ISfinder Mirror Site

ISBeb3

Family IS1595
Group IS1595

MGE type ISRelated element(s) :
Isoform Synonym(s)

Accession number	Transposition	Origin	Host
MNXU01000050	ND	Betaproteobacteria bacterium	Betaproteobacteria bacterium CG2_30_68_42

DNA section

IS Length : 1048 bp

Ends

IR Length : 24/25

IRL : CCTGATTAGCAACGAACGTCAGCCAGGCTCATCTGGTGAGCCTGGCTGGC
IRR : CCTGATTAGCAATGAACGTCAGCCAACTGAATCGAGCGCCGGGGCCGCGG

Insertion site

Left flank	Direct repeat	Right flank	DR Length
GTTCAGTTCT	TTAGTTTA	TAGTGTTGGG	8

DNA sequence

CCTGATTAGCAACGAACGTCAGCCAGGCTCATCTGGTGAGCCTGGCTGGCCGTAAAGTGACCTCCACCGAACAACGGGAGGGACACGAAATGGCGATGAA
CCGGATTCCATTTCAAGCGGGACTGTCGATGCCGGAATTTTTGAAGGACTTTGGTACCGAGGCACAATGCGAGCAGGCACAGGAAGCCATTCGCTGGCCG
AACGGCTTTGCCTGTCCGCGCTGCGGTGAAGCGGCGCATTATGTTCTGCGGGATGGCGCCCGCAACGTCTTTCAGTCTAACGCCTGTCGGCATCAAGCCT
CGCTGATTGCCGGAACGGTATTTCAGGGCACCAAGCTGCCGCTGACGATCTGGTTCCTGGCGATCTACCGGATCAGCCAAGCCAAGACCGGACTGTCGGC
TTTGGGCTTGAAGCGACAATTGGGCGTCAGTTACCCGACCGCCTGGTTGATGCACCACAAACTCATGCAGGTGATGGCCGAACGCGAAGAGCGCTATGTG
CTTGAAGGAACAGTGCAAGTCGATGACGCCTACCTCGGCGGTGAGCGCACTGGCGGCAAGGTCGGTCGTGGCTCGGAGAACAAGGTGCCGTTTGTCGCCG
CCGTATCGCTGAGCGAGGATGGGCGCCCGTTGCGCATCAAGCTGACGCCCGTATCCGGCTTTACCCTCAAGGCGATTTCGGTCTGGGCGAAAGACCATCT
TGCCCCCACCAGCGCGGTCTTCTCTGACGGACTGGCGTGGTTTGGGGCAGTCACCGAGGCAGGGTGTAGCCATCAGCCAACGGCCATGGCGGGACGCAAA
CCCAAAGACGTGCCCGAGTTCAAGTGGATCAACACCATTCTCGGCAATCTCAAAACCAGCCTTTCCGGTTCCTACCATGCGTTCGACTTTCGCAAGTATG
CCGCCCGTTACCTGGCGGCATTCCGTTATCGATTCAACCGACGATTCGACTTGCGCACCTTGCATCAGCGTTTGCCGATCGCACCTGCTGGCTGTGCGCC
GCGGCCCCGGCGCTCGATTCAGTTGGCTGACGTTCATTGCTAATCAGG

Protein section

ORF number : 1

ORF 1

Length		Begin	End	Strand	Fusion ORF
954 bp	317 aa	90	1043	+	No

ORF function : Transposase
Chemistry : DDE

ORF sequence :

MAMNRIPFQAGLSMPEFLKDFGTEAQCEQAQEAIRWPNGFACPRCGEAAHYVLRDGARNVFQSNACRHQASLIAGTVFQGTKLPLTIWFLAIYRISQAKT
GLSALGLKRQLGVSYPTAWLMHHKLMQVMAEREERYVLEGTVQVDDAYLGGERTGGKVGRGSENKVPFVAAVSLSEDGRPLRIKLTPVSGFTLKAISVWA
KDHLAPTSAVFSDGLAWFGAVTEAGCSHQPTAMAGRKPKDVPEFKWINTILGNLKTSLSGSYHAFDFRKYAARYLAAFRYRFNRRFDLRTLHQRLPIAPA
GCAPRPRRSIQLADVHC

Blast result :

Comments

ISBeb3 is 85% aa similar to ISCap3.

References

1] ISfinder annotation (2017)
2] Probst,A.J., Castelle,C.J., Singh,A., Brown,C.T., Anantharaman,K., Sharon,I., Hug,L.A., Burstein,D., Emerson,J.B., Thomas,B.C. and Banfield,J.F. (2016) Environ. Microbiol.