ISBaba4
- Family IS1595
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP012155 | ND | Bacteroidetes bacterium | Bacteroidetes bacterium UKL13-3 |
DNA section
IS Length : 987 bp
Ends
IR Length : 19/24
IRL : AATGTATATCCGCAAATATACCTAACTTTAGATAGGCTGCGGATTGGGGA
IRR : TATGTATATGCGCAAGTTTACCCATAAATTTTAGCTACAGCAAGAGTTAG
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
TCCAATCAATAATCCTTTAATCATTT | AATTTTTTCGATTCAAAATGACATGCT | 0 |
DNA sequence
AATGTATATCCGCAAATATACCTAACTTTAGATAGGCTGCGGATTGGGGATTTAGATTTGTAGTATCAAAATACTACAATTTAAACAAGAGTTTGCAGAT
GAGACAATCTGCCGCGAGCATTTCCGAAACCAACGAGAGACGGAAGGGGTTAAATGTAAAAAGTGTGGAAGCACCAATCATTATTGGCTTCGCTACAAGT
ACCAATGGCAATGTAAAACTTGTTCGTTTAGAACAACATTACGCAGTGGAACTGTGATGGAGCATTCGAAAATGTCCTTTCAAAAATGGTACGGAACCAT
TGCTTTTATGAGTTCTACCAAAAAAGGTACGTCAGCCAAGGAGCTACAAAAACAAATTGACCATAAACGCTATGCAAGTGTTTGGCTGTTGATGCATAAA
GTTCGCAAGGCTATGGGAAATAGAGATGATACATACAACTTAACTGGCATGTTAGAAATGGACGAGGGCCATTTTGAAGTAGCAACCAAACAGGGCATTA
AATTAAAAGGAGGCAAAGGGAGTCAAAAGCAACAAAACATGGCAGTGTTAGCAGAATCAATACCTTTGGAGGATTTAGACACAAGTAAAAAATCAAGTCA
TTGCAAATACTTTAAAATGAAAGTTTTAGATAATCATAAATCCGAAAGCATTAACTCGCTATTTAAAAATAATATCAAAGAGTGCAGTATTGTGTTTACT
GATAAAAGCACCAGTTACATCGATATTGCTAATTATGTAGAGGTACACGTAACAGAAAGGTCGAATAATAAAACAACAACATCTACACTTAAATGGGTAC
ACATTGCAATTAGTAATGCTAAACGAACCCTGTTAGGAATTTACCACAAAACAAGCAGGACTTACTTGCAACGCTATTTGAACGAATTTTGTTACAAATT
AAATCGCAGATATTTTGGCGATAAACTATTTGATATACTAACTCTTGCTGTAGCTAAAATTTATGGGTAAACTTGCGCATATACATA
GAGACAATCTGCCGCGAGCATTTCCGAAACCAACGAGAGACGGAAGGGGTTAAATGTAAAAAGTGTGGAAGCACCAATCATTATTGGCTTCGCTACAAGT
ACCAATGGCAATGTAAAACTTGTTCGTTTAGAACAACATTACGCAGTGGAACTGTGATGGAGCATTCGAAAATGTCCTTTCAAAAATGGTACGGAACCAT
TGCTTTTATGAGTTCTACCAAAAAAGGTACGTCAGCCAAGGAGCTACAAAAACAAATTGACCATAAACGCTATGCAAGTGTTTGGCTGTTGATGCATAAA
GTTCGCAAGGCTATGGGAAATAGAGATGATACATACAACTTAACTGGCATGTTAGAAATGGACGAGGGCCATTTTGAAGTAGCAACCAAACAGGGCATTA
AATTAAAAGGAGGCAAAGGGAGTCAAAAGCAACAAAACATGGCAGTGTTAGCAGAATCAATACCTTTGGAGGATTTAGACACAAGTAAAAAATCAAGTCA
TTGCAAATACTTTAAAATGAAAGTTTTAGATAATCATAAATCCGAAAGCATTAACTCGCTATTTAAAAATAATATCAAAGAGTGCAGTATTGTGTTTACT
GATAAAAGCACCAGTTACATCGATATTGCTAATTATGTAGAGGTACACGTAACAGAAAGGTCGAATAATAAAACAACAACATCTACACTTAAATGGGTAC
ACATTGCAATTAGTAATGCTAAACGAACCCTGTTAGGAATTTACCACAAAACAAGCAGGACTTACTTGCAACGCTATTTGAACGAATTTTGTTACAAATT
AAATCGCAGATATTTTGGCGATAAACTATTTGATATACTAACTCTTGCTGTAGCTAAAATTTATGGGTAAACTTGCGCATATACATA
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
906 bp | 301 aa | 65 | 970 | + | No |
Chemistry : DDE
ORF sequence :
MKILQFKQEFADETICREHFRNQRETEGVKCKKCGSTNHYWLRYKYQWQCKTCSFRTTLRSGTVMEHSKMSFQKWYGTIAFMSSTKKGTSAKELQKQIDH
KRYASVWLLMHKVRKAMGNRDDTYNLTGMLEMDEGHFEVATKQGIKLKGGKGSQKQQNMAVLAESIPLEDLDTSKKSSHCKYFKMKVLDNHKSESINSLF
KNNIKECSIVFTDKSTSYIDIANYVEVHVTERSNNKTTTSTLKWVHIAISNAKRTLLGIYHKTSRTYLQRYLNEFCYKLNRRYFGDKLFDILTLAVAKIY
G
KRYASVWLLMHKVRKAMGNRDDTYNLTGMLEMDEGHFEVATKQGIKLKGGKGSQKQQNMAVLAESIPLEDLDTSKKSSHCKYFKMKVLDNHKSESINSLF
KNNIKECSIVFTDKSTSYIDIANYVEVHVTERSNNKTTTSTLKWVHIAISNAKRTLLGIYHKTSRTYLQRYLNEFCYKLNRRYFGDKLFDILTLAVAKIY
G
Blast result :
Comments
ISBaba4 is 77% aa similar to ISBbi1.
References
1] ISfinder annotation (2017)
2] Driscoll,C.B. (2015) Direct GenBank submission.
2] Driscoll,C.B. (2015) Direct GenBank submission.