ISMain1

  • Family IS1595
  • Group ISSod11
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
NZ_JMLW01000041 ND Marinospirillum insulare
Marinospirillum insulare DSM 21763
DNA section
IS Length : 1049 bp

Ends


IR Length : 24

IRL : ACGGGGTATCCCCTTAGCTCCACAAATGACAAAATGCTCAAATGAGTACT
IRR : ACGGGGTATCCCCTTAGCTCCACAGCTCTTAATTTAAAGGTTTTACTCGC

Insertion site


Left flankDirect repeatRight flankDR Length
ACCCTACTGTACAAACAACCAGCTATCT8

DNA sequence

ACGGGGTATCCCCTTAGCTCCACAAATGACAAAATGCTCAAATGAGTACTCAAAAAACCTACCCTATAGGTGGAAAAGACTATCCAACCACTTGGGTTCA
ATTCCTTGACTGGTTCCATTCTGAGCAAGCGTGCCGCAATTACTTAGAAACGCTCCGCTGGCCTGATGGACTTATTTGTCCTAAGTGTGGAGTGGTATCA
CAAGTGCAGCGAAGTAGTCGTGGTAGATTGATCTGTCCAACGTGCAGGCATCAAGCAACTGTAACTGCAGGCACTATTTTTGATAAAACTCGCACCGAAC
TTAGTGTTTGGTTCGCTGCCATTTGGTACATTACCAACCAGAAGCATGGTGTTAGCGCATTAAGTTTGCAGCGTGTACTTGGTCTTGGTAGCTATGAAAC
AGCATGGACTATGCTACACAGACTACGCCACGCAATGGTACGGCCGGATAGAGAATTGCTTCGTGGGGAGGTTGAAGTTGATGAAACCTACCTTGCACTC
TCTGACCGAACGGAGCTGTTAAGTACGAAGGGTCGGAAGAGCAACACCACCAAGCTACTGGTAGTTATAGCAGTCGAAATACTACACCCTAAAGGTTTTG
GAAGAGTTCGCATCCAACAGATTGAGCGTGGCAACCACGATAATCTAATGCCATTCATTAATGCCTCCATTGCTCCAGGATCGCTCATTCATACCGATGG
TTCTCCTGCTTACCGCCAAATCAAAGAAAATGGATACGAGCACCGACAAACAGTTCACCTTTGCTCAACCATACCAGCTCATGAGTCTATGCCAGGCGTT
CACCGAGTTGCATCACTTTTGCAACGTTGGATGATGGGTACACACCATGGTGCAGTACAGCCAGGACAACTGGATAATTACCTTAATGAATATGTATTTC
GATTTAATCGCCGCAAGTCTAAATCAAGGGGTTTACTGTTTTATCGCTTACTGCAGCAAGCCGTTGTGACAAAGCCTGTTACTTATCAAGATGTGGTGAA
ACAGCGAGTAAAACCTTTAAATTAAGAGCTGTGGAGCTAAGGGGATACCCCGT
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
984 bp327 aa421025+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MSTQKTYPIGGKDYPTTWVQFLDWFHSEQACRNYLETLRWPDGLICPKCGVVSQVQRSSRGRLICPTCRHQATVTAGTIFDKTRTELSVWFAAIWYITNQ
KHGVSALSLQRVLGLGSYETAWTMLHRLRHAMVRPDRELLRGEVEVDETYLALSDRTELLSTKGRKSNTTKLLVVIAVEILHPKGFGRVRIQQIERGNHD
NLMPFINASIAPGSLIHTDGSPAYRQIKENGYEHRQTVHLCSTIPAHESMPGVHRVASLLQRWMMGTHHGAVQPGQLDNYLNEYVFRFNRRKSKSRGLLF
YRLLQQAVVTKPVTYQDVVKQRVKPLN

 

Blast result :
Comments
ISMain1 is 89% aa similar to ISMrsp3.
References