ISPaen7

  • Family IS1595
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
FNSW01000001 ND Paenibacillus sp.
Paenibacillus sp. GP183
DNA section
IS Length : 1017 bp

Ends


IR Length : 22/28

IRL : TTGAATATCAAGTTGTTTCAGCAAGGTCTTTAAATACGAACATTTGTTTG
IRR : TTGAATATCAAGTTAGCTCCGCATCGTCATATGGTAAGTTCCTGGTAAGT

Insertion site


Left flankDirect repeatRight flankDR Length
ACTGGATGTAATTAAAAAATATATTGAAAGC10

DNA sequence

TTGAATATCAAGTTGTTTCAGCAAGGTCTTTAAATACGAACATTTGTTTGATATAATAAATACAAACGAATGTTCGGGAGTGATTGGCGTGGCTCAACAA
GAAACGATGACGCTTAAGAGGTTTCAAGAGAAGTTTAATACGGAACAAGCATGTCACGATCATCTGTTCCAGATTCGTTGGCCCGAAGGGTTTTGCTGTC
CGAAATGCCAAAGCCAATCGTTCTATTTCCTAGAGACGCGGAAGCTTTACCAGTGTATGGCTTGTAAGCATCAAACTTCCGTGACGGCCGGTACCATTAT
GCATAAAACGCACACGCCTTTGTTGACCTGGTTTTGGGCGATCTTTTTAATGGCCCATGATAAACGCGGCATCTCTGCAACCTATATCGCTCGAGAACTT
GAATTGACCTATCCGACAGCCTGGTTGCTCCTTCAGAAAGTCAGGAAAGCTATGGGTGATCGCGATGCCAACTATCGACTGGCCGGCTTGGTTGAACTCG
ATGATGCCTTTTTTGGTGCACCAACAGAAGGCGGCAAACGCGGTCGTGGCACCGAACAAACGCCCGTGCTCGTAGGTGTTTCACTCAACAAACAGGGAGC
ACCGCAATACGTCAAGATGCAAGTGATTCCGGATGTAAAAGGGAAAACGCTGATCGATTTTGCACAGCGTCATATCGATCCCGGCGCAACGATCAGTAGC
GACGCTTACCATTCTTACAACGCGCTTGCGAAAGAATACAACCACCAGCCGCTCAAATTCAACGTCAAAGAAAACCCGGATCATTTGAAGTGGCTTCATA
CGATGATCTCAAACGCCAAAGCTTCTATTGGCGGTACGTTTCACGGCTTGGCACCCAAGCATCTGCAAGCCTACTTGAATGAATTTTGCTTCCGTACCAA
CCGCAGACAGTTTGAAGGACAACTGTTCAATCGGCTTTTATCTGCTTGTATTTCTACCGATACCATTACTTACCAGGAACTTACCATATGACGATGCGGA
GCTAACTTGATATTCAA
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
903 bp300 aa89991+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MAQQETMTLKRFQEKFNTEQACHDHLFQIRWPEGFCCPKCQSQSFYFLETRKLYQCMACKHQTSVTAGTIMHKTHTPLLTWFWAIFLMAHDKRGISATYI
ARELELTYPTAWLLLQKVRKAMGDRDANYRLAGLVELDDAFFGAPTEGGKRGRGTEQTPVLVGVSLNKQGAPQYVKMQVIPDVKGKTLIDFAQRHIDPGA
TISSDAYHSYNALAKEYNHQPLKFNVKENPDHLKWLHTMISNAKASIGGTFHGLAPKHLQAYLNEFCFRTNRRQFEGQLFNRLLSACISTDTITYQELTI

 

Blast result :
Comments
ISPaen7 is 70% aa similar to ISPlba3.
References
1] ISfinder annotation (2017).
2] Varghese,N. and Submissions,S. (2016) Direct GenBank submission.