ISGys1
- Family ISNCY
- Group ISDol1
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP007142 | ND | Gynuella sunshinyii | Gynuella sunshinyii YC6258 |
DNA section
IS Length : 1646 bp
Ends
IR Length : 16
IRL : GTGCCCATCCATAAACACATAACTCCTTGATATTATTGACAAATATTTCT
IRR : GTGCCCATCCATAAACCGAGGTTTTTGATTTTTTTATGATGCAATAGGGT
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CCTTCTCAAC | TAATTA | GGGGCTGAAA | 6 |
DNA sequence
GTGCCCATCCATAAACACATAACTCCTTGATATTATTGACAAATATTTCTGACAGGCATAAAAAATCCTTTTGGTATTTGATAGCGTTTAATCACCACAA
AAAAACACAACCAAACCAAAAGGATTCCACATGCGAGAAGCTCGTCATGCTCAGCTGAGTTTAACTGAATCATTCTCTGAACACGAGACCGGGCAGCAGC
TCAAACATCTCTCCAGGGTGCTTGATCAACATCCAGAGTTAGTCGATTGGGTACATGCGGACCTCACTCAACATCATCCACAGGCAACCGGCAGTAAAGG
GTTAACGTCGGAGAGTGTGCTTCGATGCCTGCTCATCAAACAGCTGTTCCAATTCAGTTATGAGCAGATGGCGTTCCATTTGTCCGATTCTGCCACTTAT
CGTGCCTTTGCCCGCTTGCCCATGGGAGTTTTTCCCAGTCGTTCGAGCTTGCAAAGCAGTATCCGTACAATTCAACCCATGACGCTGCAGACACTTAATA
CCAAACTGATTAGACACTGGCTGAACGAGGGCATTGTCAATATTGAACACTTGCGTATCGACAGTACCGTGATCAAGAGTCATATTGCTTCGCCCAGTGA
TAGTCAGTTATTGGATGATGGTATTCGTGTGCTCAGCCGACTACTGGCAAAAAGCAAAGACGACACCGGCATCCGGTTTCGGTTTACCGATCAGCGTAAG
GCGTCAAAATCCTTGGCGTTTCGCATCTTCAATGCCAAGCAGGCCGAGAAAGATCATCTGTATCCTCAGCTGTTGCGTATTGCAGAGCGAGTGTTGAAAC
AAGTTGATCGAGCCTTGAACCGAATCACCTCGGCACCCCAGTGGCGTGAGCGCCTCATTCACTCTCGTGATCTGCTGGTGCGCGTGATTCATCAAACCAC
GCGGCGTGTGATTGATCAGCAACAGGTTCCTGCATCCGAAAAGATCGTGAGTCTTTTCGAAGCGCATACCGACATCATTATCAAAGGTTTTCGAGATGTA
CAGTTTGGCCACAAAGTGAATTTATCATCGGATGCGTCAGGTTTTTTAACCTACTGCTGCATTGAGGAAGGCAATACCAGTGATAAGGAACTTTTCTTAC
CAGTATTGAGAGCGCATCAGAGCGATTATCAACGTCTGCCCAAGCGAACCATTGCGGATGGCGGCTATGCGAGCCAGGCGAATGTGCTCGAGGGCCGTCA
ACTGGGTGTTCAAGCGGTTGCCTTCCAAAAACCCGTGGGGTTAACGTTGAGCCAGATGGGATTAACACAAAAAACGCTCACAAAGTTGGCCAACTTTAGA
GCAGAGATTGAGGGTAATATCTCGGAACTCAAGCGTCGATTTGGTTGTTCGATGGCTCGGTGGAAAGGCAAAGAAGGCTTCCAGGCATTTGTCTGGTCAT
CGATACTGACCTACAACTTAATCCGGTTCGTGCGTTTGCAGCAATGACATGCCCCCAGGTCGACATAGAGCGATGATGCATCGACAGGATGTATCGTTGG
CATGCCTGAGAATCGACAAGATTTAAGTGTCTGGTCTAAAATTTAAACAATCAGCGGTGTAAGGAGAGATGAAGCAATAGGGCTACCTGTTATCGAACCC
TATTGCATCATAAAAAAATCAAAAACCTCGGTTTATGGATGGGCAC
AAAAACACAACCAAACCAAAAGGATTCCACATGCGAGAAGCTCGTCATGCTCAGCTGAGTTTAACTGAATCATTCTCTGAACACGAGACCGGGCAGCAGC
TCAAACATCTCTCCAGGGTGCTTGATCAACATCCAGAGTTAGTCGATTGGGTACATGCGGACCTCACTCAACATCATCCACAGGCAACCGGCAGTAAAGG
GTTAACGTCGGAGAGTGTGCTTCGATGCCTGCTCATCAAACAGCTGTTCCAATTCAGTTATGAGCAGATGGCGTTCCATTTGTCCGATTCTGCCACTTAT
CGTGCCTTTGCCCGCTTGCCCATGGGAGTTTTTCCCAGTCGTTCGAGCTTGCAAAGCAGTATCCGTACAATTCAACCCATGACGCTGCAGACACTTAATA
CCAAACTGATTAGACACTGGCTGAACGAGGGCATTGTCAATATTGAACACTTGCGTATCGACAGTACCGTGATCAAGAGTCATATTGCTTCGCCCAGTGA
TAGTCAGTTATTGGATGATGGTATTCGTGTGCTCAGCCGACTACTGGCAAAAAGCAAAGACGACACCGGCATCCGGTTTCGGTTTACCGATCAGCGTAAG
GCGTCAAAATCCTTGGCGTTTCGCATCTTCAATGCCAAGCAGGCCGAGAAAGATCATCTGTATCCTCAGCTGTTGCGTATTGCAGAGCGAGTGTTGAAAC
AAGTTGATCGAGCCTTGAACCGAATCACCTCGGCACCCCAGTGGCGTGAGCGCCTCATTCACTCTCGTGATCTGCTGGTGCGCGTGATTCATCAAACCAC
GCGGCGTGTGATTGATCAGCAACAGGTTCCTGCATCCGAAAAGATCGTGAGTCTTTTCGAAGCGCATACCGACATCATTATCAAAGGTTTTCGAGATGTA
CAGTTTGGCCACAAAGTGAATTTATCATCGGATGCGTCAGGTTTTTTAACCTACTGCTGCATTGAGGAAGGCAATACCAGTGATAAGGAACTTTTCTTAC
CAGTATTGAGAGCGCATCAGAGCGATTATCAACGTCTGCCCAAGCGAACCATTGCGGATGGCGGCTATGCGAGCCAGGCGAATGTGCTCGAGGGCCGTCA
ACTGGGTGTTCAAGCGGTTGCCTTCCAAAAACCCGTGGGGTTAACGTTGAGCCAGATGGGATTAACACAAAAAACGCTCACAAAGTTGGCCAACTTTAGA
GCAGAGATTGAGGGTAATATCTCGGAACTCAAGCGTCGATTTGGTTGTTCGATGGCTCGGTGGAAAGGCAAAGAAGGCTTCCAGGCATTTGTCTGGTCAT
CGATACTGACCTACAACTTAATCCGGTTCGTGCGTTTGCAGCAATGACATGCCCCCAGGTCGACATAGAGCGATGATGCATCGACAGGATGTATCGTTGG
CATGCCTGAGAATCGACAAGATTTAAGTGTCTGGTCTAAAATTTAAACAATCAGCGGTGTAAGGAGAGATGAAGCAATAGGGCTACCTGTTATCGAACCC
TATTGCATCATAAAAAAATCAAAAACCTCGGTTTATGGATGGGCAC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1317 bp | 438 aa | 131 | 1447 | + | No |
Chemistry : DDE
ORF sequence :
MREARHAQLSLTESFSEHETGQQLKHLSRVLDQHPELVDWVHADLTQHHPQATGSKGLTSESVLRCLLIKQLFQFSYEQMAFHLSDSATYRAFARLPMGV
FPSRSSLQSSIRTIQPMTLQTLNTKLIRHWLNEGIVNIEHLRIDSTVIKSHIASPSDSQLLDDGIRVLSRLLAKSKDDTGIRFRFTDQRKASKSLAFRIF
NAKQAEKDHLYPQLLRIAERVLKQVDRALNRITSAPQWRERLIHSRDLLVRVIHQTTRRVIDQQQVPASEKIVSLFEAHTDIIIKGFRDVQFGHKVNLSS
DASGFLTYCCIEEGNTSDKELFLPVLRAHQSDYQRLPKRTIADGGYASQANVLEGRQLGVQAVAFQKPVGLTLSQMGLTQKTLTKLANFRAEIEGNISEL
KRRFGCSMARWKGKEGFQAFVWSSILTYNLIRFVRLQQ
FPSRSSLQSSIRTIQPMTLQTLNTKLIRHWLNEGIVNIEHLRIDSTVIKSHIASPSDSQLLDDGIRVLSRLLAKSKDDTGIRFRFTDQRKASKSLAFRIF
NAKQAEKDHLYPQLLRIAERVLKQVDRALNRITSAPQWRERLIHSRDLLVRVIHQTTRRVIDQQQVPASEKIVSLFEAHTDIIIKGFRDVQFGHKVNLSS
DASGFLTYCCIEEGNTSDKELFLPVLRAHQSDYQRLPKRTIADGGYASQANVLEGRQLGVQAVAFQKPVGLTLSQMGLTQKTLTKLANFRAEIEGNISEL
KRRFGCSMARWKGKEGFQAFVWSSILTYNLIRFVRLQQ
Blast result :
Comments
ISGys1 is 74% aa similar to ISMaq5.
References
1] ISfinder annotation (2016)
2] Khan,H., Chung,E.J. and Chung,Y.R. (2014) Direct submission GenBank.
2] Khan,H., Chung,E.J. and Chung,Y.R. (2014) Direct submission GenBank.