ISCap3
- Family IS1595
- Group IS1595
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP001715 | ND | Candidatus Accumulibacter | Candidatus Accumulibacter phosphatis UW-1 |
DNA section
IS Length : 1047 bp
Ends
IR Length : 21/24
IRL : CCTGATTagcaacaatcgtcagctgagcgcatctggtgagcccagcgggg
IRR : CCTGATTagcaatgagcgtcagctacccgaatcgagcgctggggccgcgg
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
aaacgggcga | aaggaaga | atgcatggcg | 8 |
DNA sequence
CCTGATTAGCAACAATCGTCAGCTGAGCGCATCTGGTGAGCCCAGCGGGGCTTAGCCTGGACTCCGTCACCACACGGAGAGCAGCACCATGGCCATGAAT
CGAATCCAGTTTCAACCCGGTTTGTCGATGCCGGAGTTCACCGAGCGCTTTGGAAGCGAGTCGCAGTGCGCCGCCGCCTTGGAGGCAGCCCGTTGGCCGA
ATGGGTTTTCCTGTCCGCGCTGCGGTGAGCACGCTCACTGTGTTCTGCGCGGGGGGTCGTGCAAGGTGTTTCAGTGCAACGCCTGTCGGCATCAAACCTC
GCTGATCGCCGGGACGGTGTTTCAGGGCACCAGGCTGCCGCTGACCGTGTGGTTCCTGGCGATCTACCTCATCAGCCAGGCCAAGACGGGTCTGTCGGCG
CTGGCGCTGAAGCGGTATCTGGGAGTGAGTTATCCCACCGCCTGGCTTATCCACCACAAGCTGATGCGGGCGATGGAACAGCGGGAAGAACGCTATGTGC
TCGATGGCCAGGTTCAGGTCGATGACGCTTACCTGGGCGGCGAACGGACGGGTGGCAAGGCGGGGCGCGGTTCGGAGAACAAGGTCCCGTTCGTGGCAGC
GGTCTCGTTCAGCGATGAGGGCCACCCCCTGCGTGCCAAACTCACGCTGGTTCCCGGTTTTACCCTGAAGGCAATTGCCGAGTGGGCCAAGAGCAACCTC
GCACCGGGATCGACGGTGCTGTCGGATGGTCTGGCTTGCTTCAACGCCGTCACCGACGCCGGCTGCGTTCATCAGCCGACCGTCGTCGCCGGGCGAAAGC
CCAAGGACTTGCCAGAGTTCAAGTGGGTTAACACGGTCCTGGGTAATCTCAAGACCAGCCTTTCGGGTTGCTACCACGCGCTTGCCTTTCGAAAGTATGG
CGCTCAGTACCTCGCGGCTTTCACCTACCGATTCAACCGCCGATTCGATCTCAGGACTCTGAACGAGAGGCTCCTGGTCGCCGCGGTAGCCTGCGCGCCG
CGGCCCCAGCGCTCGATTCGGGTAGCTGACGCTCATTGCTAATCAGG
CGAATCCAGTTTCAACCCGGTTTGTCGATGCCGGAGTTCACCGAGCGCTTTGGAAGCGAGTCGCAGTGCGCCGCCGCCTTGGAGGCAGCCCGTTGGCCGA
ATGGGTTTTCCTGTCCGCGCTGCGGTGAGCACGCTCACTGTGTTCTGCGCGGGGGGTCGTGCAAGGTGTTTCAGTGCAACGCCTGTCGGCATCAAACCTC
GCTGATCGCCGGGACGGTGTTTCAGGGCACCAGGCTGCCGCTGACCGTGTGGTTCCTGGCGATCTACCTCATCAGCCAGGCCAAGACGGGTCTGTCGGCG
CTGGCGCTGAAGCGGTATCTGGGAGTGAGTTATCCCACCGCCTGGCTTATCCACCACAAGCTGATGCGGGCGATGGAACAGCGGGAAGAACGCTATGTGC
TCGATGGCCAGGTTCAGGTCGATGACGCTTACCTGGGCGGCGAACGGACGGGTGGCAAGGCGGGGCGCGGTTCGGAGAACAAGGTCCCGTTCGTGGCAGC
GGTCTCGTTCAGCGATGAGGGCCACCCCCTGCGTGCCAAACTCACGCTGGTTCCCGGTTTTACCCTGAAGGCAATTGCCGAGTGGGCCAAGAGCAACCTC
GCACCGGGATCGACGGTGCTGTCGGATGGTCTGGCTTGCTTCAACGCCGTCACCGACGCCGGCTGCGTTCATCAGCCGACCGTCGTCGCCGGGCGAAAGC
CCAAGGACTTGCCAGAGTTCAAGTGGGTTAACACGGTCCTGGGTAATCTCAAGACCAGCCTTTCGGGTTGCTACCACGCGCTTGCCTTTCGAAAGTATGG
CGCTCAGTACCTCGCGGCTTTCACCTACCGATTCAACCGCCGATTCGATCTCAGGACTCTGAACGAGAGGCTCCTGGTCGCCGCGGTAGCCTGCGCGCCG
CGGCCCCAGCGCTCGATTCGGGTAGCTGACGCTCATTGCTAATCAGG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
954 bp | 317 aa | 89 | 1042 | + | No |
Chemistry : DDE
ORF sequence :
MAMNRIQFQPGLSMPEFTERFGSESQCAAALEAARWPNGFSCPRCGEHAHCVLRGGSCKVFQCNACRHQTSLIAGTVFQGTRLPLTVWFLAIYLISQAKT
GLSALALKRYLGVSYPTAWLIHHKLMRAMEQREERYVLDGQVQVDDAYLGGERTGGKAGRGSENKVPFVAAVSFSDEGHPLRAKLTLVPGFTLKAIAEWA
KSNLAPGSTVLSDGLACFNAVTDAGCVHQPTVVAGRKPKDLPEFKWVNTVLGNLKTSLSGCYHALAFRKYGAQYLAAFTYRFNRRFDLRTLNERLLVAAV
ACAPRPQRSIRVADAHC
GLSALALKRYLGVSYPTAWLIHHKLMRAMEQREERYVLDGQVQVDDAYLGGERTGGKAGRGSENKVPFVAAVSFSDEGHPLRAKLTLVPGFTLKAIAEWA
KSNLAPGSTVLSDGLACFNAVTDAGCVHQPTVVAGRKPKDLPEFKWVNTVLGNLKTSLSGCYHALAFRKYGAQYLAAFTYRFNRRFDLRTLNERLLVAAV
ACAPRPQRSIRVADAHC
Blast result :
Comments
ISCap3 is 83% aa similar to ISTni3.
References