ISMmet1

  • Family IS1595
  • Group IS1595
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
LUUH01000092 ND Methylomonas methanica
Methylomonas methanica R-45371
DNA section
IS Length : 1033 bp

Ends


IR Length : 30/39

IRL : CCTGATTacccacgaccctcagcaacttcgaagtatcgcgcgagtccaac
IRR : cctgaTTACCCATAAGCCTCAGCCAATTTGAGCAATCGCCCCGGCATGGG

Insertion site


Left flankDirect repeatRight flankDR Length
0

DNA sequence

CCTGATTACCCACGACCCTCAGCAACTTCGAAGTATCGCGCGAGTCCAACGAAAACCTTAACCCGCCTGGAGATCGTGCCATGAAAAAGAACCCGATCCA
ATTTCAAAAAGGCTTCAGTCTGACAGATTTCATAAAGCGATACGGTGCTGAAAGCCAGTGCGCCGAAGCGCTATTTCAGGCGCGATGGCCTAGCGGTTTT
CAATGTCCTGACTGCGGCGGTCGTCATTACAGCGCAATCAAAACACGCCGCTTATATCAGTGCACGGCTTGTCATCACCAAACCTCGCTGATCAGCGGGA
CGCTGTTTGAACAAACCAAGCTGCCGCTCACCGTGTGGTTTCTGGCGATCCACCTGCTCACGCAGGCCAAAACGGCTTTGTCGGCCTTGGCATTGATGCG
GCAAATCGGCGTGTCTTACAACACCGCCTGGAGCGTCAAGCACAAGATCATGCAGGCGATGAAAGAGCGGGATGACCGCAAGCCGCTGACCGGCATCATT
CAACTCGATGACGTTTACTGGGGCGGCGAGCATCGCGGCGGCAAACGCGGGCGAGGCTCCCAAAATAAGACCCCTTTTGTGGCGGCGGTGGCGCTCAACG
AAGCGCATCAGCCCATTGCCATGAACTTAAACGTTGTCAAAGGCTTCCGAACCACCGAAATCAAACGTTGGGCCGGTAAACATCTTGAGCCGGGTAGCCT
GGTATATTCCGACGGTCTGGCCTGTTTTTCCGCCGTGCTCGATCATGGCTGTCACCACTATTCCATCGTCACCGGCGGCGGCCCAGACAGCGTAACCAAA
GAAGAATTCACCTGGGTCAATACCATGATCGGCAACATAAAGCGCTCAATCAACGGTACTTACCACGCCATCAATCCCAAACATTTGCCGCGTTATCTGG
CCGAGTTTTGTTATCGCTTTAACCGCCGATTCGATTTGCAAGCCATGATGCCCCGGTTTCTAGTCGCGGCGGCAAATACGCCGCCCATGCCGGGGCGATT
GCTCAAATTGGCTGAGGCTTATGGGTAATCAGG
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
948 bp315 aa811028+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MKKNPIQFQKGFSLTDFIKRYGAESQCAEALFQARWPSGFQCPDCGGRHYSAIKTRRLYQCTACHHQTSLISGTLFEQTKLPLTVWFLAIHLLTQAKTAL
SALALMRQIGVSYNTAWSVKHKIMQAMKERDDRKPLTGIIQLDDVYWGGEHRGGKRGRGSQNKTPFVAAVALNEAHQPIAMNLNVVKGFRTTEIKRWAGK
HLEPGSLVYSDGLACFSAVLDHGCHHYSIVTGGGPDSVTKEEFTWVNTMIGNIKRSINGTYHAINPKHLPRYLAEFCYRFNRRFDLQAMMPRFLVAAANT
PPMPGRLLKLAEAYG*

 

Blast result :
Comments
ISMmet1 is 77% aa similar to ISSbe1.
References