ISPaen7
- Family IS1595
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
FNSW01000001 | ND | Paenibacillus sp. | Paenibacillus sp. GP183 |
DNA section
IS Length : 1017 bp
Ends
IR Length : 22/28
IRL : TTGAATATCAAGTTGTTTCAGCAAGGTCTTTAAATACGAACATTTGTTTG
IRR : TTGAATATCAAGTTAGCTCCGCATCGTCATATGGTAAGTTCCTGGTAAGT
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
ACTGGATGTA | ATTAAAAAAT | ATATTGAAAGC | 10 |
DNA sequence
TTGAATATCAAGTTGTTTCAGCAAGGTCTTTAAATACGAACATTTGTTTGATATAATAAATACAAACGAATGTTCGGGAGTGATTGGCGTGGCTCAACAA
GAAACGATGACGCTTAAGAGGTTTCAAGAGAAGTTTAATACGGAACAAGCATGTCACGATCATCTGTTCCAGATTCGTTGGCCCGAAGGGTTTTGCTGTC
CGAAATGCCAAAGCCAATCGTTCTATTTCCTAGAGACGCGGAAGCTTTACCAGTGTATGGCTTGTAAGCATCAAACTTCCGTGACGGCCGGTACCATTAT
GCATAAAACGCACACGCCTTTGTTGACCTGGTTTTGGGCGATCTTTTTAATGGCCCATGATAAACGCGGCATCTCTGCAACCTATATCGCTCGAGAACTT
GAATTGACCTATCCGACAGCCTGGTTGCTCCTTCAGAAAGTCAGGAAAGCTATGGGTGATCGCGATGCCAACTATCGACTGGCCGGCTTGGTTGAACTCG
ATGATGCCTTTTTTGGTGCACCAACAGAAGGCGGCAAACGCGGTCGTGGCACCGAACAAACGCCCGTGCTCGTAGGTGTTTCACTCAACAAACAGGGAGC
ACCGCAATACGTCAAGATGCAAGTGATTCCGGATGTAAAAGGGAAAACGCTGATCGATTTTGCACAGCGTCATATCGATCCCGGCGCAACGATCAGTAGC
GACGCTTACCATTCTTACAACGCGCTTGCGAAAGAATACAACCACCAGCCGCTCAAATTCAACGTCAAAGAAAACCCGGATCATTTGAAGTGGCTTCATA
CGATGATCTCAAACGCCAAAGCTTCTATTGGCGGTACGTTTCACGGCTTGGCACCCAAGCATCTGCAAGCCTACTTGAATGAATTTTGCTTCCGTACCAA
CCGCAGACAGTTTGAAGGACAACTGTTCAATCGGCTTTTATCTGCTTGTATTTCTACCGATACCATTACTTACCAGGAACTTACCATATGACGATGCGGA
GCTAACTTGATATTCAA
GAAACGATGACGCTTAAGAGGTTTCAAGAGAAGTTTAATACGGAACAAGCATGTCACGATCATCTGTTCCAGATTCGTTGGCCCGAAGGGTTTTGCTGTC
CGAAATGCCAAAGCCAATCGTTCTATTTCCTAGAGACGCGGAAGCTTTACCAGTGTATGGCTTGTAAGCATCAAACTTCCGTGACGGCCGGTACCATTAT
GCATAAAACGCACACGCCTTTGTTGACCTGGTTTTGGGCGATCTTTTTAATGGCCCATGATAAACGCGGCATCTCTGCAACCTATATCGCTCGAGAACTT
GAATTGACCTATCCGACAGCCTGGTTGCTCCTTCAGAAAGTCAGGAAAGCTATGGGTGATCGCGATGCCAACTATCGACTGGCCGGCTTGGTTGAACTCG
ATGATGCCTTTTTTGGTGCACCAACAGAAGGCGGCAAACGCGGTCGTGGCACCGAACAAACGCCCGTGCTCGTAGGTGTTTCACTCAACAAACAGGGAGC
ACCGCAATACGTCAAGATGCAAGTGATTCCGGATGTAAAAGGGAAAACGCTGATCGATTTTGCACAGCGTCATATCGATCCCGGCGCAACGATCAGTAGC
GACGCTTACCATTCTTACAACGCGCTTGCGAAAGAATACAACCACCAGCCGCTCAAATTCAACGTCAAAGAAAACCCGGATCATTTGAAGTGGCTTCATA
CGATGATCTCAAACGCCAAAGCTTCTATTGGCGGTACGTTTCACGGCTTGGCACCCAAGCATCTGCAAGCCTACTTGAATGAATTTTGCTTCCGTACCAA
CCGCAGACAGTTTGAAGGACAACTGTTCAATCGGCTTTTATCTGCTTGTATTTCTACCGATACCATTACTTACCAGGAACTTACCATATGACGATGCGGA
GCTAACTTGATATTCAA
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
903 bp | 300 aa | 89 | 991 | + | No |
Chemistry : DDE
ORF sequence :
MAQQETMTLKRFQEKFNTEQACHDHLFQIRWPEGFCCPKCQSQSFYFLETRKLYQCMACKHQTSVTAGTIMHKTHTPLLTWFWAIFLMAHDKRGISATYI
ARELELTYPTAWLLLQKVRKAMGDRDANYRLAGLVELDDAFFGAPTEGGKRGRGTEQTPVLVGVSLNKQGAPQYVKMQVIPDVKGKTLIDFAQRHIDPGA
TISSDAYHSYNALAKEYNHQPLKFNVKENPDHLKWLHTMISNAKASIGGTFHGLAPKHLQAYLNEFCFRTNRRQFEGQLFNRLLSACISTDTITYQELTI
ARELELTYPTAWLLLQKVRKAMGDRDANYRLAGLVELDDAFFGAPTEGGKRGRGTEQTPVLVGVSLNKQGAPQYVKMQVIPDVKGKTLIDFAQRHIDPGA
TISSDAYHSYNALAKEYNHQPLKFNVKENPDHLKWLHTMISNAKASIGGTFHGLAPKHLQAYLNEFCFRTNRRQFEGQLFNRLLSACISTDTITYQELTI
Blast result :
Comments
ISPaen7 is 70% aa similar to ISPlba3.
References
1] ISfinder annotation (2017).
2] Varghese,N. and Submissions,S. (2016) Direct GenBank submission.
2] Varghese,N. and Submissions,S. (2016) Direct GenBank submission.