ISMamu1

  • Family ISNCY
  • Group ISDol1
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
ATBP01001296 ND Candidatus Magnetoglobus
Candidatus Magnetoglobus multicellularis Araruama
DNA section
IS Length : 2058 bp

Ends


IR Length : 14/17

IRL : GTGCTTGGCCGAAAAATGAATAATAAAAATAATATTAATATGTTGAAATA
IRR : GTGCCTGAACGAAAAATATAAAAATCAAAAAATTTTTTCGTATTTTACCT

Insertion site


Left flankDirect repeatRight flankDR Length
TTCCGGAAAACTAAGGTAAACTATATATAGTACCCATTAAAT0

DNA sequence

GTGCTTGGCCGAAAAATGAATAATAAAAATAATATTAATATGTTGAAATATAATCGATCTTTCGAAGATTTATAATTTTTTATCAAAAAGTACTTGACAT
AATTACTACCATATAGTATATAAAATATTGAAATTATTTTAATAATAAATACTACCTGGCATGTTTTTTGCAGTAGTATTTTGAGAGAAACAACAAATCT
TCGGAGAGGTATCTTATGAGATTTTCATTTGAGCAACAACCAAAATTGAATCAGATTTTGATCAGCGATGTTGAAATTGATATTTCATCTCGTGATGAAA
TCCCTCAAATTTTAATTGGATTACAGCATATTTTTGAAAACAAATCATTACGAGATAAAATATTTGACATTCTTTTAGAAGCAGTTCCTGAAAATATTAG
TATTGACAGGGGCCGACGTGGAATGGATATGTGGACAATTTTAGTGCTTGGAACTGTTCGCCTTAATTGTAATTGGGATTATGACAAAGTACATGAAATT
GCAAACAACCATTTAACATTACGAAAAATGTTAGGTCATGGTTTGAAAATGAGTGGCAATGTAGTTGATGATGGTGTAAACTATGCACTGCAGACAATCA
AAGATAATGTTTCATTATTGACCCCTGATTTGCTTGACAGGATCAATGAACTTGTTGTGAAAGAAGGCCATAAACTGTTAAGCAAAACTGATATTAAACA
GAATGAAAATGATAAAAATAAAGCAGAAGGAAAAGATAACGAAACAAAGGTTGCAGTGGATCAAAACGAAAAAACAGATGATGAAAAGAATGAAAACGAT
GATAATAAATTACATTGTAAATGTGATTCATATGTTCTTGAAACAGATGTTCATTTTCCAACAGATATAAACCTATTATACGATGCAGTGAGGGTGATGA
TAAAACTAATAGCTGCTTTATGTGGAAAGCTGGGAATAACTGAATGGCGACAATCTATCTATTACATTGGTAAAATAAAAAAATATTATCGCGTGATAAT
GAAATTAAAAAGATCGACCTCAAAGGATGAGACGAAAAAGGCCCAAAGAGATCAACAAATTAAAGATGCTTATAGCGATTACATTGAATTAGTTGAAAGC
TATGTCATTAAATGCAAAAAGACCATTCAAAATATACAGGGGATTGAATCAGAAACTGATGAAGAAACTCTGAAAGAAATCTGCGAAAAAATCGAAAAAG
CCGAACTCTTATTAGACCAAATAGACAGGCGGGCGATAAAAGGAGAAACAATTCCTCATGATGAAAAAATATTTTCAATATTTGAAGAACATACCGAGTG
GATAAAAAAGGGAAAAGCAGGGGTGCTGGTTGAATTGGGAGTGAGAGTGAGCATACTTGAAGATCAGCATGGATTTATTCTAAATCACATAGTGATGGAA
AAAATGACAGATGATAAAGTTGCAGTAGAAATAGTAACAGCCGCACAAGAAAAATTTCCGAATATATCAAGCTGCAGTTTTGACAAGGGATATTATACAC
CATCAAACCGCAGAGAATTGAGTGAAATATTAGAAACAGTAGTGATGCCAAAAAAAGGCAAATTGAATAAATCCGACGCTGAACTGGAAAAATCAGATGA
ATTTATCCGAATCCGAAAAAAACATTCAGGAGTAGAATCGGCAATAAACGCATTAGAAAATCATGGATTAGATAGATGTCCTGATCATGGAATAGATGGA
TTTAAAAGGTATGTATCCTTAGGAATTTTGGCAAGAAATATACAGAAAATAGGGCAGATAATACAAAAGAAGGAACAAAAGAAAGAAAGTAGGAAGAAAA
AAATCCAGGAAACTTGGAATCAAAAGAAAGCGGCATAAAATCTTGTCGTCAACAAAATAATAGGTAGAAGAAATGAAAACACAGGATTGGTGTAACAAAA
AATATGTTATTTGTTTAAATAAAATTTGGAAGACCTGGGAAAAATGTATTTTTGATGGATATTTATAAAATGAAGCATATTCATTATCAAGACTACCGAA
CGGTCGTTAGGTAAAATACGAAAAAATTTTTTGATTTTTATATTTTTCGTTCAGGCAC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1623 bp540 aa2161838+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MRFSFEQQPKLNQILISDVEIDISSRDEIPQILIGLQHIFENKSLRDKIFDILLEAVPENISIDRGRRGMDMWTILVLGTVRLNCNWDYDKVHEIANNHL
TLRKMLGHGLKMSGNVVDDGVNYALQTIKDNVSLLTPDLLDRINELVVKEGHKLLSKTDIKQNENDKNKAEGKDNETKVAVDQNEKTDDEKNENDDNKLH
CKCDSYVLETDVHFPTDINLLYDAVRVMIKLIAALCGKLGITEWRQSIYYIGKIKKYYRVIMKLKRSTSKDETKKAQRDQQIKDAYSDYIELVESYVIKC
KKTIQNIQGIESETDEETLKEICEKIEKAELLLDQIDRRAIKGETIPHDEKIFSIFEEHTEWIKKGKAGVLVELGVRVSILEDQHGFILNHIVMEKMTDD
KVAVEIVTAAQEKFPNISSCSFDKGYYTPSNRRELSEILETVVMPKKGKLNKSDAELEKSDEFIRIRKKHSGVESAINALENHGLDRCPDHGIDGFKRYV
SLGILARNIQKIGQIIQKKEQKKESRKKKIQETWNQKKAA

 

Blast result :
Comments
ISMamu1 is 62% aa similar to ISPph5.
References
1] ISfinder annotation (2016)
2] Vasconcelos,A.T.R., Motta,C. and Almeida,L.G.P. (2012) Direct submission GenBank.