ISVa7

  • Family ISL3
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
ND Vibrio anguillarum
Vibrio anguillarum JLL237 (O1)
DNA section
IS Length : 1348 bp

Ends


IR Length : 22

IRL : GGCTCTTCTCCGCTTAGATGAGTCTATAAATTAACAATATAATCAGTAAT
IRR : GGCTCTTCTCCGCTTAGATGAGCTTGATTTCTGGGTAAATGGTAGAGTGA

Insertion site


Left flankDirect repeatRight flankDR Length

DNA sequence

GGCTCTTCTCCGCTTAGATGAGTCTATAAATTAACAATATAATCAGTAATGCATTGATTTATAATCACTTACCGTCTTATATCTCAGTGTTGTAGTTTGT
CGTTATTATCTTCCGCTCTATTTAACTTTAAAGGCCAATCCGTACAGTCTGTAACGCTCGAAGAAAGCTCTCATTCAGTACTCGTCAAATGCAAGCGAGA
TAGACGCTGTAAAGTTGTTGACCCTGAGACTGGAGCACCGCGCACAGTCGACCACTATGTTCACCGTCGCCTGTCGGATTTACCTGTCAGTGGTCGCCCT
TGCGTTATAGAAATTGAATTGGCTCAGACAAGAGATAGGCTCGGCCGAAGGTTGATTGAAGCGACTGATTTTGTTGATAAGGGGAGTCGTTATACCAAGA
GATTCTGTCACTTTATTAGTGGACTATGTCGCTATATGAGCATCCACGCAGTGTCTAAGCATTTAGACATACGCTGGGAAACCGTGAAAAATATCGATAA
AGCATTTCTGTTATCTACCTTGCCCGCTTTAGAGCCTAAGAAGTTGACCAACCTTGTTCATATTGGCGTTGATGAAGTCGCCAGGGCTAAAGGCCATGAC
TATATGACCGTCGTTTATGATCTAGTTTCAGGACAACTTATTTGGGTTGACCATGGGCGAACTTCAAACGTACTCATCAACTTTTTTGAACAATTATCAC
CGCAAACGAGAGACGGCATCCAAGCGGTATCAATGGATATGGGGCAATCTTACCAATCAGCAGTGAGAAACGCTCTTCCGAAGGCAGACATCGTTTTTGA
CCGGTTTCATGTTATGCAGAATTACTCTCTTCTGATAAGGAAAGAGCGTAATAAAGCGTTTAGGAAAGGAACACATGACGAGAAGAAAATGCTTAAGGGG
ACGCTATTTTTACTCCTCAAAAATGCGCCGAAATTAAGCGATAATCAGTCAGATAGGCTAGATGATTTACTTGAAAGCAATAAGACTCTTTGTACGATTT
ATATGCTCAAAGAGCAGCTTCAAGCCTTATGGGATGAACGTCATTTTGACTTGATGATCGCAGCGCTTGATGCGTGGTGCCAGCTTGCTAAAAAGACGAG
GATCTTGTCTCTCATCAACTTTGCAGACGCGCTTTGGGAGAGAAGAGTTGGGATCTGCAATTATGCAAAATATAAGCTGACGAATGCCCGAGTGGAAGCT
GGGAATGTATCGATAGGCCTTCTTAGACGGAGAGCCCGAGGAGTCAGGGATACTGATTACTTTAAATTGAAGATTAGACAAACCTCAATCCTAGAAACTC
ACTCTACCATTTACCCAGAAATCAAGCTCATCTAAGCGGAGAAGAGCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1239 bp412 aa971335+No
ORF function : Transposase
Chemistry : Unknow

ORF sequence :

LSLLSSALFNFKGQSVQSVTLEESSHSVLVKCKRDRRCKVVDPETGAPRTVDHYVHRRLSDLPVSGRPCVIEIELAQTRDRLGRRLIEATDFVDKGSRYT
KRFCHFISGLCRYMSIHAVSKHLDIRWETVKNIDKAFLLSTLPALEPKKLTNLVHIGVDEVARAKGHDYMTVVYDLVSGQLIWVDHGRTSNVLINFFEQL
SPQTRDGIQAVSMDMGQSYQSAVRNALPKADIVFDRFHVMQNYSLLIRKERNKAFRKGTHDEKKMLKGTLFLLLKNAPKLSDNQSDRLDDLLESNKTLCT
IYMLKEQLQALWDERHFDLMIAALDAWCQLAKKTRILSLINFADALWERRVGICNYAKYKLTNARVEAGNVSIGLLRRRARGVRDTDYFKLKIRQTSILE
THSTIYPEIKLI

 

Blast result :
Comments
ISVa7 is 86% aa similar to ISShha2.
References
1] K. Olav Holm (2016) Direct submission
2] Bay L, Larsen JL, Leisner JJ. (2007) Syst Appl Microbiol. Mar;30(2):85-92