ISBeb1

  • Family IS1595
  • Group IS1595
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
MEQR01000099 ND Betaproteobacteria bacterium
Betaproteobacteria bacterium
DNA section
IS Length : 1042 bp

Ends


IR Length : 24/27

IRL : CCTGATTAGCCCCCTACCTCAGCaggctcacgtagtgagccagtaggggg
IRR : cctgattagcccccaacctcagcCAGCCTAATCACGCTTTCAGGGCGCGG

Insertion site


Left flankDirect repeatRight flankDR Length
GGGGAAACCC TAAAGACTTTTAAATCTTTG AGTTGCGCCT0

DNA sequence

CCTGATTAGCCCCCTACCTCAGCAGGCTCACGTAGTGAGCCAGTAGGGGGCGGAAAATAAGCACATCTTTTTTGAGGAGGTGTGCGATGTCGATCAATCA
TGTGCAGTTTCAAAAGGGCCTGTCGATGGCGGCGTTTATGGACAAGTACGGGACACAGAAGAAGTGCCACGCCGCACTGGTTGCCTCGCGCTGGCCGGAG
GGGTTTCGCTGCCCGTGCTGCGGGGATGATCGGCACACTACCTTTGTGCGCGAAAACCGGCAGTACTGGCAATGCCACCGCTGTCGGCACCAGACCACCG
TCACGGCGGGAACGATCTTCGAAGCTACCAAACTGCCGCTCACCCGCTGGTTTCTCGCCATGCACCTGATGACCCAAGCCAAGAACAATGTCTCCACGCT
GGAACTCAAGCGCCACCTGGGCGTGCGCTATAAGGCCGCTTGGTTGATGAAGCACAAGCTGCTGCAAGTCATGGCCGAGCGGGAAGATCGGCGCGTGCTC
GATGGGCGCGTCGAAATCGACGACGCTTATCTGGGCGGGGAGAAGCCGGGCAAGCATGGCCGGGGTTCGGAAAACAAAGTCTCTTTTATTGCTGCGGTGC
AAACAACCGATGATGGCCAGCCGGTGCTGGCTTGTTTTAGCCGTATCCCCTTCACCAAAGAGGCGTTGGCGGCGTGGGCCAATAAAACGCTGGCGGCTAG
CGCCCGTGTGGTTTCGGACGGGCTGCATTGCTTCAAAGGGATAGCTGGGGAGGTCGCAAGCCATACGGCGATCACGGTCGGCTCGGGACGGCAAGCGGTC
AAGCGCCCGGAATTCAATCGGGTGAATACGCTGCTGTCGAATCTTAAGACCGCGATCTCGGGGACTTATCATGCGTTTAAATTCGCTAAGTATGTGCATC
GTTACCTTGCCGAGGTGCAATATCGTTTCAATCGTCGCTTCGATCTCAGCTCCATCTTGGTTCGCCTTGTTCGTGTGGCTGCTAGTACAGGCCCGCGCCC
TGAAAGCGTGATTAGGCTGGCTGAGGTTGGGGGCTAATCAGG
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
951 bp316 aa871037+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MSINHVQFQKGLSMAAFMDKYGTQKKCHAALVASRWPEGFRCPCCGDDRHTTFVRENRQYWQCHRCRHQTTVTAGTIFEATKLPLTRWFLAMHLMTQAKN
NVSTLELKRHLGVRYKAAWLMKHKLLQVMAEREDRRVLDGRVEIDDAYLGGEKPGKHGRGSENKVSFIAAVQTTDDGQPVLACFSRIPFTKEALAAWANK
TLAASARVVSDGLHCFKGIAGEVASHTAITVGSGRQAVKRPEFNRVNTLLSNLKTAISGTYHAFKFAKYVHRYLAEVQYRFNRRFDLSSILVRLVRVAAS
TGPRPESVIRLAEVGG

 

Blast result :
Comments
ISBeb1 is 77% aa similar to ISCARN94.
References