ISMbl1

  • Family IS1595
  • Group ISSod11
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
FP102531 ND Magnetovibrio blakemorei
Magnetovibrio blakemorei MV-1
DNA section
IS Length : 1159 bp

Ends


IR Length : 23/24

IRL : ATGGCTTATCGCGATGTCCCATCAGTCATTGAAATCTCACCATTGGCACG
IRR : ACGGCTTATCGCGATGTCCCATCATCGGATGATTTCGGGTTTTTCCCGCG

Insertion site


Left flankDirect repeatRight flankDR Length
TTGAGAATGGGATTTCGATACATGGTCGGAACTCCTTTCC0

DNA sequence

ATGGCTTATCGCGATGTCCCATCAGTCATTGAAATCTCACCATTGGCACGGTATGATTCGTACCGATGGCGAAGCAACTCACCCTTCTTGATTTCCAGGA
ACGGTTCCCTGACGACAGGAGCTGTTACTGTCTGATACGGGATCGGCGATGGCCGGACGGGTTTGTCTGCCCCAAATGCGGCAGCAAAGATGCTTTTCTT
CTGACCAGTCTGGCATACACCTACGCGTGCAAGGAATGCCGTGGCCATACGTCGGTGACTGCAGGCACGATTATGCACCGGACTAAACTGGCGTTGCGGG
TCTGGTTCTGGGCGGCCCATCTTATGGCAACGCATTCGAACGGGATTTCGGCCCGACAGTTGGCGGCGCAGATGGGGATCGCCTACAGTTCGGCATGGTT
GCTGGAACAAAAACTGCGGCGTTCGATGATTGATCCAAGCCGAGATTTGTTGGATGGTGTCGTCGAGATTGATCAGACCGAGATACCGTTCCACGACAAC
GACGCACCCCGGAGCCCACTCAAGACCGGCAAAATCCTGATCATCGAAGCCGTCGAGATTCGTGATAGAACCAGCGGAAAGGCACAGAAACCCAAGCCTC
GTGGGTCGAAGTACCTCGACACCCTGTCGGGGCGCTGCCGTCTGGCGGTCATCCCCAGCAACGAGAAGCCGAACATCCACGCTTTCATTGCTACCAATAT
TGCCCCCGGATCTACCTTAATCTCCGATGGTCACGCTTCAATTCCTGGACTGGAGGGCTACCGGCACGATCCACGTGTCATTGGCAACATGGCGGCGCAC
ATTCCGCTGCAATGGATTCACCGAGTCTTCGCCCTTCTCAAACGTTGGGGCCTCGGCACTTATCATGGTTTTCGCCGCGAGCACATTGATGTCTACCTCA
ACGAATTCGTCTTTCGCTACAACCGTAGATATTATCGTCATGTGTCCTTTGAAACGATCCTTGGTATCGCCGCAAAGCATGCGCCAGCGTCCTATTGGGA
CATCGTCGGCCAGAATAATCCTCGCAAAGGCATCACCATGACGCGCCAGAGACCCCGGCGGCGCAAGACGGCAGAAGGTATGCGCGAGGACGGAACCGGC
CCTTATTCGCGCGGGAAAAACCCGAAATCATCCGATGATGGGACATCGCGATAAGCCGT
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1089 bp362 aa661154+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MAKQLTLLDFQERFPDDRSCYCLIRDRRWPDGFVCPKCGSKDAFLLTSLAYTYACKECRGHTSVTAGTIMHRTKLALRVWFWAAHLMATHSNGISARQLA
AQMGIAYSSAWLLEQKLRRSMIDPSRDLLDGVVEIDQTEIPFHDNDAPRSPLKTGKILIIEAVEIRDRTSGKAQKPKPRGSKYLDTLSGRCRLAVIPSNE
KPNIHAFIATNIAPGSTLISDGHASIPGLEGYRHDPRVIGNMAAHIPLQWIHRVFALLKRWGLGTYHGFRREHIDVYLNEFVFRYNRRYYRHVSFETILG
IAAKHAPASYWDIVGQNNPRKGITMTRQRPRRRKTAEGMREDGTGPYSRGKNPKSSDDGTSR

 

Blast result :
Comments
ISMbl1 is 63% aa similar to ISApr2.
References
1] ISfinder annotation (2017)
2] Jogler,C., Kube,M., Schubbe,S., Ullrich,S., Teeling,H., Bazylinski,D.A., Reinhardt,R. and Schuler,D. (2009) Environ. Microbiol. 11 (5), 1267-1277.