ISBaba4

  • Family IS1595
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
CP012155 ND Bacteroidetes bacterium
Bacteroidetes bacterium UKL13-3
DNA section
IS Length : 987 bp

Ends


IR Length : 19/24

IRL : AATGTATATCCGCAAATATACCTAACTTTAGATAGGCTGCGGATTGGGGA
IRR : TATGTATATGCGCAAGTTTACCCATAAATTTTAGCTACAGCAAGAGTTAG

Insertion site


Left flankDirect repeatRight flankDR Length
TCCAATCAATAATCCTTTAATCATTTAATTTTTTCGATTCAAAATGACATGCT0

DNA sequence

AATGTATATCCGCAAATATACCTAACTTTAGATAGGCTGCGGATTGGGGATTTAGATTTGTAGTATCAAAATACTACAATTTAAACAAGAGTTTGCAGAT
GAGACAATCTGCCGCGAGCATTTCCGAAACCAACGAGAGACGGAAGGGGTTAAATGTAAAAAGTGTGGAAGCACCAATCATTATTGGCTTCGCTACAAGT
ACCAATGGCAATGTAAAACTTGTTCGTTTAGAACAACATTACGCAGTGGAACTGTGATGGAGCATTCGAAAATGTCCTTTCAAAAATGGTACGGAACCAT
TGCTTTTATGAGTTCTACCAAAAAAGGTACGTCAGCCAAGGAGCTACAAAAACAAATTGACCATAAACGCTATGCAAGTGTTTGGCTGTTGATGCATAAA
GTTCGCAAGGCTATGGGAAATAGAGATGATACATACAACTTAACTGGCATGTTAGAAATGGACGAGGGCCATTTTGAAGTAGCAACCAAACAGGGCATTA
AATTAAAAGGAGGCAAAGGGAGTCAAAAGCAACAAAACATGGCAGTGTTAGCAGAATCAATACCTTTGGAGGATTTAGACACAAGTAAAAAATCAAGTCA
TTGCAAATACTTTAAAATGAAAGTTTTAGATAATCATAAATCCGAAAGCATTAACTCGCTATTTAAAAATAATATCAAAGAGTGCAGTATTGTGTTTACT
GATAAAAGCACCAGTTACATCGATATTGCTAATTATGTAGAGGTACACGTAACAGAAAGGTCGAATAATAAAACAACAACATCTACACTTAAATGGGTAC
ACATTGCAATTAGTAATGCTAAACGAACCCTGTTAGGAATTTACCACAAAACAAGCAGGACTTACTTGCAACGCTATTTGAACGAATTTTGTTACAAATT
AAATCGCAGATATTTTGGCGATAAACTATTTGATATACTAACTCTTGCTGTAGCTAAAATTTATGGGTAAACTTGCGCATATACATA
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
906 bp301 aa65970+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MKILQFKQEFADETICREHFRNQRETEGVKCKKCGSTNHYWLRYKYQWQCKTCSFRTTLRSGTVMEHSKMSFQKWYGTIAFMSSTKKGTSAKELQKQIDH
KRYASVWLLMHKVRKAMGNRDDTYNLTGMLEMDEGHFEVATKQGIKLKGGKGSQKQQNMAVLAESIPLEDLDTSKKSSHCKYFKMKVLDNHKSESINSLF
KNNIKECSIVFTDKSTSYIDIANYVEVHVTERSNNKTTTSTLKWVHIAISNAKRTLLGIYHKTSRTYLQRYLNEFCYKLNRRYFGDKLFDILTLAVAKIY
G

 

Blast result :
Comments
ISBaba4 is 77% aa similar to ISBbi1.
References
1] ISfinder annotation (2017)
2] Driscoll,C.B. (2015) Direct GenBank submission.