGTGACACTCCCGTGGGTAAAGGCGGAAAGAGACGGACCACCAAGGCTGTCGTGGTGATCGCCGTGGAAATTCTGGAGCCCAAAGGGTTCG
GTCGGATTCGCCTTCAACAGATTGAAGAGGAGTCGACTGCCAGTGTTGAGCCTTTCGTGCGAGCGGTCGTGGAACCCGGCTCCGTGCTGCGCACTGACGG
CGCAGCCATCTATCGGGCGTTGCAGGACGACTATCAACATGAGCGCACGGTCATCAAATCCGTGATGCCAGACGCCATTCCGGCGCACGTGCCGTTACCC
GGCGTCCATCGCGTCGCTTCACTGCTTAAGCGCTGGCTTCTCGGCACGCACCAAGGGGCGGTCAAGCCGGCCCACCTAGACCATTACCTCGACGAGTTCG
TCTTTCGCTTTAACCGACGCACGTCTCATTCCCGCGGCCTGATTTTCTACCGCCTGCTTGAACAGGCCGTTCAGACAGACCCCATCACCTACCGGCAGAT
CGCGCGAAAATCTCCCCGTGAGGGCTGAATTTCACAGCGTGGAATTTTGGCGCTAAGTGGATAGCCCTT
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
987 bp | 328 aa | 42 | 1028 | + | No |
Chemistry : DDE
ORF sequence :
MSEFQPTPTAGVDYPRTWSQFEDWFVTEEECARYLERLRWPEGFVCPSCATKRDPYRSSRGRLICRTCRHPGTVTSGTIFDKTRTPLKVWLAAAWHLTSQ
KSGMSALGLQRVLGFGSYQTAWTILHRFRRAMVRPGRERLKGIVEVDQSYLAIRERRDTPVGKGGKRRTTKAVVVIAVEILEPKGFGRIRLQQIEEESTA
SVEPFVRAVVEPGSVLRTDGAAIYRALQDDYQHERTVIKSVMPDAIPAHVPLPGVHRVASLLKRWLLGTHQGAVKPAHLDHYLDEFVFRFNRRTSHSRGL
IFYRLLEQAVQTDPITYRQIARKSPREG
KSGMSALGLQRVLGFGSYQTAWTILHRFRRAMVRPGRERLKGIVEVDQSYLAIRERRDTPVGKGGKRRTTKAVVVIAVEILEPKGFGRIRLQQIEEESTA
SVEPFVRAVVEPGSVLRTDGAAIYRALQDDYQHERTVIKSVMPDAIPAHVPLPGVHRVASLLKRWLLGTHQGAVKPAHLDHYLDEFVFRFNRRTSHSRGL
IFYRLLEQAVQTDPITYRQIARKSPREG
Blast result :
Comments
ISBusp7 is 79% aa similar to ISPosp3.
References
1] ISfinder annotation (2017)
2] Moulin, Lionel. (2015) Direct GenBank submission.
2] Moulin, Lionel. (2015) Direct GenBank submission.