ISBath1

  • Family IS1595
  • Group ISPna2
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
JWIQ02000033 ND Bacillus thermotolerans
Bacillus thermotolerans SGZ-8
Bacillaceae bacterium MTCC 10057
DNA section
IS Length : 1580 bp

Ends


IR Length : 22/27

IRL : GGCTGTTTTCGTATAGATTGTTGCTTTCTTGACCAAACTTGTAGAAGGCT
IRR : GGCTGTTTTCGCAAACTTTGTTGTTTTTTATAGAAATAATATAAATTGAA

Insertion site


Left flankDirect repeatRight flankDR Length
CGAATGTCCCTTATTATTTAAAAATGAACAAA8

DNA sequence

GGCTGTTTTCGTATAGATTGTTGCTTTCTTGACCAAACTTGTAGAAGGCTTGTATAATAGGGTTTAGGAGGCGTTCAGTATGTGGAAAGATGTATATGAA
GATTTCAGCGATTTAACTAAATCAGAGCAGTTAGCGTTGTTTACCGCTATGAAACAGGATTTATTTCCAGAAGAACCAGACAAAATCACTAAATTGCTCA
AAACCATTCGTGAGGCTCGGTTTGCTTCGGGTATGGCTTGTGTTCATTGTGGCAGTATGTCTGTGAAACGTAATGGTAAATATAGGTCAAGACAACGCTA
TCTATGTAAGGATTGTGGAAAGTCTTTCAATGATATGACTAATACTCCGTTTTCAGGCTCACGATACCCTGAAAAATGGGTAACATACATTGAACTAATG
GTAGAAGGCTACACTCTACCCAAAATCGCTAAACGTCTACAAATACACATATCCACTGCATTTTATTGGAGACATAAAATCTTGAACGCATTAGGCAGTC
TTGGATTTAATCAACTACAAGGGATAGTTGAAAGTGACGAAACCTTCTTTCGTGAGTCTTTAAAAGGTCGTGAAGTCTCACATAGGAAAGCAAAGAAGCG
TGGAGAAAAGGACAAAAAGAGAGGAATTTCTAACTCTAAAATTGCTGTGGTAGTGGCACAAGACCGCAACGGAAACCTTATTGCTCGAAAAGCAGGAACG
GGACGTGTTAAGGCTGAAGAAATTGATGATGTGATAGGTAAGCATATTCACCCGTCTGCTTTGTTATGTACAGATACTGCAACCAATTATAAGAGGTTTG
CTAAACTCAAAGGTTTACTACACGAAACTGTCAATGAACGCCAAAAACAACGTGTCAAGAAAGGTATCTATCATATCCAACACGTAAATAACTCTCACAG
CCGTCTGAAGGGATGGATGGAGCGTTTTCAAGGTGTAGCGACTAAATACTTGGATAACTACCTTTATTGGTTTCGTTGGCTTGATTTAAGCAAGGATTTA
GCATTCGATAAACAGGTAGAGCGAATGCTTGTTTCAGCGTGTCAAAAGTCAAATTATAAAACTGTCCAGATGTTAAGGGGTGCATAAAAAAGACCTCTTC
GCTGAGGTCTTTTTCAGAAATTAGTTCTTTTCAATTTCTGCTTAGTTTGCACTATGCAGTTCTCTAACTAAGACTTGGTTCAACTTCTTTTTGCACTTAA
CTAAATAGGATTCTCTACCAAGTTTGTTGGTATTAAAACTACCAATAGTTTTACGGACATTCTCGTTGTGAACGATTAGATTCTTATATTCTTCATTATT
CAGATAGTCCTTGAACCATTGATGTTTCTTGAGTTTTTTTAAATTTTCACCTATATGCTCTCCCGTCACTATTTTTCGAAACGGAAAAAGTTGTATGAAA
ACAAGGAAAGCGAAGATGAACAAATAAAATAATGCTTTCAAACAATCCCTCCTCTATAAAAGTGTCTACAAGAAATACGTTTGAAAAGGTAAGAAGTTTC
GTATTTCTTTATATATATTATAACAGAAGATTCAATTTATATTATTTCTATAAAAAACAACAAAGTTTGCGAAAACAGCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1008 bp335 aa801087+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MWKDVYEDFSDLTKSEQLALFTAMKQDLFPEEPDKITKLLKTIREARFASGMACVHCGSMSVKRNGKYRSRQRYLCKDCGKSFNDMTNTPFSGSRYPEKW
VTYIELMVEGYTLPKIAKRLQIHISTAFYWRHKILNALGSLGFNQLQGIVESDETFFRESLKGREVSHRKAKKRGEKDKKRGISNSKIAVVVAQDRNGNL
IARKAGTGRVKAEEIDDVIGKHIHPSALLCTDTATNYKRFAKLKGLLHETVNERQKQRVKKGIYHIQHVNNSHSRLKGWMERFQGVATKYLDNYLYWFRW
LDLSKDLAFDKQVERMLVSACQKSNYKTVQMLRGA

 

Blast result :
Comments
ISBath1 is 79% aa similar to ISBsp1.
References
1] ISfinder annotation (2016)
2] Verma,A., Khatri,I., Mual,P., Subramanian,S. and Krishnamurthi,S. (2014) Direct GenBank submission.