ISfinder Mirror Site

ISBta1

Family IS1595
Group IS1016

MGE type ISRelated element(s) :
Isoform Synonym(s)

Accession number	Transposition	Origin	Host
AIMG01000010	ND	Bartonella tamiae	Bartonella tamiae Th307

DNA section

IS Length : 708 bp

Ends

IR Length : 17

IRL : GGGGCTGTCCTAGATAACGTAAATTATCTAAGGTTAGCCCATGAGAAAAA
IRR : GGGGCTGTCCTAGATAATTGCTATGAACTATCTCTTACTAATTGTTTTAA

Insertion site

Left flank	Direct repeat	Right flank	DR Length
TATACGAGAACTATAAATTT		AAAAAATTTGAAAAAACAGT	0

DNA sequence

GGGGCTGTCCTAGATAACGTAAATTATCTAAGGTTAGCCCATGAGAAAAAGTCGTTTAAGTTGGTATAAGCAATGCAAGCTTATAGAATTATTTATAGCT
GGTTCAACAGCGAGAACGGCAGCTGCCTTAGTTGGTGTTAACAAAACAACGGCTGCTTATTATTTTCATCGCCTTCGTTGTCTGATTTATCTTCATAGTG
ATCATTTGGAAATGTTTGAAGGTGAAGTTGAAGCTGACGAATCTTATTTTGGAGGAAGGCGCAAGGGGAAGCGTGGACGAGGAGCTTTGGGAAAAGTACC
AGTATTTGGGCTTTTAAAGCGTGATGGCAAGGTTTATACGGTTTTAGTTCCCAATACTCGAGCCGTCACCTTAGTTCCTATTATTAAGGAGCATGTCAAA
CCTGATAGCATAGTTTATACCGATACTTATCGCAGTTATGATGTTCTTGACGTCAGTGAGTTTACTCATTATCGTATTAATCATAGCAAATTATTTGCAG
ATAAGCACAATCATATCAATGGAATTGAGAATTTTTGGAACCAAGCTAAGCGCCATTTACGTAAATTTAATGGTATTCCTCGAGAACATTTTTATCTATT
TTTGAAAGAATGTGAATGGCGTTTTAACAACAGTGACCCAAAAGTTCAATTTTCCCTTTTAAAACAATTAGTAAGAGATAGTTCATAGCAATTATCTAGG
ACAGCCCC

Protein section

ORF number : 1

ORF 1

Length		Begin	End	Strand	Fusion ORF
648 bp	215 aa	41	688	+	No

ORF function : Transposase
Chemistry : DDE

ORF sequence :

MRKSRLSWYKQCKLIELFIAGSTARTAAALVGVNKTTAAYYFHRLRCLIYLHSDHLEMFEGEVEADESYFGGRRKGKRGRGALGKVPVFGLLKRDGKVYT
VLVPNTRAVTLVPIIKEHVKPDSIVYTDTYRSYDVLDVSEFTHYRINHSKLFADKHNHINGIENFWNQAKRHLRKFNGIPREHFYLFLKECEWRFNNSDP
KVQFSLLKQLVRDSS

Blast result :

Comments

ISBta1 is 88% aa similar to ISHpa1.

References

1] ISfinder annotation (2017)
2] Feldgarden,M., Kirby,J., Kosoy,M., Birtles,R., Probert,W.S., Chiaraviglio,L., Young,S.K., Zeng,Q., Gargeya,S., Fitzgerald,M., Haas,B., Abouelleil,A., Alvarado,L., Arachchi,H.M., Berlin,A., Chapman,S.B., Gearin,G., Goldberg,J., Griggs,A., Gujja,S., Hansen,M., Heiman,D., Howarth,C., Larimer,J., Lui,A., MacDonald,P.J.P., McCowen,C., Montmayeur,A., Murphy,C., Neiman,D., Pearson,M., Priest,M., Roberts,A., Saif,S., Shea,T., Sisk,P., Stolte,C., Sykes,S., Wortman,J., Nusbaum,C. and Birren,B. (2012) Direct GenBank submission.