ISBath1
- Family IS1595
- Group ISPna2
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
JWIQ02000033 | ND | Bacillus thermotolerans | Bacillus thermotolerans SGZ-8 Bacillaceae bacterium MTCC 10057 |
DNA section
IS Length : 1580 bp
Ends
IR Length : 22/27
IRL : GGCTGTTTTCGTATAGATTGTTGCTTTCTTGACCAAACTTGTAGAAGGCT
IRR : GGCTGTTTTCGCAAACTTTGTTGTTTTTTATAGAAATAATATAAATTGAA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CGAATGTCCCTTA | TTATTTAA | AAATGAACAAA | 8 |
DNA sequence
GGCTGTTTTCGTATAGATTGTTGCTTTCTTGACCAAACTTGTAGAAGGCTTGTATAATAGGGTTTAGGAGGCGTTCAGTATGTGGAAAGATGTATATGAA
GATTTCAGCGATTTAACTAAATCAGAGCAGTTAGCGTTGTTTACCGCTATGAAACAGGATTTATTTCCAGAAGAACCAGACAAAATCACTAAATTGCTCA
AAACCATTCGTGAGGCTCGGTTTGCTTCGGGTATGGCTTGTGTTCATTGTGGCAGTATGTCTGTGAAACGTAATGGTAAATATAGGTCAAGACAACGCTA
TCTATGTAAGGATTGTGGAAAGTCTTTCAATGATATGACTAATACTCCGTTTTCAGGCTCACGATACCCTGAAAAATGGGTAACATACATTGAACTAATG
GTAGAAGGCTACACTCTACCCAAAATCGCTAAACGTCTACAAATACACATATCCACTGCATTTTATTGGAGACATAAAATCTTGAACGCATTAGGCAGTC
TTGGATTTAATCAACTACAAGGGATAGTTGAAAGTGACGAAACCTTCTTTCGTGAGTCTTTAAAAGGTCGTGAAGTCTCACATAGGAAAGCAAAGAAGCG
TGGAGAAAAGGACAAAAAGAGAGGAATTTCTAACTCTAAAATTGCTGTGGTAGTGGCACAAGACCGCAACGGAAACCTTATTGCTCGAAAAGCAGGAACG
GGACGTGTTAAGGCTGAAGAAATTGATGATGTGATAGGTAAGCATATTCACCCGTCTGCTTTGTTATGTACAGATACTGCAACCAATTATAAGAGGTTTG
CTAAACTCAAAGGTTTACTACACGAAACTGTCAATGAACGCCAAAAACAACGTGTCAAGAAAGGTATCTATCATATCCAACACGTAAATAACTCTCACAG
CCGTCTGAAGGGATGGATGGAGCGTTTTCAAGGTGTAGCGACTAAATACTTGGATAACTACCTTTATTGGTTTCGTTGGCTTGATTTAAGCAAGGATTTA
GCATTCGATAAACAGGTAGAGCGAATGCTTGTTTCAGCGTGTCAAAAGTCAAATTATAAAACTGTCCAGATGTTAAGGGGTGCATAAAAAAGACCTCTTC
GCTGAGGTCTTTTTCAGAAATTAGTTCTTTTCAATTTCTGCTTAGTTTGCACTATGCAGTTCTCTAACTAAGACTTGGTTCAACTTCTTTTTGCACTTAA
CTAAATAGGATTCTCTACCAAGTTTGTTGGTATTAAAACTACCAATAGTTTTACGGACATTCTCGTTGTGAACGATTAGATTCTTATATTCTTCATTATT
CAGATAGTCCTTGAACCATTGATGTTTCTTGAGTTTTTTTAAATTTTCACCTATATGCTCTCCCGTCACTATTTTTCGAAACGGAAAAAGTTGTATGAAA
ACAAGGAAAGCGAAGATGAACAAATAAAATAATGCTTTCAAACAATCCCTCCTCTATAAAAGTGTCTACAAGAAATACGTTTGAAAAGGTAAGAAGTTTC
GTATTTCTTTATATATATTATAACAGAAGATTCAATTTATATTATTTCTATAAAAAACAACAAAGTTTGCGAAAACAGCC
GATTTCAGCGATTTAACTAAATCAGAGCAGTTAGCGTTGTTTACCGCTATGAAACAGGATTTATTTCCAGAAGAACCAGACAAAATCACTAAATTGCTCA
AAACCATTCGTGAGGCTCGGTTTGCTTCGGGTATGGCTTGTGTTCATTGTGGCAGTATGTCTGTGAAACGTAATGGTAAATATAGGTCAAGACAACGCTA
TCTATGTAAGGATTGTGGAAAGTCTTTCAATGATATGACTAATACTCCGTTTTCAGGCTCACGATACCCTGAAAAATGGGTAACATACATTGAACTAATG
GTAGAAGGCTACACTCTACCCAAAATCGCTAAACGTCTACAAATACACATATCCACTGCATTTTATTGGAGACATAAAATCTTGAACGCATTAGGCAGTC
TTGGATTTAATCAACTACAAGGGATAGTTGAAAGTGACGAAACCTTCTTTCGTGAGTCTTTAAAAGGTCGTGAAGTCTCACATAGGAAAGCAAAGAAGCG
TGGAGAAAAGGACAAAAAGAGAGGAATTTCTAACTCTAAAATTGCTGTGGTAGTGGCACAAGACCGCAACGGAAACCTTATTGCTCGAAAAGCAGGAACG
GGACGTGTTAAGGCTGAAGAAATTGATGATGTGATAGGTAAGCATATTCACCCGTCTGCTTTGTTATGTACAGATACTGCAACCAATTATAAGAGGTTTG
CTAAACTCAAAGGTTTACTACACGAAACTGTCAATGAACGCCAAAAACAACGTGTCAAGAAAGGTATCTATCATATCCAACACGTAAATAACTCTCACAG
CCGTCTGAAGGGATGGATGGAGCGTTTTCAAGGTGTAGCGACTAAATACTTGGATAACTACCTTTATTGGTTTCGTTGGCTTGATTTAAGCAAGGATTTA
GCATTCGATAAACAGGTAGAGCGAATGCTTGTTTCAGCGTGTCAAAAGTCAAATTATAAAACTGTCCAGATGTTAAGGGGTGCATAAAAAAGACCTCTTC
GCTGAGGTCTTTTTCAGAAATTAGTTCTTTTCAATTTCTGCTTAGTTTGCACTATGCAGTTCTCTAACTAAGACTTGGTTCAACTTCTTTTTGCACTTAA
CTAAATAGGATTCTCTACCAAGTTTGTTGGTATTAAAACTACCAATAGTTTTACGGACATTCTCGTTGTGAACGATTAGATTCTTATATTCTTCATTATT
CAGATAGTCCTTGAACCATTGATGTTTCTTGAGTTTTTTTAAATTTTCACCTATATGCTCTCCCGTCACTATTTTTCGAAACGGAAAAAGTTGTATGAAA
ACAAGGAAAGCGAAGATGAACAAATAAAATAATGCTTTCAAACAATCCCTCCTCTATAAAAGTGTCTACAAGAAATACGTTTGAAAAGGTAAGAAGTTTC
GTATTTCTTTATATATATTATAACAGAAGATTCAATTTATATTATTTCTATAAAAAACAACAAAGTTTGCGAAAACAGCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1008 bp | 335 aa | 80 | 1087 | + | No |
Chemistry : DDE
ORF sequence :
MWKDVYEDFSDLTKSEQLALFTAMKQDLFPEEPDKITKLLKTIREARFASGMACVHCGSMSVKRNGKYRSRQRYLCKDCGKSFNDMTNTPFSGSRYPEKW
VTYIELMVEGYTLPKIAKRLQIHISTAFYWRHKILNALGSLGFNQLQGIVESDETFFRESLKGREVSHRKAKKRGEKDKKRGISNSKIAVVVAQDRNGNL
IARKAGTGRVKAEEIDDVIGKHIHPSALLCTDTATNYKRFAKLKGLLHETVNERQKQRVKKGIYHIQHVNNSHSRLKGWMERFQGVATKYLDNYLYWFRW
LDLSKDLAFDKQVERMLVSACQKSNYKTVQMLRGA
VTYIELMVEGYTLPKIAKRLQIHISTAFYWRHKILNALGSLGFNQLQGIVESDETFFRESLKGREVSHRKAKKRGEKDKKRGISNSKIAVVVAQDRNGNL
IARKAGTGRVKAEEIDDVIGKHIHPSALLCTDTATNYKRFAKLKGLLHETVNERQKQRVKKGIYHIQHVNNSHSRLKGWMERFQGVATKYLDNYLYWFRW
LDLSKDLAFDKQVERMLVSACQKSNYKTVQMLRGA
Blast result :
Comments
ISBath1 is 79% aa similar to ISBsp1.
References
1] ISfinder annotation (2016)
2] Verma,A., Khatri,I., Mual,P., Subramanian,S. and Krishnamurthi,S. (2014) Direct GenBank submission.
2] Verma,A., Khatri,I., Mual,P., Subramanian,S. and Krishnamurthi,S. (2014) Direct GenBank submission.