ISMomu1

  • Family ISNCY
  • Group ISDol1
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
LTBC01000002 ND Moorella mulderi
Moorella mulderi DSM 14980
DNA section
IS Length : 1661 bp

Ends


IR Length : 16/18

IRL : GTTCCCCCTGAAAAACTCAGGGCAAAAAGCCTTAGCTTTTCAGGAAACCG
IRR : GTTACCCCTGAAAAAGTCCACTTTTTGCATCACATAGGGGAAAATGTTAT

Insertion site


Left flankDirect repeatRight flankDR Length
TGACTTTAAGGGCC TACGTATAAGTA CCACGGTGGTCAA0

DNA sequence

GTTCCCCCTGAAAAACTCAGGGCAAAAAGCCTTAGCTTTTCAGGAAACCGGATAATTATTTAACAAAGCAGAAGGAGTTACCATCCTCTGGATCGAATCT
TGTAAGTACGAGAAAACAAGAAAACCCAGAAGGAGGAACTCCTATGAATAACATTCGCCACACCACCTCCTTTTCCTGCCGGGTGATCTCATGTTAAGGC
TAAAAGATCCGCAACTCACCCTGTGGGATGCCCTGTTGCCAGCTGAGGTGATAGAACTAAACCCAGAACTGGCCAGGGTGGATGAACTACTAGATGACGA
TAGGTTTATGGCTCCATTCATCAGCCGGTTTGAGGCGCGCCTGGGCAGGCCAACTATCCCTATAGAAACCTACCTGCGCATGATGTACTTGAAGCACCGC
TACGGCCTGGGTTATGAAGTTTTAGTCCAGGAGGTAAATGACAGTATTAAGTGGCGGCGTTTCTGCCGTATTCCCTTAACCCAAAAGGTGCCCCATGCTA
CTACTTTGATTAAACTCACCAAACGTTGTGGCCCCGGGGTTGTAGAAGAACTCAATAAAGCCCTGGTTCAGGAAGCCCGGGAGAAAAAGATTATCCGGGG
ACGCAAGCTGCAGGTGGACACCACGGTAGTCGAAGCTAACATTCACCATCCTACGGACGCAAGCCTTTTAGCCGATGGAGTACGGGTTATCACCCGTACC
GTGAAAAAGATTCAGGAAGCAGGTCTAGCCATAGCGGGGACCTTTCATAACCGGCAACGCTCCATTAAAAAACGCATCTATGAGATCAATAAAGTGTTGA
AACGCCGCAGTAACGAAGCCTATCAAGAAGTCCGGGAAATTACAGGTGCAATTCTTAAAACCACCCGGAAGGTTATTGCCGAAGCTACCAGTATAGTCAG
GGAGGCCAAGGACACCCTCCAGCAGCAAGGGGATCAAGTTAAAGGGAAAACCCGTGCCCTGGTCCAGACGTTAGAAGAAACTATCAGCCGCACGGAAAAG
ATTGTAACCCAAACGGCAGCCGTCCAGGAGGGGAATTTGCATCTTCCCGACCGGCTGGTGAGTATCTTTGACCCTGACGCCCTGCCCATTAAAAGGGGTA
AAGCCAATGCCCCGGTAGAGTTCGGCTATAAGGTGCTGCTACAAGAAGCGGAACACAAGATCATCACCGGCTATAAGGTGTTGCGGGGGAACCCCGCGGA
TGACACCTTACTCCTTGGCGCAGTTGAGGATCATACTGAGACTTTCAAACATCCACCCCGTGCCCTTGCTGCCGATAGAGGTTTTGGCGGTTCAAAGAAT
GAAACAAGTTGTCATCAATTTGGGGTAAAGCAGGTCAGCTTACCCCCGAAAGGCAAAATCAGCAAAGCTCGCAAAGCCTATCAATCCCAAAGCTGGTTCA
AACGCCTCCAACGCTGGCGCGCTGGAGGGGAGGCTACTATTAGTCTTTTGAAGCGCAAATATGGATTACGCCGTAGCCTTTCCAGGGGATATGAGGGTAC
CACCACCTGGGTCGGTTATGGAATTTTGGCCTATAATTTACACCGGTTGGCAACAATGGTATAACATAATGGATGAAACAGTTAGAATTCTACTCGAACT
ACAATCCGGAAATAACATTTTCCCCTATGTGATGCAAAAAGTGGACTTTTTCAGGGGTAAC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1374 bp457 aa1911564+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MLRLKDPQLTLWDALLPAEVIELNPELARVDELLDDDRFMAPFISRFEARLGRPTIPIETYLRMMYLKHRYGLGYEVLVQEVNDSIKWRRFCRIPLTQKV
PHATTLIKLTKRCGPGVVEELNKALVQEAREKKIIRGRKLQVDTTVVEANIHHPTDASLLADGVRVITRTVKKIQEAGLAIAGTFHNRQRSIKKRIYEIN
KVLKRRSNEAYQEVREITGAILKTTRKVIAEATSIVREAKDTLQQQGDQVKGKTRALVQTLEETISRTEKIVTQTAAVQEGNLHLPDRLVSIFDPDALPI
KRGKANAPVEFGYKVLLQEAEHKIITGYKVLRGNPADDTLLLGAVEDHTETFKHPPRALAADRGFGGSKNETSCHQFGVKQVSLPPKGKISKARKAYQSQ
SWFKRLQRWRAGGEATISLLKRKYGLRRSLSRGYEGTTTWVGYGILAYNLHRLATMV

 

Blast result :
Comments
ISMomu1 is 71% aa similar to ISDsac1.
References
1] ISfinder annotation (2016)
2] Poehlein,A. and Daniel,R. (2016) Direct submission GenBank.