ISNasp1
- Family IS1595
- Group ISH4
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
MASN01000048 | ND | Natrialba sp. | Natrialba sp. SSL1 |
DNA section
IS Length : 1046 bp
Ends
IR Length : 26/33
IRL : CGCTCTTGTGTAGACCTACGGAAAGACCCTATAGTTACACTAAGCCAGCC
IRR : CGCTCTTATGTAGAGCTGTGGAATGCCCCGATAACGAGACAATCAATGGC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
TCCTCTTCCC | CGCCATCT | TAACCAACAA | 8 |
DNA sequence
CGCTCTTGTGTAGACCTACGGAAAGACCCTATAGTTACACTAAGCCAGCCATAATCTTGGAGTATGTCTTCTGCTCAGCCGGCGTTCGGAGCAATGTTTC
GAGAGCTGATCGAGCTGGGCGTCGTCGAGATTGACACGGAGCCGCTCGATGCCCGCATCGAGCGGCGACTCAAGGAATTCTGGGAGAATACGTCCTGTCC
ACGGTGCGGGCACACCACCGTTCAAACGTGGCCACATCTCGACCGCGTGTGGTGCCGTAACTGCAATTTCAAGCCGGTCTACACCTACGGAACGCCGTTT
CACGAGAAGCACCTCTCCAGTGGCGAGGTGCTTCTCGCGTTCACGCTCTACGCCGATACATTGCTCAGTATTAACCAGATCGCGTCCTTGCTCAGTCGGG
CCTACAAAACCGTTCATACGGCGATTCGAGAGGTGGAAGCCGCGATCCATCGCGGCTTCCCCGTCGTCTGGAATCTCCTTGACCAGACCATCGATGGACC
GTCACAAGTCGACGAATCTGGCACAGTCTGTTCGGGCTACAAAGGCCAAGAGCCGCCGCGGAACAGTCGTTCTCGCGGCGGCTCGTCTCAATCTGGCCGC
TCACGCTGGCGGGGCCGCCATGGTGCTCAGTTGACGCTCGTCGCGGCGTGCCGCGACTCGCTTCGCGTGATCCGCGGCCAGCTCGGTATTGACTTCGGCG
GTGATCTGAAACCAGTGATTCAGGAGGCTGAAGACCTCTCCCAGCGGCTGGGAGAGGTCTGGACCGACGGACTCCAAGCCTACAGAGAGATGGAGCGTGA
CCACCGAACAGTCGTACACAAAGAGAGATACGTATCGCCCGACGGCGTCCACATTAACCAGGCTGAGTGCCTCTTTTCGCTCGTTCAACCGTGGCTACGG
AAGTTCCGCGGCCTGTCCAAGCAGGGCTTGGAACTGGCCGCTCACACCTTCGGTATCGTTCGCTCACTCACTCTGGCTGGCGAATCTGTCGAGTCAGCCA
TTGATTGTCTCGTTATCGGGGCATTCCACAGCTCTACATAAGAGCG
GAGAGCTGATCGAGCTGGGCGTCGTCGAGATTGACACGGAGCCGCTCGATGCCCGCATCGAGCGGCGACTCAAGGAATTCTGGGAGAATACGTCCTGTCC
ACGGTGCGGGCACACCACCGTTCAAACGTGGCCACATCTCGACCGCGTGTGGTGCCGTAACTGCAATTTCAAGCCGGTCTACACCTACGGAACGCCGTTT
CACGAGAAGCACCTCTCCAGTGGCGAGGTGCTTCTCGCGTTCACGCTCTACGCCGATACATTGCTCAGTATTAACCAGATCGCGTCCTTGCTCAGTCGGG
CCTACAAAACCGTTCATACGGCGATTCGAGAGGTGGAAGCCGCGATCCATCGCGGCTTCCCCGTCGTCTGGAATCTCCTTGACCAGACCATCGATGGACC
GTCACAAGTCGACGAATCTGGCACAGTCTGTTCGGGCTACAAAGGCCAAGAGCCGCCGCGGAACAGTCGTTCTCGCGGCGGCTCGTCTCAATCTGGCCGC
TCACGCTGGCGGGGCCGCCATGGTGCTCAGTTGACGCTCGTCGCGGCGTGCCGCGACTCGCTTCGCGTGATCCGCGGCCAGCTCGGTATTGACTTCGGCG
GTGATCTGAAACCAGTGATTCAGGAGGCTGAAGACCTCTCCCAGCGGCTGGGAGAGGTCTGGACCGACGGACTCCAAGCCTACAGAGAGATGGAGCGTGA
CCACCGAACAGTCGTACACAAAGAGAGATACGTATCGCCCGACGGCGTCCACATTAACCAGGCTGAGTGCCTCTTTTCGCTCGTTCAACCGTGGCTACGG
AAGTTCCGCGGCCTGTCCAAGCAGGGCTTGGAACTGGCCGCTCACACCTTCGGTATCGTTCGCTCACTCACTCTGGCTGGCGAATCTGTCGAGTCAGCCA
TTGATTGTCTCGTTATCGGGGCATTCCACAGCTCTACATAAGAGCG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
978 bp | 325 aa | 64 | 1041 | + | No |
Chemistry : DDE
ORF sequence :
MSSAQPAFGAMFRELIELGVVEIDTEPLDARIERRLKEFWENTSCPRCGHTTVQTWPHLDRVWCRNCNFKPVYTYGTPFHEKHLSSGEVLLAFTLYADTL
LSINQIASLLSRAYKTVHTAIREVEAAIHRGFPVVWNLLDQTIDGPSQVDESGTVCSGYKGQEPPRNSRSRGGSSQSGRSRWRGRHGAQLTLVAACRDSL
RVIRGQLGIDFGGDLKPVIQEAEDLSQRLGEVWTDGLQAYREMERDHRTVVHKERYVSPDGVHINQAECLFSLVQPWLRKFRGLSKQGLELAAHTFGIVR
SLTLAGESVESAIDCLVIGAFHSST
LSINQIASLLSRAYKTVHTAIREVEAAIHRGFPVVWNLLDQTIDGPSQVDESGTVCSGYKGQEPPRNSRSRGGSSQSGRSRWRGRHGAQLTLVAACRDSL
RVIRGQLGIDFGGDLKPVIQEAEDLSQRLGEVWTDGLQAYREMERDHRTVVHKERYVSPDGVHINQAECLFSLVQPWLRKFRGLSKQGLELAAHTFGIVR
SLTLAGESVESAIDCLVIGAFHSST
Blast result :
Comments
ISNasp1 is 94% aa similar to ISHsi3.
References
1] ISfinder annotation (2016)
2] Kalambe,G.N., Chandarana,P.M., Tanavde,V.M. and Upasani,V.N. (2016) Direct GenBank submission.
2] Kalambe,G.N., Chandarana,P.M., Tanavde,V.M. and Upasani,V.N. (2016) Direct GenBank submission.