ISGal2
- Family IS1595
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
LZRN01000109 | ND | Gelidibacter algens | Gelidibacter algens ACAM 536 |
DNA section
IS Length : 1002 bp
Ends
IR Length : 15/21
IRL : TTGTATATCCGTAAACACCCCTAATATAGGCTAATTATTGTATATTTACT
IRR : TTGTATATCCGTTTAATGTCCACCTGCTGAGATGCTAGCTATTACTAGCC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
ATAAAAAATGTATT AATCAATTA A | AATCAATTA TTATTTAAACTGCAA | 9 |
DNA sequence
TTGTATATCCGTAAACACCCCTAATATAGGCTAATTATTGTATATTTACTCAGATTTAAATCGGTTATAGACATGAACATATTTTCCTTTGGGGCAGAAT
TCACGGATGAAGAGAGCTGCCGCCTCCATTTCAAAAAACAGCGTGACGAGCATGGAGTGGTCTGCCACCGCTGCCAATCGACCGACCATTATTGGCTTGT
CAACAAGTGGAGCTATCAGTGCAAGTCCTGCAAGGCGAGAATCTCCCTGCGTAGCGGAACCATCATGGAAAGCTCGAAGCTATCCTTCATGACGTGGTAC
AAGACCATCTTCTTGCTGAGCACGACCAAAAAGGGCTTCTCCAGCAAAGAGATCCAGCGCCAGCTCGGGCTCAAGCGCTATGAGCCTGTCTGGGCAATGG
TGCACAAGCTGCGCAAGGCCATGGGCACGCGGGACGACCGCTACACCCTTGAGGGGATGATAGAGATGGACGAGGGATATTTTACCATCGAGGCCTCCGG
TCACGAACATGAGACACAGAAAGCGGGCCGCGGCAGCAAGACAAAGAGCAATGTGATGTTCATGGCAGAGAGCACGGTGCTGGAAGATCTGGAAACAGGG
AAAGTTGAGCGACAGGCCAGATATTTCAAGGCAAAGGTGCTCACGGACCATAAAATGGGAAACACCGACAGAACACTGCAGGACGCCATAGACAACGATG
AATCCATCGTCTTCACTGACCAGAGCACGTCATATGTGAACATTGCGGATTACGTCGATATCCATATAAGTGAAAAGTCGAGCGAGCAGACCACCAAGGA
AACCTTGAAATGGGTTCATATCGCGATAAGCAACGCCAAGCGAAATTTCCTTGGGACATACCATAAGATAAAGGCCAAATACCTGCAACTTTACCTGAAT
GAGTTCATTTACAAGCTAAACAGGAGATACTTTGGCGAGAGGATATTTGACAGGCTAGTAATAGCTAGCATCTCAGCAGGTGGACATTAAACGGATATAC
AA
TCACGGATGAAGAGAGCTGCCGCCTCCATTTCAAAAAACAGCGTGACGAGCATGGAGTGGTCTGCCACCGCTGCCAATCGACCGACCATTATTGGCTTGT
CAACAAGTGGAGCTATCAGTGCAAGTCCTGCAAGGCGAGAATCTCCCTGCGTAGCGGAACCATCATGGAAAGCTCGAAGCTATCCTTCATGACGTGGTAC
AAGACCATCTTCTTGCTGAGCACGACCAAAAAGGGCTTCTCCAGCAAAGAGATCCAGCGCCAGCTCGGGCTCAAGCGCTATGAGCCTGTCTGGGCAATGG
TGCACAAGCTGCGCAAGGCCATGGGCACGCGGGACGACCGCTACACCCTTGAGGGGATGATAGAGATGGACGAGGGATATTTTACCATCGAGGCCTCCGG
TCACGAACATGAGACACAGAAAGCGGGCCGCGGCAGCAAGACAAAGAGCAATGTGATGTTCATGGCAGAGAGCACGGTGCTGGAAGATCTGGAAACAGGG
AAAGTTGAGCGACAGGCCAGATATTTCAAGGCAAAGGTGCTCACGGACCATAAAATGGGAAACACCGACAGAACACTGCAGGACGCCATAGACAACGATG
AATCCATCGTCTTCACTGACCAGAGCACGTCATATGTGAACATTGCGGATTACGTCGATATCCATATAAGTGAAAAGTCGAGCGAGCAGACCACCAAGGA
AACCTTGAAATGGGTTCATATCGCGATAAGCAACGCCAAGCGAAATTTCCTTGGGACATACCATAAGATAAAGGCCAAATACCTGCAACTTTACCTGAAT
GAGTTCATTTACAAGCTAAACAGGAGATACTTTGGCGAGAGGATATTTGACAGGCTAGTAATAGCTAGCATCTCAGCAGGTGGACATTAAACGGATATAC
AA
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
918 bp | 304 aa | 73 | 990 | + | No |
Chemistry : DDE
ORF sequence :
MNIFSFGAEFTDEESCRLHFKKQRDEHGVVCHRCQSTDHYWLVNKWSYQCKSCKARISLRSGTIMESSKLSFMTWYKTIFLLSTTKKGFSSKEIQRQLGL
KRYEPVWAMVHKLRKAMGTRDDRYTLEGMIEMDEGYFTIEASGHEHETQKAGRGSKTKSNVMFMAESTVLEDLETGKVERQARYFKAKVLTDHKMGNTDR
TLQDAIDNDESIVFTDQSTSYVNIADYVDIHISEKSSEQTTKETLKWVHIAISNAKRNFLGTYHKIKAKYLQLYLNEFIYKLNRRYFGERIFDRLVIASI
SAGG
KRYEPVWAMVHKLRKAMGTRDDRYTLEGMIEMDEGYFTIEASGHEHETQKAGRGSKTKSNVMFMAESTVLEDLETGKVERQARYFKAKVLTDHKMGNTDR
TLQDAIDNDESIVFTDQSTSYVNIADYVDIHISEKSSEQTTKETLKWVHIAISNAKRNFLGTYHKIKAKYLQLYLNEFIYKLNRRYFGERIFDRLVIASI
SAGG
Blast result :
Comments
ISGal2 is 84% aa similar to ISAlg2.
References
1] ISfinder annotation (2017)
2] Bowman,J.P. (2016) Direct GenBank submission.
2] Bowman,J.P. (2016) Direct GenBank submission.