ISTars1
- Family IS1182
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
FP475956 | ND | Thiomonas arsenitoxydans | Thiomonas arsenitoxydans 3As |
DNA section
IS Length : 1656 bp
Ends
IR Length : 16/22
IRL : GAGTCTGTGAACATTTGATTTTGATGGCACGAATGCTGCGTGTCTTTGGG
IRR : GTGCCTGTGAACGTTTCAACTTCCGCGATGATCTCAACGCATCGAGACGC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CTCAGCCGCCCGTTGATC | TCA | CTCGGCATGGCCGGCAAATC | 3 |
DNA sequence
GAGTCTGTGAACATTTGATTTTGATGGCACGAATGCTGCGTGTCTTTGGGCATGAGCAATATCACGAACGAAGCGGGAACGAACGGGCACACAGGTGCCC
TGTTTGAGGGCTTGGCGGTCCCTGCGGACAGTGCGGCTGCTCTGAAGCGCAGTAAGCCCCAAGGGACGCCGCGGGAGCAAAGCGCGATGCGCAACCAAGT
CGAATGGCGGGCCTGCGATCTTGACTCGACGCTGCCGGCCGATCATCAGGCCCGTGCCGTCTGGGCCTTTGTGCAGTCGCTCGATCTTCAAGCCCTGCAC
GGACAGATCCGCGCCGTTGAGGGCAGCGTCGGACGCGCGCCCATTGATCCGGCCATTTTGATGAGCCTGTGGCTGTACGCGACGCTCGACGGTGTGGGCT
CGGCGCGCGAACTGGGTCGGCTGTGCGACAGCGACGACGCCTACCGCTGGCTGTGCGGCGGGGTGGGCGTGAACCACCACACGCTGGGCGACTTCCGGGT
CGAGCTGAACCGGGTGGCCCACGACGGCATGCGCGTGCGTGCCCAGGCGGGTGCGGCCAGCTTTCGGCGTCGCGAGACCTTGGAGCAACTCATGCAAGAC
GCGCAGGCCCAGGTGCAAGCACTCAAGCAGGAGGTGGGCGACGATCCCGGGGCCGGCACCCGCCGCGTGCGTGCGGCGCGTCAACGTGCGGTCGTTGAAC
GCGAACAACGCATTGCGCGCGCCATCGAGGCGATGGCCGAGATCGACAAGAGCCTCTCGGCCAAGGGCAAGAAGGCCCGAGCCAACAGCACGCAGGCCGA
CAGGGCACAAGACGAGCCGGCGCAACCCCAGGCGGCCCCGACCACGCAACCCGTGGGCGAGCAATCCGCCGAGGAACAACCCAACGAGGCCAGGCGCACC
AAGAAACCCAAGGAACCGCGCGTGAGCACCACCGACCACGAGGCGCGTGTGATGAAGATGGCCGATGGGGGCTTTCGCCCGGCGTTCAATGCGCAACTCG
CGGTGGACACCGCCACCCTGATCATCACCGGCGTGGACCTCATCAACTCGGGCAGCGACATGAACCAGATGCTGCCCATGCACGCGCAGCACCAGGACCG
CTATGGTCAAGTGCCCGCGCAGTGGTTGACCGATGGGGGCTTTGCCCAGCACGCGCACATCGAGGAACTCGATGCGCGCGCCACCCAAGCGTTCGCGCCT
GTGGTGGCGCCCAAGGCCCCGCAACGTGATCGCTATGCTGCGCTGCCCGGCGACAGCCAGGCGCTGGGCCAGTGGCGCCAGCGCATGGGCACCGAGGCGG
CCAAGCGAATCTACAAGGAACGTGCTGCCAGCATCGAGTGCGCCAACGCCCGTTTGCGCAACCGCGGCTTGCAGCGCTTGAACGTGCGCGGAATGATCAA
GGCGCGCGCCGTGTTGCTGTGGCATGCGCTGGCCCACAATTTGAAGCGGATGATGGCGCTGAACTTCGCGTTCGCGCCCTGAGAGGCCGGCAAGGGTCGG
CGCGGGCTGCGTTTGCGCTCCACCAGGCCCTGCATCAACGCCAAGCTCGTCCCAACAAACAAACGGCGGCTCGAATCGACTCGTCGCGCCCGTCCGCAGC
GCATGGGCGTCTCGATGCGTTGAGATCATCGCGGAAGTTGAAACGTTCACAGGCAC
TGTTTGAGGGCTTGGCGGTCCCTGCGGACAGTGCGGCTGCTCTGAAGCGCAGTAAGCCCCAAGGGACGCCGCGGGAGCAAAGCGCGATGCGCAACCAAGT
CGAATGGCGGGCCTGCGATCTTGACTCGACGCTGCCGGCCGATCATCAGGCCCGTGCCGTCTGGGCCTTTGTGCAGTCGCTCGATCTTCAAGCCCTGCAC
GGACAGATCCGCGCCGTTGAGGGCAGCGTCGGACGCGCGCCCATTGATCCGGCCATTTTGATGAGCCTGTGGCTGTACGCGACGCTCGACGGTGTGGGCT
CGGCGCGCGAACTGGGTCGGCTGTGCGACAGCGACGACGCCTACCGCTGGCTGTGCGGCGGGGTGGGCGTGAACCACCACACGCTGGGCGACTTCCGGGT
CGAGCTGAACCGGGTGGCCCACGACGGCATGCGCGTGCGTGCCCAGGCGGGTGCGGCCAGCTTTCGGCGTCGCGAGACCTTGGAGCAACTCATGCAAGAC
GCGCAGGCCCAGGTGCAAGCACTCAAGCAGGAGGTGGGCGACGATCCCGGGGCCGGCACCCGCCGCGTGCGTGCGGCGCGTCAACGTGCGGTCGTTGAAC
GCGAACAACGCATTGCGCGCGCCATCGAGGCGATGGCCGAGATCGACAAGAGCCTCTCGGCCAAGGGCAAGAAGGCCCGAGCCAACAGCACGCAGGCCGA
CAGGGCACAAGACGAGCCGGCGCAACCCCAGGCGGCCCCGACCACGCAACCCGTGGGCGAGCAATCCGCCGAGGAACAACCCAACGAGGCCAGGCGCACC
AAGAAACCCAAGGAACCGCGCGTGAGCACCACCGACCACGAGGCGCGTGTGATGAAGATGGCCGATGGGGGCTTTCGCCCGGCGTTCAATGCGCAACTCG
CGGTGGACACCGCCACCCTGATCATCACCGGCGTGGACCTCATCAACTCGGGCAGCGACATGAACCAGATGCTGCCCATGCACGCGCAGCACCAGGACCG
CTATGGTCAAGTGCCCGCGCAGTGGTTGACCGATGGGGGCTTTGCCCAGCACGCGCACATCGAGGAACTCGATGCGCGCGCCACCCAAGCGTTCGCGCCT
GTGGTGGCGCCCAAGGCCCCGCAACGTGATCGCTATGCTGCGCTGCCCGGCGACAGCCAGGCGCTGGGCCAGTGGCGCCAGCGCATGGGCACCGAGGCGG
CCAAGCGAATCTACAAGGAACGTGCTGCCAGCATCGAGTGCGCCAACGCCCGTTTGCGCAACCGCGGCTTGCAGCGCTTGAACGTGCGCGGAATGATCAA
GGCGCGCGCCGTGTTGCTGTGGCATGCGCTGGCCCACAATTTGAAGCGGATGATGGCGCTGAACTTCGCGTTCGCGCCCTGAGAGGCCGGCAAGGGTCGG
CGCGGGCTGCGTTTGCGCTCCACCAGGCCCTGCATCAACGCCAAGCTCGTCCCAACAAACAAACGGCGGCTCGAATCGACTCGTCGCGCCCGTCCGCAGC
GCATGGGCGTCTCGATGCGTTGAGATCATCGCGGAAGTTGAAACGTTCACAGGCAC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1383 bp | 460 aa | 100 | 1482 | + | No |
Chemistry : DDE
ORF sequence :
MFEGLAVPADSAAALKRSKPQGTPREQSAMRNQVEWRACDLDSTLPADHQARAVWAFVQSLDLQALHGQIRAVEGSVGRAPIDPAILMSLWLYATLDGVG
SARELGRLCDSDDAYRWLCGGVGVNHHTLGDFRVELNRVAHDGMRVRAQAGAASFRRRETLEQLMQDAQAQVQALKQEVGDDPGAGTRRVRAARQRAVVE
REQRIARAIEAMAEIDKSLSAKGKKARANSTQADRAQDEPAQPQAAPTTQPVGEQSAEEQPNEARRTKKPKEPRVSTTDHEARVMKMADGGFRPAFNAQL
AVDTATLIITGVDLINSGSDMNQMLPMHAQHQDRYGQVPAQWLTDGGFAQHAHIEELDARATQAFAPVVAPKAPQRDRYAALPGDSQALGQWRQRMGTEA
AKRIYKERAASIECANARLRNRGLQRLNVRGMIKARAVLLWHALAHNLKRMMALNFAFAP
SARELGRLCDSDDAYRWLCGGVGVNHHTLGDFRVELNRVAHDGMRVRAQAGAASFRRRETLEQLMQDAQAQVQALKQEVGDDPGAGTRRVRAARQRAVVE
REQRIARAIEAMAEIDKSLSAKGKKARANSTQADRAQDEPAQPQAAPTTQPVGEQSAEEQPNEARRTKKPKEPRVSTTDHEARVMKMADGGFRPAFNAQL
AVDTATLIITGVDLINSGSDMNQMLPMHAQHQDRYGQVPAQWLTDGGFAQHAHIEELDARATQAFAPVVAPKAPQRDRYAALPGDSQALGQWRQRMGTEA
AKRIYKERAASIECANARLRNRGLQRLNVRGMIKARAVLLWHALAHNLKRMMALNFAFAP
Blast result :
Comments
ISTars1 is 94% aa similar to ISThsp22.
References
1] ISfinder annotation (2016)
2] Genoscope - CEA - Centre National de Sequencage - FRANCE. Direct submission GenBank.
2] Genoscope - CEA - Centre National de Sequencage - FRANCE. Direct submission GenBank.