ISLad2
- Family ISNCY
- Group IS1202
Isoform Synonym(s) ISCfr7
Accession number | Transposition | Origin | Host |
---|---|---|---|
ND | Leclercia adecarboxylata | Citrobacter freundii Leclercia adecarboxylata |
DNA section
IS Length : 1647 bp
Ends
IR Length : 0
IRL : TAACGCTGATCTTACATAATCCTGATTATGCGCACTTAAGTTGTTAGAAC
IRR : GAACTCCTGAGCCGCAACCAGATCTAGATGTAATTGCTCAGAGCTGACAG
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
tttcaaataaatcgactact | atgttcgatgcctgggaaaa | 0 |
DNA sequence
TAACGCTGATCTTACATAATCCTGATTATGCGCACTTAAGTTGTTAGAACCATTTAGTAATGTCACTTTTTATCCAGATAGAAACGTCACCTTAGAGTAA
GCTAAACTGAATGCAATTCTAAGGGGCTCAACGCATGTTGGTGACCATGTCAGATAAAGAGATCCACCGCCTACCGGTGATACAGGCAGTTTGTGAAAAG
CGTCTACGCCGTCGTGATGCAGCATCACAGCTTGGCATTTCAGAACGTCAGGCGCAACGACTTATCAATCGTTACCGAGTTTCTGGTGCTGAAGGACTTG
TCAGCCGCAAACGCGGCCAGCCCAGCAACCGCCGGTTGACCGAATCTCTCAAACTACGAGTACTCACGCTGATACGTGAAAACTACAGTGACTTTGGGCC
CACACTGGCCGCAGAAAAACTCAGAGAGCGCCATAATATCCGGCTTTCAATCGAGACCGTCCGCAACTGGATGACGTCTGACGGACTCTGGGTCCCGCAT
GCTCGCCGTAAGTCACGGGTTTATCAACCCCGACATCGGCGTGATTGTCTGGGTGAACTTATCCAGATCGACGGCTCCCACCATGACTGGTTTGAAGGCC
GTGCGCCAAAATGCTGCCTGCTGGTCTTTATCGATGATGCCACCGGGCGTCTGATGCATTTGCGGTTCAGCGAGTCAGAAACAGCCTTTGACTACATGCT
GGCAACCCGGGAATACATCGAGCAGCATGGGAAGCCGGTATCGCTGTACAGTGACAAACACGCAATATTTCGCGTCAGTGGTCCGGAGAAACGCAATACC
ACCGTTACCCAGTTCGGACGTGTGCTTTATGACCTGGCAATCGAGCTTATTTGTGCCAACAGCTCTGAAGCTAAAGGCCGCGTGGAACGTGCGAATCAGA
CACTTCAGGATCGGCTGATCAAAGAAATGCGTCTGGAAGGTATAACCGGCATTGAGGCCGCAAATGCCTGGCTTGCCACTTTCATCGCTGACTTTAACAG
CCGGTTTTCACGACCGGCTAAGTTCCCCAAAGATTTGCATCGTCCGGTGCAGGAAAGCCCCGATGAATTAAGAGACATCTTTGCCTGGCATGATGTTCGT
ACCGTGTCGAAATCACTGACCTTCCAGTACGATAAGATCCTTTATCTCATGGACACCACAGAAGAAAATAGCCGTCTTGCCGGTGAAAAAATTAAAGTAC
TGGATTATCCCGATGGCACCCTCGCCTTCCTCTATGGGCACCGGAGCCTTAAGTGCCAGGCATTTGATAAGCTGGCCTGTGTCGACCAGGGGCAGATTGT
TGATAACAAACGTCTCGGGACTGTACTCCGACTGGCTCAGGTAAAACAGGATGAGCGGGAAAGCGAAGGCAAACGGGAACGAAGCAAAAAATCGCCCAGC
CGTAAGGCTCAGGTGCGCATCCAGGAACAGCTCCGGGCTATCAATCCCGTTCTGGCAGACCCGAGCTTGTTTGTGGCAAGTTCAAAGCGATAGAATCGAC
CATCAGTGCTGCAAAGTACCGGAACAGTGAGTCCCCAAAAGGATACTTGAGATGATTAAATTCCCGACTACAAAGCGCGTTGATTTGTATAAAACTGCTG
TCAGCTCTGAGCAATTACATCTAGATCTGGTTGCGGCTCAGGAGTTC
GCTAAACTGAATGCAATTCTAAGGGGCTCAACGCATGTTGGTGACCATGTCAGATAAAGAGATCCACCGCCTACCGGTGATACAGGCAGTTTGTGAAAAG
CGTCTACGCCGTCGTGATGCAGCATCACAGCTTGGCATTTCAGAACGTCAGGCGCAACGACTTATCAATCGTTACCGAGTTTCTGGTGCTGAAGGACTTG
TCAGCCGCAAACGCGGCCAGCCCAGCAACCGCCGGTTGACCGAATCTCTCAAACTACGAGTACTCACGCTGATACGTGAAAACTACAGTGACTTTGGGCC
CACACTGGCCGCAGAAAAACTCAGAGAGCGCCATAATATCCGGCTTTCAATCGAGACCGTCCGCAACTGGATGACGTCTGACGGACTCTGGGTCCCGCAT
GCTCGCCGTAAGTCACGGGTTTATCAACCCCGACATCGGCGTGATTGTCTGGGTGAACTTATCCAGATCGACGGCTCCCACCATGACTGGTTTGAAGGCC
GTGCGCCAAAATGCTGCCTGCTGGTCTTTATCGATGATGCCACCGGGCGTCTGATGCATTTGCGGTTCAGCGAGTCAGAAACAGCCTTTGACTACATGCT
GGCAACCCGGGAATACATCGAGCAGCATGGGAAGCCGGTATCGCTGTACAGTGACAAACACGCAATATTTCGCGTCAGTGGTCCGGAGAAACGCAATACC
ACCGTTACCCAGTTCGGACGTGTGCTTTATGACCTGGCAATCGAGCTTATTTGTGCCAACAGCTCTGAAGCTAAAGGCCGCGTGGAACGTGCGAATCAGA
CACTTCAGGATCGGCTGATCAAAGAAATGCGTCTGGAAGGTATAACCGGCATTGAGGCCGCAAATGCCTGGCTTGCCACTTTCATCGCTGACTTTAACAG
CCGGTTTTCACGACCGGCTAAGTTCCCCAAAGATTTGCATCGTCCGGTGCAGGAAAGCCCCGATGAATTAAGAGACATCTTTGCCTGGCATGATGTTCGT
ACCGTGTCGAAATCACTGACCTTCCAGTACGATAAGATCCTTTATCTCATGGACACCACAGAAGAAAATAGCCGTCTTGCCGGTGAAAAAATTAAAGTAC
TGGATTATCCCGATGGCACCCTCGCCTTCCTCTATGGGCACCGGAGCCTTAAGTGCCAGGCATTTGATAAGCTGGCCTGTGTCGACCAGGGGCAGATTGT
TGATAACAAACGTCTCGGGACTGTACTCCGACTGGCTCAGGTAAAACAGGATGAGCGGGAAAGCGAAGGCAAACGGGAACGAAGCAAAAAATCGCCCAGC
CGTAAGGCTCAGGTGCGCATCCAGGAACAGCTCCGGGCTATCAATCCCGTTCTGGCAGACCCGAGCTTGTTTGTGGCAAGTTCAAAGCGATAGAATCGAC
CATCAGTGCTGCAAAGTACCGGAACAGTGAGTCCCCAAAAGGATACTTGAGATGATTAAATTCCCGACTACAAAGCGCGTTGATTTGTATAAAACTGCTG
TCAGCTCTGAGCAATTACATCTAGATCTGGTTGCGGCTCAGGAGTTC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1347 bp | 448 aa | 147 | 1493 | + | No |
Description :
ORF sequence :
MSDKEIHRLPVIQAVCEKRLRRRDAASQLGISERQAQRLINRYRVSGAEGLVSRKRGQPSNRRLTESLKLRVLTLIRENYSDFGPTLAAEKLRERHNIRL
SIETVRNWMTSDGLWVPHARRKSRVYQPRHRRDCLGELIQIDGSHHDWFEGRAPKCCLLVFIDDATGRLMHLRFSESETAFDYMLATREYIEQHGKPVSL
YSDKHAIFRVSGPEKRNTTVTQFGRVLYDLAIELICANSSEAKGRVERANQTLQDRLIKEMRLEGITGIEAANAWLATFIADFNSRFSRPAKFPKDLHRP
VQESPDELRDIFAWHDVRTVSKSLTFQYDKILYLMDTTEENSRLAGEKIKVLDYPDGTLAFLYGHRSLKCQAFDKLACVDQGQIVDNKRLGTVLRLAQVK
QDERESEGKRERSKKSPSRKAQVRIQEQLRAINPVLADPSLFVASSKR
SIETVRNWMTSDGLWVPHARRKSRVYQPRHRRDCLGELIQIDGSHHDWFEGRAPKCCLLVFIDDATGRLMHLRFSESETAFDYMLATREYIEQHGKPVSL
YSDKHAIFRVSGPEKRNTTVTQFGRVLYDLAIELICANSSEAKGRVERANQTLQDRLIKEMRLEGITGIEAANAWLATFIADFNSRFSRPAKFPKDLHRP
VQESPDELRDIFAWHDVRTVSKSLTFQYDKILYLMDTTEENSRLAGEKIKVLDYPDGTLAFLYGHRSLKCQAFDKLACVDQGQIVDNKRLGTVLRLAQVK
QDERESEGKRERSKKSPSRKAQVRIQEQLRAINPVLADPSLFVASSKR
Blast result :
Comments
ISLad2 is 74% aa similar to ISAjo2
References
[1] Zhou D. (2016) Direct submission