ISBeb1
- Family IS1595
- Group IS1595
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
MEQR01000099 | ND | Betaproteobacteria bacterium | Betaproteobacteria bacterium |
DNA section
IS Length : 1042 bp
Ends
IR Length : 24/27
IRL : CCTGATTAGCCCCCTACCTCAGCaggctcacgtagtgagccagtaggggg
IRR : cctgattagcccccaacctcagcCAGCCTAATCACGCTTTCAGGGCGCGG
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
GGGGAAACCC TAAAGACTTT | TAAATCTTTG AGTTGCGCCT | 0 |
DNA sequence
CCTGATTAGCCCCCTACCTCAGCAGGCTCACGTAGTGAGCCAGTAGGGGGCGGAAAATAAGCACATCTTTTTTGAGGAGGTGTGCGATGTCGATCAATCA
TGTGCAGTTTCAAAAGGGCCTGTCGATGGCGGCGTTTATGGACAAGTACGGGACACAGAAGAAGTGCCACGCCGCACTGGTTGCCTCGCGCTGGCCGGAG
GGGTTTCGCTGCCCGTGCTGCGGGGATGATCGGCACACTACCTTTGTGCGCGAAAACCGGCAGTACTGGCAATGCCACCGCTGTCGGCACCAGACCACCG
TCACGGCGGGAACGATCTTCGAAGCTACCAAACTGCCGCTCACCCGCTGGTTTCTCGCCATGCACCTGATGACCCAAGCCAAGAACAATGTCTCCACGCT
GGAACTCAAGCGCCACCTGGGCGTGCGCTATAAGGCCGCTTGGTTGATGAAGCACAAGCTGCTGCAAGTCATGGCCGAGCGGGAAGATCGGCGCGTGCTC
GATGGGCGCGTCGAAATCGACGACGCTTATCTGGGCGGGGAGAAGCCGGGCAAGCATGGCCGGGGTTCGGAAAACAAAGTCTCTTTTATTGCTGCGGTGC
AAACAACCGATGATGGCCAGCCGGTGCTGGCTTGTTTTAGCCGTATCCCCTTCACCAAAGAGGCGTTGGCGGCGTGGGCCAATAAAACGCTGGCGGCTAG
CGCCCGTGTGGTTTCGGACGGGCTGCATTGCTTCAAAGGGATAGCTGGGGAGGTCGCAAGCCATACGGCGATCACGGTCGGCTCGGGACGGCAAGCGGTC
AAGCGCCCGGAATTCAATCGGGTGAATACGCTGCTGTCGAATCTTAAGACCGCGATCTCGGGGACTTATCATGCGTTTAAATTCGCTAAGTATGTGCATC
GTTACCTTGCCGAGGTGCAATATCGTTTCAATCGTCGCTTCGATCTCAGCTCCATCTTGGTTCGCCTTGTTCGTGTGGCTGCTAGTACAGGCCCGCGCCC
TGAAAGCGTGATTAGGCTGGCTGAGGTTGGGGGCTAATCAGG
TGTGCAGTTTCAAAAGGGCCTGTCGATGGCGGCGTTTATGGACAAGTACGGGACACAGAAGAAGTGCCACGCCGCACTGGTTGCCTCGCGCTGGCCGGAG
GGGTTTCGCTGCCCGTGCTGCGGGGATGATCGGCACACTACCTTTGTGCGCGAAAACCGGCAGTACTGGCAATGCCACCGCTGTCGGCACCAGACCACCG
TCACGGCGGGAACGATCTTCGAAGCTACCAAACTGCCGCTCACCCGCTGGTTTCTCGCCATGCACCTGATGACCCAAGCCAAGAACAATGTCTCCACGCT
GGAACTCAAGCGCCACCTGGGCGTGCGCTATAAGGCCGCTTGGTTGATGAAGCACAAGCTGCTGCAAGTCATGGCCGAGCGGGAAGATCGGCGCGTGCTC
GATGGGCGCGTCGAAATCGACGACGCTTATCTGGGCGGGGAGAAGCCGGGCAAGCATGGCCGGGGTTCGGAAAACAAAGTCTCTTTTATTGCTGCGGTGC
AAACAACCGATGATGGCCAGCCGGTGCTGGCTTGTTTTAGCCGTATCCCCTTCACCAAAGAGGCGTTGGCGGCGTGGGCCAATAAAACGCTGGCGGCTAG
CGCCCGTGTGGTTTCGGACGGGCTGCATTGCTTCAAAGGGATAGCTGGGGAGGTCGCAAGCCATACGGCGATCACGGTCGGCTCGGGACGGCAAGCGGTC
AAGCGCCCGGAATTCAATCGGGTGAATACGCTGCTGTCGAATCTTAAGACCGCGATCTCGGGGACTTATCATGCGTTTAAATTCGCTAAGTATGTGCATC
GTTACCTTGCCGAGGTGCAATATCGTTTCAATCGTCGCTTCGATCTCAGCTCCATCTTGGTTCGCCTTGTTCGTGTGGCTGCTAGTACAGGCCCGCGCCC
TGAAAGCGTGATTAGGCTGGCTGAGGTTGGGGGCTAATCAGG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
951 bp | 316 aa | 87 | 1037 | + | No |
Chemistry : DDE
ORF sequence :
MSINHVQFQKGLSMAAFMDKYGTQKKCHAALVASRWPEGFRCPCCGDDRHTTFVRENRQYWQCHRCRHQTTVTAGTIFEATKLPLTRWFLAMHLMTQAKN
NVSTLELKRHLGVRYKAAWLMKHKLLQVMAEREDRRVLDGRVEIDDAYLGGEKPGKHGRGSENKVSFIAAVQTTDDGQPVLACFSRIPFTKEALAAWANK
TLAASARVVSDGLHCFKGIAGEVASHTAITVGSGRQAVKRPEFNRVNTLLSNLKTAISGTYHAFKFAKYVHRYLAEVQYRFNRRFDLSSILVRLVRVAAS
TGPRPESVIRLAEVGG
NVSTLELKRHLGVRYKAAWLMKHKLLQVMAEREDRRVLDGRVEIDDAYLGGEKPGKHGRGSENKVSFIAAVQTTDDGQPVLACFSRIPFTKEALAAWANK
TLAASARVVSDGLHCFKGIAGEVASHTAITVGSGRQAVKRPEFNRVNTLLSNLKTAISGTYHAFKFAKYVHRYLAEVQYRFNRRFDLSSILVRLVRVAAS
TGPRPESVIRLAEVGG
Blast result :
Comments
ISBeb1 is 77% aa similar to ISCARN94.
References