ISVa7
- Family ISL3
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
ND | Vibrio anguillarum | Vibrio anguillarum JLL237 (O1) |
DNA section
IS Length : 1348 bp
Ends
IR Length : 22
IRL : GGCTCTTCTCCGCTTAGATGAGTCTATAAATTAACAATATAATCAGTAAT
IRR : GGCTCTTCTCCGCTTAGATGAGCTTGATTTCTGGGTAAATGGTAGAGTGA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|
DNA sequence
GGCTCTTCTCCGCTTAGATGAGTCTATAAATTAACAATATAATCAGTAATGCATTGATTTATAATCACTTACCGTCTTATATCTCAGTGTTGTAGTTTGT
CGTTATTATCTTCCGCTCTATTTAACTTTAAAGGCCAATCCGTACAGTCTGTAACGCTCGAAGAAAGCTCTCATTCAGTACTCGTCAAATGCAAGCGAGA
TAGACGCTGTAAAGTTGTTGACCCTGAGACTGGAGCACCGCGCACAGTCGACCACTATGTTCACCGTCGCCTGTCGGATTTACCTGTCAGTGGTCGCCCT
TGCGTTATAGAAATTGAATTGGCTCAGACAAGAGATAGGCTCGGCCGAAGGTTGATTGAAGCGACTGATTTTGTTGATAAGGGGAGTCGTTATACCAAGA
GATTCTGTCACTTTATTAGTGGACTATGTCGCTATATGAGCATCCACGCAGTGTCTAAGCATTTAGACATACGCTGGGAAACCGTGAAAAATATCGATAA
AGCATTTCTGTTATCTACCTTGCCCGCTTTAGAGCCTAAGAAGTTGACCAACCTTGTTCATATTGGCGTTGATGAAGTCGCCAGGGCTAAAGGCCATGAC
TATATGACCGTCGTTTATGATCTAGTTTCAGGACAACTTATTTGGGTTGACCATGGGCGAACTTCAAACGTACTCATCAACTTTTTTGAACAATTATCAC
CGCAAACGAGAGACGGCATCCAAGCGGTATCAATGGATATGGGGCAATCTTACCAATCAGCAGTGAGAAACGCTCTTCCGAAGGCAGACATCGTTTTTGA
CCGGTTTCATGTTATGCAGAATTACTCTCTTCTGATAAGGAAAGAGCGTAATAAAGCGTTTAGGAAAGGAACACATGACGAGAAGAAAATGCTTAAGGGG
ACGCTATTTTTACTCCTCAAAAATGCGCCGAAATTAAGCGATAATCAGTCAGATAGGCTAGATGATTTACTTGAAAGCAATAAGACTCTTTGTACGATTT
ATATGCTCAAAGAGCAGCTTCAAGCCTTATGGGATGAACGTCATTTTGACTTGATGATCGCAGCGCTTGATGCGTGGTGCCAGCTTGCTAAAAAGACGAG
GATCTTGTCTCTCATCAACTTTGCAGACGCGCTTTGGGAGAGAAGAGTTGGGATCTGCAATTATGCAAAATATAAGCTGACGAATGCCCGAGTGGAAGCT
GGGAATGTATCGATAGGCCTTCTTAGACGGAGAGCCCGAGGAGTCAGGGATACTGATTACTTTAAATTGAAGATTAGACAAACCTCAATCCTAGAAACTC
ACTCTACCATTTACCCAGAAATCAAGCTCATCTAAGCGGAGAAGAGCC
CGTTATTATCTTCCGCTCTATTTAACTTTAAAGGCCAATCCGTACAGTCTGTAACGCTCGAAGAAAGCTCTCATTCAGTACTCGTCAAATGCAAGCGAGA
TAGACGCTGTAAAGTTGTTGACCCTGAGACTGGAGCACCGCGCACAGTCGACCACTATGTTCACCGTCGCCTGTCGGATTTACCTGTCAGTGGTCGCCCT
TGCGTTATAGAAATTGAATTGGCTCAGACAAGAGATAGGCTCGGCCGAAGGTTGATTGAAGCGACTGATTTTGTTGATAAGGGGAGTCGTTATACCAAGA
GATTCTGTCACTTTATTAGTGGACTATGTCGCTATATGAGCATCCACGCAGTGTCTAAGCATTTAGACATACGCTGGGAAACCGTGAAAAATATCGATAA
AGCATTTCTGTTATCTACCTTGCCCGCTTTAGAGCCTAAGAAGTTGACCAACCTTGTTCATATTGGCGTTGATGAAGTCGCCAGGGCTAAAGGCCATGAC
TATATGACCGTCGTTTATGATCTAGTTTCAGGACAACTTATTTGGGTTGACCATGGGCGAACTTCAAACGTACTCATCAACTTTTTTGAACAATTATCAC
CGCAAACGAGAGACGGCATCCAAGCGGTATCAATGGATATGGGGCAATCTTACCAATCAGCAGTGAGAAACGCTCTTCCGAAGGCAGACATCGTTTTTGA
CCGGTTTCATGTTATGCAGAATTACTCTCTTCTGATAAGGAAAGAGCGTAATAAAGCGTTTAGGAAAGGAACACATGACGAGAAGAAAATGCTTAAGGGG
ACGCTATTTTTACTCCTCAAAAATGCGCCGAAATTAAGCGATAATCAGTCAGATAGGCTAGATGATTTACTTGAAAGCAATAAGACTCTTTGTACGATTT
ATATGCTCAAAGAGCAGCTTCAAGCCTTATGGGATGAACGTCATTTTGACTTGATGATCGCAGCGCTTGATGCGTGGTGCCAGCTTGCTAAAAAGACGAG
GATCTTGTCTCTCATCAACTTTGCAGACGCGCTTTGGGAGAGAAGAGTTGGGATCTGCAATTATGCAAAATATAAGCTGACGAATGCCCGAGTGGAAGCT
GGGAATGTATCGATAGGCCTTCTTAGACGGAGAGCCCGAGGAGTCAGGGATACTGATTACTTTAAATTGAAGATTAGACAAACCTCAATCCTAGAAACTC
ACTCTACCATTTACCCAGAAATCAAGCTCATCTAAGCGGAGAAGAGCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1239 bp | 412 aa | 97 | 1335 | + | No |
Chemistry : Unknow
ORF sequence :
LSLLSSALFNFKGQSVQSVTLEESSHSVLVKCKRDRRCKVVDPETGAPRTVDHYVHRRLSDLPVSGRPCVIEIELAQTRDRLGRRLIEATDFVDKGSRYT
KRFCHFISGLCRYMSIHAVSKHLDIRWETVKNIDKAFLLSTLPALEPKKLTNLVHIGVDEVARAKGHDYMTVVYDLVSGQLIWVDHGRTSNVLINFFEQL
SPQTRDGIQAVSMDMGQSYQSAVRNALPKADIVFDRFHVMQNYSLLIRKERNKAFRKGTHDEKKMLKGTLFLLLKNAPKLSDNQSDRLDDLLESNKTLCT
IYMLKEQLQALWDERHFDLMIAALDAWCQLAKKTRILSLINFADALWERRVGICNYAKYKLTNARVEAGNVSIGLLRRRARGVRDTDYFKLKIRQTSILE
THSTIYPEIKLI
KRFCHFISGLCRYMSIHAVSKHLDIRWETVKNIDKAFLLSTLPALEPKKLTNLVHIGVDEVARAKGHDYMTVVYDLVSGQLIWVDHGRTSNVLINFFEQL
SPQTRDGIQAVSMDMGQSYQSAVRNALPKADIVFDRFHVMQNYSLLIRKERNKAFRKGTHDEKKMLKGTLFLLLKNAPKLSDNQSDRLDDLLESNKTLCT
IYMLKEQLQALWDERHFDLMIAALDAWCQLAKKTRILSLINFADALWERRVGICNYAKYKLTNARVEAGNVSIGLLRRRARGVRDTDYFKLKIRQTSILE
THSTIYPEIKLI
Blast result :
Comments
ISVa7 is 86% aa similar to ISShha2.
References
1] K. Olav Holm (2016) Direct submission
2] Bay L, Larsen JL, Leisner JJ. (2007) Syst Appl Microbiol. Mar;30(2):85-92
2] Bay L, Larsen JL, Leisner JJ. (2007) Syst Appl Microbiol. Mar;30(2):85-92