ISTha4
- Family IS1595
- Group IS1595
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
JTDM01000021 | ND | Thauera sp. | Thauera sp. |
DNA section
IS Length : 1042 bp
Ends
IR Length : 21/24
IRL : cctgattagcaacgatgctcagccaggcaccccaacgggtctataCTGTA
IRR : cttgaTTAGCAATGATGTTCAGCCGACCGAATCACCCGCTGAGGCTGCGG
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
ccgggttcga | attgaatt | tggtctgaag | 8 |
DNA sequence
CCTGATTAGCAACGATGCTCAGCCAGGCACCCCAACGGGTCTATACTGTACGGAAATACAGTTTTTCTGCCGGGAGGTGCGCCATGCCGATGAACCGAAT
CCAGTTTCAAGCCGGACTGTCCATGCCCGAGTTTCTCCAGCGCTACGGAACCGAGCCGTCCTGCGAGGCGGCTTTGGAGAAGGCACGCTGGCCTGCGGGG
TTTCGGTGTCCGCGCTGTGATGGCGTTACTTACAGCCGGGTACGCGGGCGAACCTACGCGCTGTTCCAGTGCCAGGCGTGTCGACATCAAACGTCGCTGA
TCGCCGGCACCGTGATGCAGGGCACCAAACTGCCGCTGACGACCTGGTTCCTCGCGATCTACCTGATCAGCCAGGCCAAGACCGGACTGTCGGCGCTCGC
ACTCAAGCGCCACCTCGGGGTGAGCTATCCGACCGCTTGGCTCATCCACCACAAACTGATGCAGGCGATGGCCGATCGTGAGACGCGTTACGTGCTCGAT
GGCCAGGTCCAGGTCGATGATGCCTACCTGGGCGGCGAGCGCAGCGGTGGCAAAGTCGGCCGGGGCTCGGAGAACAAGGCCCCGTTCGTCGCCGCCGTCT
CCCTCAGTGACGAGGGCCACCCCCTGCGCGTCAAACTCACGCCTGTCTCGAGCTTCAGCATGGTCGCAATCGGCCAGTGGGCCAAGACCCATCTGGCTCC
GGGCAGCACCGTGTTCTCCGATGGACTGGCCTGCTTCGGTGCGGTGAGCGGTGCAGGTTGTGCGCATCAGCCAACCGTCGTCGGCAAGCGCAAACCGAAG
GACTTGCCCGAGTTCCAGTGGATCAACACCGTACTCGGTAACCTCAAGACGAGTTTGAGCGGCAGCTACCATGCGTTCGACTTCCGCAAATACGCAACGC
GATACCTGGCCGCGTTCACCTACCGATTCGACCGCCGATTCGATCTGCGCGCGCTTCACACGCGACTGCTCGTGGCTGCCGCCACCTGTGTGCCGCAGCC
TCAGCGGGTGATTCGGTCGGCTGAACATCATTGCTAATCAAG
CCAGTTTCAAGCCGGACTGTCCATGCCCGAGTTTCTCCAGCGCTACGGAACCGAGCCGTCCTGCGAGGCGGCTTTGGAGAAGGCACGCTGGCCTGCGGGG
TTTCGGTGTCCGCGCTGTGATGGCGTTACTTACAGCCGGGTACGCGGGCGAACCTACGCGCTGTTCCAGTGCCAGGCGTGTCGACATCAAACGTCGCTGA
TCGCCGGCACCGTGATGCAGGGCACCAAACTGCCGCTGACGACCTGGTTCCTCGCGATCTACCTGATCAGCCAGGCCAAGACCGGACTGTCGGCGCTCGC
ACTCAAGCGCCACCTCGGGGTGAGCTATCCGACCGCTTGGCTCATCCACCACAAACTGATGCAGGCGATGGCCGATCGTGAGACGCGTTACGTGCTCGAT
GGCCAGGTCCAGGTCGATGATGCCTACCTGGGCGGCGAGCGCAGCGGTGGCAAAGTCGGCCGGGGCTCGGAGAACAAGGCCCCGTTCGTCGCCGCCGTCT
CCCTCAGTGACGAGGGCCACCCCCTGCGCGTCAAACTCACGCCTGTCTCGAGCTTCAGCATGGTCGCAATCGGCCAGTGGGCCAAGACCCATCTGGCTCC
GGGCAGCACCGTGTTCTCCGATGGACTGGCCTGCTTCGGTGCGGTGAGCGGTGCAGGTTGTGCGCATCAGCCAACCGTCGTCGGCAAGCGCAAACCGAAG
GACTTGCCCGAGTTCCAGTGGATCAACACCGTACTCGGTAACCTCAAGACGAGTTTGAGCGGCAGCTACCATGCGTTCGACTTCCGCAAATACGCAACGC
GATACCTGGCCGCGTTCACCTACCGATTCGACCGCCGATTCGATCTGCGCGCGCTTCACACGCGACTGCTCGTGGCTGCCGCCACCTGTGTGCCGCAGCC
TCAGCGGGTGATTCGGTCGGCTGAACATCATTGCTAATCAAG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
954 bp | 317 aa | 84 | 1037 | + | No |
Chemistry : DDE
ORF sequence :
MPMNRIQFQAGLSMPEFLQRYGTEPSCEAALEKARWPAGFRCPRCDGVTYSRVRGRTYALFQCQACRHQTSLIAGTVMQGTKLPLTTWFLAIYLISQAKT
GLSALALKRHLGVSYPTAWLIHHKLMQAMADRETRYVLDGQVQVDDAYLGGERSGGKVGRGSENKAPFVAAVSLSDEGHPLRVKLTPVSSFSMVAIGQWA
KTHLAPGSTVFSDGLACFGAVSGAGCAHQPTVVGKRKPKDLPEFQWINTVLGNLKTSLSGSYHAFDFRKYATRYLAAFTYRFDRRFDLRALHTRLLVAAA
TCVPQPQRVIRSAEHHC
GLSALALKRHLGVSYPTAWLIHHKLMQAMADRETRYVLDGQVQVDDAYLGGERSGGKVGRGSENKAPFVAAVSLSDEGHPLRVKLTPVSSFSMVAIGQWA
KTHLAPGSTVFSDGLACFGAVSGAGCAHQPTVVGKRKPKDLPEFQWINTVLGNLKTSLSGSYHAFDFRKYATRYLAAFTYRFDRRFDLRALHTRLLVAAA
TCVPQPQRVIRSAEHHC
Blast result :
Comments
ISTha4 is 81% aa similar to ISTni3.
References