ISLesp5
- Family IS5
- Group IS903
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
AWNH01000081 | ND | Leptolyngbya sp. | Leptolyngbya sp. Heron Island J |
DNA section
IS Length : 1066 bp
Ends
IR Length : 16
IRL : GGCTTTGGTGCGTGAAAAAGGGCGTTGCAGAGTCATAGGAGCCGGTAACG
IRR : GGCTTTGGTGCGTGAATATTGCGGCAGACAGATCGGACCTGTGGGATATC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
AGTACTTTTA | GCACACTAT | GCAATAATTC | 9 |
DNA sequence
GGCTTTGGTGCGTGAAAAAGGGCGTTGCAGAGTCATAGGAGCCGGTAACGTGTAGTTACCACACAAACACGGTCCCGATGAAACGCTCTTACAAACTCCG
CAACTGGTCTGAGTATACCGCCGCCTTGGTGAAGCGAGGAAGCCTGACACTATGGCTTAGTGAGGAGGTGATTGAAACGTGGGAAAACACTCAAAAGACA
GGCAACCCTGGAGCCTCTAAGACCTATAGTGACTTAGCCATTCAGACATTACTCACCTTGCGAGTGATCTATGGACTAGCCTTGCGTCAAACCATCGGCT
TTGCAGGGTCTATTTTTGAACTGATGGGGGTATCGGTGGCCTTACCAGTGCATACAACGCTATCTCGTCGTCAAAAGACTTTAATCATTGATTTGCCGAC
GAAACCCGCCACCGGGGGACGTCATGTGGTGGTCGACAGTACCGGCATTAAAGTCTACGGAGAAGGTGAATGGAAAACGCGGCAGCATGGGGTAAGCAAA
CGGCGCACATGGCTCAAACTACATCTGGGTGTCGATGAGCAAACAGGCGAGATCCTAGCGGCAGTCGTGACCTCAAACGCGATTAGCGATGGAGAGATAT
TGCCCGCCCTCCTCGACCAAATTCCAGACGAGATTGACCAAGTCAGTGCCGATGGTGCATACGACCGCACCTATTGCTACGATGCCATTGATGAGCGGGA
AGCCACTGCCGCAATTCCACCTCGCAAAGATGCCAAAATTTGGTTTCATGGCAACCGTAAACAAGAGCCTCATCCACGAGATGAAAACTTAAGAGCGATT
CGCAAACAGGGGCGTTCTAACTGGAAAGAAGAGATTAACTATCATCGACGCTCTCTGAGTGAAACGGCCATGTATCGAGTCAAAACCATTTTCACAGGTG
AGGTATCTGCACGGTGTTTTGAAAATCAAACGACAGAATTAATGTTGGAATGTTCTATTATCAATAAGTTCAGTCACTTAGGAATGCCTGATAGCTACCT
TGTTGAAGGCTAAGTCGATATCCCACAGGTCCGATCTGTCTGCCGCAATATTCACGCACCAAAGCC
CAACTGGTCTGAGTATACCGCCGCCTTGGTGAAGCGAGGAAGCCTGACACTATGGCTTAGTGAGGAGGTGATTGAAACGTGGGAAAACACTCAAAAGACA
GGCAACCCTGGAGCCTCTAAGACCTATAGTGACTTAGCCATTCAGACATTACTCACCTTGCGAGTGATCTATGGACTAGCCTTGCGTCAAACCATCGGCT
TTGCAGGGTCTATTTTTGAACTGATGGGGGTATCGGTGGCCTTACCAGTGCATACAACGCTATCTCGTCGTCAAAAGACTTTAATCATTGATTTGCCGAC
GAAACCCGCCACCGGGGGACGTCATGTGGTGGTCGACAGTACCGGCATTAAAGTCTACGGAGAAGGTGAATGGAAAACGCGGCAGCATGGGGTAAGCAAA
CGGCGCACATGGCTCAAACTACATCTGGGTGTCGATGAGCAAACAGGCGAGATCCTAGCGGCAGTCGTGACCTCAAACGCGATTAGCGATGGAGAGATAT
TGCCCGCCCTCCTCGACCAAATTCCAGACGAGATTGACCAAGTCAGTGCCGATGGTGCATACGACCGCACCTATTGCTACGATGCCATTGATGAGCGGGA
AGCCACTGCCGCAATTCCACCTCGCAAAGATGCCAAAATTTGGTTTCATGGCAACCGTAAACAAGAGCCTCATCCACGAGATGAAAACTTAAGAGCGATT
CGCAAACAGGGGCGTTCTAACTGGAAAGAAGAGATTAACTATCATCGACGCTCTCTGAGTGAAACGGCCATGTATCGAGTCAAAACCATTTTCACAGGTG
AGGTATCTGCACGGTGTTTTGAAAATCAAACGACAGAATTAATGTTGGAATGTTCTATTATCAATAAGTTCAGTCACTTAGGAATGCCTGATAGCTACCT
TGTTGAAGGCTAAGTCGATATCCCACAGGTCCGATCTGTCTGCCGCAATATTCACGCACCAAAGCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
936 bp | 311 aa | 78 | 1013 | + | No |
Chemistry : DDE
ORF sequence :
MKRSYKLRNWSEYTAALVKRGSLTLWLSEEVIETWENTQKTGNPGASKTYSDLAIQTLLTLRVIYGLALRQTIGFAGSIFELMGVSVALPVHTTLSRRQK
TLIIDLPTKPATGGRHVVVDSTGIKVYGEGEWKTRQHGVSKRRTWLKLHLGVDEQTGEILAAVVTSNAISDGEILPALLDQIPDEIDQVSADGAYDRTYC
YDAIDEREATAAIPPRKDAKIWFHGNRKQEPHPRDENLRAIRKQGRSNWKEEINYHRRSLSETAMYRVKTIFTGEVSARCFENQTTELMLECSIINKFSH
LGMPDSYLVEG
TLIIDLPTKPATGGRHVVVDSTGIKVYGEGEWKTRQHGVSKRRTWLKLHLGVDEQTGEILAAVVTSNAISDGEILPALLDQIPDEIDQVSADGAYDRTYC
YDAIDEREATAAIPPRKDAKIWFHGNRKQEPHPRDENLRAIRKQGRSNWKEEINYHRRSLSETAMYRVKTIFTGEVSARCFENQTTELMLECSIINKFSH
LGMPDSYLVEG
Blast result :
Comments
ISLesp5 is 75% aa similar to ISAcma6.
References
1] ISfinder annotation (2016)
2] Paul,R., Jinkerson,R.E., Buss,K., Steel,J., Mohr,R., Hess,W.R., Chen,M. and Fromme,P. (2013) Direct submission GenBank.
2] Paul,R., Jinkerson,R.E., Buss,K., Steel,J., Mohr,R., Hess,W.R., Chen,M. and Fromme,P. (2013) Direct submission GenBank.