ISBsp8

  • Family IS1595
  • Group ISPna2
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
LVVJ01000045 ND Bacillus sp.
Bacillus sp. GZT
DNA section
IS Length : 1761 bp

Ends


IR Length : 22/27

IRL : GGCTCTGTTAAAAAAGATTGTTGATAATGACTAACACCTGAAAATTTTGG
IRR : GGCTCTGTTAAAGTAAATTATTGGTAAACGATATCTAAAAACCACCCAAG

Insertion site


Left flankDirect repeatRight flankDR Length
AAGATATTTCTTTTCGTTAAAATGCGGAAAT8

DNA sequence

GGCTCTGTTAAAAAAGATTGTTGATAATGACTAACACCTGAAAATTTTGGTTATACTATATTTATATAAACCAATTGGGAGTGTGTTTGTAATAATGAAA
GCCTTTCGTAATTTACTAAATCACATTAATAAAATCGATTCTCGTCAGCAAGAGCAATTATTTTGGACATTGAAAAATAAACTCTTTCCAATTGTTCAAT
CGGGTTCTCTTGTGAAAGAAATGAGAGAAACTCGTTTTGCCGAAGGATTCGTTTGTCCACATTGCACAAGTCAATTTGTCGTCCGATTTGGTAAATATAG
AGGTCGTCAACGTTATCGTTGTAAGGCTTGCTGTAAAACGTTCAATGATTTAACTAACACTCCTATGCACGGCACACGTTACCCAAAATTCTGGGCAGAG
TTCATTAAATTGATGTTTGAAGGGCTCTCTCTTCGTAAATGCGAACAAATATTAGGAATCAAATGGGTTACACTCTTTTATTGGCGACACAAAATATTAA
ATGCACTAAAAGAAATCGAGATTGAAGGGTTTGAAGGTATCGTTGAAGTGGACGAGACCTATTTCCTGTACTCTGAAAAGGGAAAGAAAGGTATCGTTGG
TCGTAAAGCTCGTAAACGTGGTGGAGTATCAAAATATCGTGGCATTAGTCGTGAACAAGTTTGTATATTGGTAGCTCGTGACCGCAACAAACAAACGGTA
TCAAAAGTAACTTGTATGGGACGAATTGTGAAATTAAAAGTAGAAGAAACCATTGGACATTTATTAGATGTGGATACTATTCTTTGTACAGATGCTTGGA
GAGCGTACATGACGTATGCAAAAGAAAAAGGCTTGGAACATTATCGTATTAATACATCAAAAACAGGTCATGTCATTAAAGGTATTTATCACATTCAAAA
TGTGAACGGTTATCACGCTCGTTTAAGTCATTGGATTGACCGATTTAAAGGTGTGGCGACAAAATACCTTGATAACTATTTGATATGGTTTCAATTTCTT
GAAATGAAGGGGTTTGACGCAACAACAGCGAATATAAAAGAAGTGTTTGTGAGTATGAGTTTGTGTGAACAACACATGACGAATGAACAAATTCGTCTCT
CACCTTTAACCATATAAATGGTTTTATAACTTGTAAAAAAACCTTTTTTACAAGTTATCAGAATTGCATCGTAATGGAGGATTATTATGTCAATGAATCA
TGAATTGCTCGCCAAATTTCTAGTAGAAGCCAAAAGAAAGACATATGCATCCCAGGGAGATGATGCATCGGTTCAGCCGTTATTAAACGGTTCAAAACAA
CTTGAATACTCTAGTGGTAATTATTCTTATCGAGATATTTATTATGGTTCAGCTTTTTTTATCGGACAAGAAACAGTAGAGTTTGAGAATCGTCCAATTT
GGTCAATGGTCTATTCAGGTGGTGTCACCATTCCAAACGCAGATTGGGATATCATGGGTCCAATTTATAGCTTCCTTCGCCAAGCATTAAGGTTAGTTGA
TACAAATTCTATCTATCGTGGTCCAAATTATTACGAGTCAGGTACATATATTTTCAAGAATGAGTATGAAGGAACTCTTGATTGTTTTCACGGTAAAGAA
ATCATTCTCATAGGTGATGAAAAGGTGTATGAATTGAGATACAACGGAGGAATAGTACGATAATTATTCTGATGAAACAACAAAAAGAGCCAAAGAAAAA
CCACCTAATAGCTTGGGTGGTTTTTAGATATCGTTTACCAATAATTTACTTTAACAGAGCC
Protein section
ORF number : 2

 

ORF 1
LengthBeginEndStrandFusion ORF
1023 bp341 aa951117+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MMKAFRNLLNHINKIDSRQQEQLFWTLKNKLFPIVQSGSLVKEMRETRFAEGFVCPHCTSQFVVRFGKYRGRQRYRCKACCKTFNDLTNTPMHGTRYPKF
WAEFIKLMFEGLSLRKCEQILGIKWVTLFYWRHKILNALKEIEIEGFEGIVEVDETYFLYSEKGKKGIVGRKARKRGGVSKYRGISREQVCILVARDRNK
QTVSKVTCMGRIVKLKVEETIGHLLDVDTILCTDAWRAYMTYAKEKGLEHYRINTSKTGHVIKGIYHIQNVNGYHARLSHWIDRFKGVATKYLDNYLIWF
QFLEMKGFDATTANIKEVFVSMSLCEQHMTNEQIRLSPLTI

 

Blast result :
ORF 2
LengthBeginEndStrandFusion ORF
477 bp158 aa11871663+No
ORF function : Passenger Gene
Annotation : Hypothetical proteinDescription :

ORF sequence :

MSMNHELLAKFLVEAKRKTYASQGDDASVQPLLNGSKQLEYSSGNYSYRDIYYGSAFFIGQETVEFENRPIWSMVYSGGVTIPNADWDIMGPIYSFLRQA
LRLVDTNSIYRGPNYYESGTYIFKNEYEGTLDCFHGKEIILIGDEKVYELRYNGGIVR

 

Blast result :
Comments
ISBsp8 is 74% aa similar to ISBko1.
References
1] ISfinder annotation (2016)
2] Liang,Z., Li,G., An,T. and Das,R. (2016) Direct GenBank submission.