ISGal2

  • Family IS1595
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
LZRN01000109 ND Gelidibacter algens
Gelidibacter algens ACAM 536
DNA section
IS Length : 1002 bp

Ends


IR Length : 15/21

IRL : TTGTATATCCGTAAACACCCCTAATATAGGCTAATTATTGTATATTTACT
IRR : TTGTATATCCGTTTAATGTCCACCTGCTGAGATGCTAGCTATTACTAGCC

Insertion site


Left flankDirect repeatRight flankDR Length
ATAAAAAATGTATT AATCAATTA AAATCAATTA TTATTTAAACTGCAA9

DNA sequence

TTGTATATCCGTAAACACCCCTAATATAGGCTAATTATTGTATATTTACTCAGATTTAAATCGGTTATAGACATGAACATATTTTCCTTTGGGGCAGAAT
TCACGGATGAAGAGAGCTGCCGCCTCCATTTCAAAAAACAGCGTGACGAGCATGGAGTGGTCTGCCACCGCTGCCAATCGACCGACCATTATTGGCTTGT
CAACAAGTGGAGCTATCAGTGCAAGTCCTGCAAGGCGAGAATCTCCCTGCGTAGCGGAACCATCATGGAAAGCTCGAAGCTATCCTTCATGACGTGGTAC
AAGACCATCTTCTTGCTGAGCACGACCAAAAAGGGCTTCTCCAGCAAAGAGATCCAGCGCCAGCTCGGGCTCAAGCGCTATGAGCCTGTCTGGGCAATGG
TGCACAAGCTGCGCAAGGCCATGGGCACGCGGGACGACCGCTACACCCTTGAGGGGATGATAGAGATGGACGAGGGATATTTTACCATCGAGGCCTCCGG
TCACGAACATGAGACACAGAAAGCGGGCCGCGGCAGCAAGACAAAGAGCAATGTGATGTTCATGGCAGAGAGCACGGTGCTGGAAGATCTGGAAACAGGG
AAAGTTGAGCGACAGGCCAGATATTTCAAGGCAAAGGTGCTCACGGACCATAAAATGGGAAACACCGACAGAACACTGCAGGACGCCATAGACAACGATG
AATCCATCGTCTTCACTGACCAGAGCACGTCATATGTGAACATTGCGGATTACGTCGATATCCATATAAGTGAAAAGTCGAGCGAGCAGACCACCAAGGA
AACCTTGAAATGGGTTCATATCGCGATAAGCAACGCCAAGCGAAATTTCCTTGGGACATACCATAAGATAAAGGCCAAATACCTGCAACTTTACCTGAAT
GAGTTCATTTACAAGCTAAACAGGAGATACTTTGGCGAGAGGATATTTGACAGGCTAGTAATAGCTAGCATCTCAGCAGGTGGACATTAAACGGATATAC
AA
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
918 bp304 aa73990+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MNIFSFGAEFTDEESCRLHFKKQRDEHGVVCHRCQSTDHYWLVNKWSYQCKSCKARISLRSGTIMESSKLSFMTWYKTIFLLSTTKKGFSSKEIQRQLGL
KRYEPVWAMVHKLRKAMGTRDDRYTLEGMIEMDEGYFTIEASGHEHETQKAGRGSKTKSNVMFMAESTVLEDLETGKVERQARYFKAKVLTDHKMGNTDR
TLQDAIDNDESIVFTDQSTSYVNIADYVDIHISEKSSEQTTKETLKWVHIAISNAKRNFLGTYHKIKAKYLQLYLNEFIYKLNRRYFGERIFDRLVIASI
SAGG

 

Blast result :
Comments
ISGal2 is 84% aa similar to ISAlg2.
References
1] ISfinder annotation (2017)
2] Bowman,J.P. (2016) Direct GenBank submission.