ISNur1

  • Family IS1595
  • Group IS1016
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
CP013341 ND Nitrosomonas ureae
Nitrosomonas ureae Nm10
DNA section
IS Length : 726 bp

Ends


IR Length : 18/22

IRL : GGCTCTAGACTAGCAGAACTAAACTACTAGTCTAGTAAGATGTTAAGAAA
IRR : GGCTCTAGACTAACGGAGTTAATAATATCTGATGAGTTGCCAAAGTTGAT

Insertion site


Left flankDirect repeatRight flankDR Length
GGGTCGATGCGCAATAATTAATTGATAATTATGTGTATTACATA0

DNA sequence

GGCTCTAGACTAGCAGAACTAAACTACTAGTCTAGTAAGATGTTAAGAAACAGAAAATTAAGTGATTATTGGATTAAAAAAATAATTGAATGCTTTTGCA
TTGATATCCCAGCCAGCAAAGCGGCTCTGCTACTGGGTAAAAATCGTAACACGATTAATCGTTGGTATGGCATTTTCAGGCAAGTAATTTATCATCATCA
GACTGCCCTTAAGAACAAATTGTTAGGCAGAGTGGAAGTTGATGAAAGGAATGATGGCGGGAAACGGCAACGTGGTTATCATGGCAAACTCAAGCGCGGT
CGCGGCACATTAAAACAGCCTGTATTTGGTGTGTTTGAGCGAGATGGCAGGGTGTATACCGAAATAGTGCCAGACTGTAAGCGATTGACTTTACATGAGG
TAATACTAGGTAGAGTATCGATTGAAAGTGTTATTTATAGTGACGGCTGGCGTGGTTATAATGGTTTGGCAGATGTAGGCTATTCCAGGCATTTTCGTGT
ATCGCATGGTGACAATGAATTTGCTCGAGATGGACATTGCCATATTAACGGTATTGAGTCGTTCCGGAGTTTTACCAAGCGACGACTCGCAAAGTTTAAC
GGTGTATCAGTAAACTTTGAACTGCATTTAAAAGAATCTGAATGGCGATGGAAAAAACAATCGAATGAGCTTGCTAATCAACTTTGGCAACTCATCAGAT
ATTATTAACTCCGTTAGTCTAGAGCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
669 bp222 aa40708+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MLRNRKLSDYWIKKIIECFCIDIPASKAALLLGKNRNTINRWYGIFRQVIYHHQTALKNKLLGRVEVDERNDGGKRQRGYHGKLKRGRGTLKQPVFGVFE
RDGRVYTEIVPDCKRLTLHEVILGRVSIESVIYSDGWRGYNGLADVGYSRHFRVSHGDNEFARDGHCHINGIESFRSFTKRRLAKFNGVSVNFELHLKES
EWRWKKQSNELANQLWQLIRYY

 

Blast result :
Comments
ISNur1 is 84% aa similar to ISAcra1.
References
1] ISfinder annotation (2017)
2] Kozlowski,J.A., Kits,K.D. and Stein,L.Y. (2016) Genome Announc 4 (2).