ISNur1
- Family IS1595
- Group IS1016
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP013341 | ND | Nitrosomonas ureae | Nitrosomonas ureae Nm10 |
DNA section
IS Length : 726 bp
Ends
IR Length : 18/22
IRL : GGCTCTAGACTAGCAGAACTAAACTACTAGTCTAGTAAGATGTTAAGAAA
IRR : GGCTCTAGACTAACGGAGTTAATAATATCTGATGAGTTGCCAAAGTTGAT
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
GGGTCGATGCGCAATAATTAA | TTGATAATTATGTGTATTACATA | 0 |
DNA sequence
GGCTCTAGACTAGCAGAACTAAACTACTAGTCTAGTAAGATGTTAAGAAACAGAAAATTAAGTGATTATTGGATTAAAAAAATAATTGAATGCTTTTGCA
TTGATATCCCAGCCAGCAAAGCGGCTCTGCTACTGGGTAAAAATCGTAACACGATTAATCGTTGGTATGGCATTTTCAGGCAAGTAATTTATCATCATCA
GACTGCCCTTAAGAACAAATTGTTAGGCAGAGTGGAAGTTGATGAAAGGAATGATGGCGGGAAACGGCAACGTGGTTATCATGGCAAACTCAAGCGCGGT
CGCGGCACATTAAAACAGCCTGTATTTGGTGTGTTTGAGCGAGATGGCAGGGTGTATACCGAAATAGTGCCAGACTGTAAGCGATTGACTTTACATGAGG
TAATACTAGGTAGAGTATCGATTGAAAGTGTTATTTATAGTGACGGCTGGCGTGGTTATAATGGTTTGGCAGATGTAGGCTATTCCAGGCATTTTCGTGT
ATCGCATGGTGACAATGAATTTGCTCGAGATGGACATTGCCATATTAACGGTATTGAGTCGTTCCGGAGTTTTACCAAGCGACGACTCGCAAAGTTTAAC
GGTGTATCAGTAAACTTTGAACTGCATTTAAAAGAATCTGAATGGCGATGGAAAAAACAATCGAATGAGCTTGCTAATCAACTTTGGCAACTCATCAGAT
ATTATTAACTCCGTTAGTCTAGAGCC
TTGATATCCCAGCCAGCAAAGCGGCTCTGCTACTGGGTAAAAATCGTAACACGATTAATCGTTGGTATGGCATTTTCAGGCAAGTAATTTATCATCATCA
GACTGCCCTTAAGAACAAATTGTTAGGCAGAGTGGAAGTTGATGAAAGGAATGATGGCGGGAAACGGCAACGTGGTTATCATGGCAAACTCAAGCGCGGT
CGCGGCACATTAAAACAGCCTGTATTTGGTGTGTTTGAGCGAGATGGCAGGGTGTATACCGAAATAGTGCCAGACTGTAAGCGATTGACTTTACATGAGG
TAATACTAGGTAGAGTATCGATTGAAAGTGTTATTTATAGTGACGGCTGGCGTGGTTATAATGGTTTGGCAGATGTAGGCTATTCCAGGCATTTTCGTGT
ATCGCATGGTGACAATGAATTTGCTCGAGATGGACATTGCCATATTAACGGTATTGAGTCGTTCCGGAGTTTTACCAAGCGACGACTCGCAAAGTTTAAC
GGTGTATCAGTAAACTTTGAACTGCATTTAAAAGAATCTGAATGGCGATGGAAAAAACAATCGAATGAGCTTGCTAATCAACTTTGGCAACTCATCAGAT
ATTATTAACTCCGTTAGTCTAGAGCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
669 bp | 222 aa | 40 | 708 | + | No |
Chemistry : DDE
ORF sequence :
MLRNRKLSDYWIKKIIECFCIDIPASKAALLLGKNRNTINRWYGIFRQVIYHHQTALKNKLLGRVEVDERNDGGKRQRGYHGKLKRGRGTLKQPVFGVFE
RDGRVYTEIVPDCKRLTLHEVILGRVSIESVIYSDGWRGYNGLADVGYSRHFRVSHGDNEFARDGHCHINGIESFRSFTKRRLAKFNGVSVNFELHLKES
EWRWKKQSNELANQLWQLIRYY
RDGRVYTEIVPDCKRLTLHEVILGRVSIESVIYSDGWRGYNGLADVGYSRHFRVSHGDNEFARDGHCHINGIESFRSFTKRRLAKFNGVSVNFELHLKES
EWRWKKQSNELANQLWQLIRYY
Blast result :
Comments
ISNur1 is 84% aa similar to ISAcra1.
References
1] ISfinder annotation (2017)
2] Kozlowski,J.A., Kits,K.D. and Stein,L.Y. (2016) Genome Announc 4 (2).
2] Kozlowski,J.A., Kits,K.D. and Stein,L.Y. (2016) Genome Announc 4 (2).