ISLad2

  • Family ISNCY
  • Group IS1202
MGE type ISRelated element(s) :
Isoform Synonym(s) ISCfr7
Accession numberTranspositionOriginHost
ND Leclercia adecarboxylata
Citrobacter freundii
Leclercia adecarboxylata
DNA section
IS Length : 1647 bp

Ends


IR Length : 0

IRL : TAACGCTGATCTTACATAATCCTGATTATGCGCACTTAAGTTGTTAGAAC
IRR : GAACTCCTGAGCCGCAACCAGATCTAGATGTAATTGCTCAGAGCTGACAG

Insertion site


Left flankDirect repeatRight flankDR Length
tttcaaataaatcgactactatgttcgatgcctgggaaaa0

DNA sequence

TAACGCTGATCTTACATAATCCTGATTATGCGCACTTAAGTTGTTAGAACCATTTAGTAATGTCACTTTTTATCCAGATAGAAACGTCACCTTAGAGTAA
GCTAAACTGAATGCAATTCTAAGGGGCTCAACGCATGTTGGTGACCATGTCAGATAAAGAGATCCACCGCCTACCGGTGATACAGGCAGTTTGTGAAAAG
CGTCTACGCCGTCGTGATGCAGCATCACAGCTTGGCATTTCAGAACGTCAGGCGCAACGACTTATCAATCGTTACCGAGTTTCTGGTGCTGAAGGACTTG
TCAGCCGCAAACGCGGCCAGCCCAGCAACCGCCGGTTGACCGAATCTCTCAAACTACGAGTACTCACGCTGATACGTGAAAACTACAGTGACTTTGGGCC
CACACTGGCCGCAGAAAAACTCAGAGAGCGCCATAATATCCGGCTTTCAATCGAGACCGTCCGCAACTGGATGACGTCTGACGGACTCTGGGTCCCGCAT
GCTCGCCGTAAGTCACGGGTTTATCAACCCCGACATCGGCGTGATTGTCTGGGTGAACTTATCCAGATCGACGGCTCCCACCATGACTGGTTTGAAGGCC
GTGCGCCAAAATGCTGCCTGCTGGTCTTTATCGATGATGCCACCGGGCGTCTGATGCATTTGCGGTTCAGCGAGTCAGAAACAGCCTTTGACTACATGCT
GGCAACCCGGGAATACATCGAGCAGCATGGGAAGCCGGTATCGCTGTACAGTGACAAACACGCAATATTTCGCGTCAGTGGTCCGGAGAAACGCAATACC
ACCGTTACCCAGTTCGGACGTGTGCTTTATGACCTGGCAATCGAGCTTATTTGTGCCAACAGCTCTGAAGCTAAAGGCCGCGTGGAACGTGCGAATCAGA
CACTTCAGGATCGGCTGATCAAAGAAATGCGTCTGGAAGGTATAACCGGCATTGAGGCCGCAAATGCCTGGCTTGCCACTTTCATCGCTGACTTTAACAG
CCGGTTTTCACGACCGGCTAAGTTCCCCAAAGATTTGCATCGTCCGGTGCAGGAAAGCCCCGATGAATTAAGAGACATCTTTGCCTGGCATGATGTTCGT
ACCGTGTCGAAATCACTGACCTTCCAGTACGATAAGATCCTTTATCTCATGGACACCACAGAAGAAAATAGCCGTCTTGCCGGTGAAAAAATTAAAGTAC
TGGATTATCCCGATGGCACCCTCGCCTTCCTCTATGGGCACCGGAGCCTTAAGTGCCAGGCATTTGATAAGCTGGCCTGTGTCGACCAGGGGCAGATTGT
TGATAACAAACGTCTCGGGACTGTACTCCGACTGGCTCAGGTAAAACAGGATGAGCGGGAAAGCGAAGGCAAACGGGAACGAAGCAAAAAATCGCCCAGC
CGTAAGGCTCAGGTGCGCATCCAGGAACAGCTCCGGGCTATCAATCCCGTTCTGGCAGACCCGAGCTTGTTTGTGGCAAGTTCAAAGCGATAGAATCGAC
CATCAGTGCTGCAAAGTACCGGAACAGTGAGTCCCCAAAAGGATACTTGAGATGATTAAATTCCCGACTACAAAGCGCGTTGATTTGTATAAAACTGCTG
TCAGCTCTGAGCAATTACATCTAGATCTGGTTGCGGCTCAGGAGTTC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1347 bp448 aa1471493+No
ORF function : Transposase
Description :

ORF sequence :

MSDKEIHRLPVIQAVCEKRLRRRDAASQLGISERQAQRLINRYRVSGAEGLVSRKRGQPSNRRLTESLKLRVLTLIRENYSDFGPTLAAEKLRERHNIRL
SIETVRNWMTSDGLWVPHARRKSRVYQPRHRRDCLGELIQIDGSHHDWFEGRAPKCCLLVFIDDATGRLMHLRFSESETAFDYMLATREYIEQHGKPVSL
YSDKHAIFRVSGPEKRNTTVTQFGRVLYDLAIELICANSSEAKGRVERANQTLQDRLIKEMRLEGITGIEAANAWLATFIADFNSRFSRPAKFPKDLHRP
VQESPDELRDIFAWHDVRTVSKSLTFQYDKILYLMDTTEENSRLAGEKIKVLDYPDGTLAFLYGHRSLKCQAFDKLACVDQGQIVDNKRLGTVLRLAQVK
QDERESEGKRERSKKSPSRKAQVRIQEQLRAINPVLADPSLFVASSKR

 

Blast result :
Comments
ISLad2 is 74% aa similar to ISAjo2
References
[1] Zhou D. (2016) Direct submission