ISPpu24

  • Family IS110
  • Group IS1111
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
KU130294 ND
DNA section
IS Length : 1382 bp

Ends


IR Length : 13

IRL : TGCTGTAATGGACTCTCCCCGCGCCACGGTTCTATACCTAGAACTGCGGT
IRR : ----TATATGGACTCTCCCCACAAGTAGTGAGCAAAGCTTTTCTTTTGCA

Insertion site


Left flankDirect repeatRight flankDR Length
TCGGCTTGAAATGAGTTGTT0

DNA sequence

TGCTGTAATGGACTCTCCCCGCGCCACGGTTCTATACCTAGAACTGCGGTGGCTTATCATTGGGAGAGACGTTATGAAGCGAATTGCGGTTGATCTGGCC
AAGTCCGTTTACCAAGTTGCCGAGAGTGTCCGTTCCGGCCAGGTGGTGCAGCGCAAGCGGCTGAACCGAGAGGCGTTTAGGCGATATATACAGGAGCAAG
CCGAGCCGGTCGAGTGGGTGATGGAGGCCTGCGGTACGGCCCATTACTGGGGGCGCGTGGCGCAGGCACTGGGCCATTCGGTAAAGCTGATCCACCCGCG
CTATGTGCGCCCGTATCGCCGCCGCAACAAGACCGACCGCAACGACTGCGATGCGATGCTAGAAGCCGCGCGCTGCAAGGATATCCATCCCGTGCCTGTG
AAAACCCATGAGCAGCAACAGGTGCAGCAACTGCATGGGCTGCGCGAAACCTGGAAGAAAAGCCGTACTCAGCGGATCAACCTACTGCGCGGCATCCTGC
GCGAAGCGGGCATCGAAGCTCCAGCCTCTACCGCCGCTTTTATCCGTGCCGCCCATGAGTTAGTTGAGCGCCCAGAAATCGCGCCCTTGAGCCATCAACT
GCATATCGTCCTGGCGGAAATAAACCTGCACGAACAGTGCATGGTCGAGTGCGAGCAGCAACTCAAACGCTGGCATGCCGACGATGAAGTCGTGCGCAAA
CTCGATGAAGTCAGCGGTATTGGCCTGTTGACCGCCAGCGCCCTGAAAACCGCAGTCGGCAAGCCCGAGCGCTTTGCCAATGGTCGCCAGCTCAGCGCTT
GGCTGGGCATGACGCCGCGAGAGTTCAGCAGTGGTGAGCGGCGCAAACTGGGCCACATTAGCCGGCAAGGCAATGTATACGTGCGCACCCTGTTGATCCA
CGGCTCGCGCGCGGCCTTGTTGGCAGCGCAGCGCTGTCAGGCCCGGACACCCGAGAAACTGACCCAGTTACAGCGCTGGGCCGTCGAGACGGCGGCACGT
GTTGGCCACAACAAAGCGGCCGTGGCCTTGGCCAACAAGCTGGTTAGGATTTGCTGGGCGGTGTGGTGTCATGAGCGGCGATTTAGTGGTGACTGGCAAA
GCGTAAAGCCCGCCTGACGGCGGAGGTAATCAAGAAGGCGTGATGGTTTTCTTGTGGTTGTGGTGAGTAGCAGCACTGTCGGAACAGGCGAGTCCTGCAG
CGGAATAAGGCCGATAACAATCATGATCTTCGTGATCGATTGAACGCTTGGCCCCCGCTGCGCGAACTACAGAATGGCCAGGGCGGTAGAGCCCAAAACA
GGCCGGATATACGAATGCAACCGCGCTGACGACAAGTGCAAAAGAAAAGCTTTGCTCACTACTTGTGGGGAGAGTCCATATA
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1044 bp347 aa741117+No
ORF function : Transposase
Chemistry : DEDD

ORF sequence :

MKRIAVDLAKSVYQVAESVRSGQVVQRKRLNREAFRRYIQEQAEPVEWVMEACGTAHYWGRVAQALGHSVKLIHPRYVRPYRRRNKTDRNDCDAMLEAAR
CKDIHPVPVKTHEQQQVQQLHGLRETWKKSRTQRINLLRGILREAGIEAPASTAAFIRAAHELVERPEIAPLSHQLHIVLAEINLHEQCMVECEQQLKRW
HADDEVVRKLDEVSGIGLLTASALKTAVGKPERFANGRQLSAWLGMTPREFSSGERRKLGHISRQGNVYVRTLLIHGSRAALLAAQRCQARTPEKLTQLQ
RWAVETAARVGHNKAAVALANKLVRICWAVWCHERRFSGDWQSVKPA

 

Blast result :
Comments
ISPpu24 is 98% aa similar to ISPa119.
References
1] Dongsheng Zhou (2015) Direct submission

2] Sun,F., Zhou,D., Wang,Q., Feng,J., Feng,W., Luo,W., Liu,Y., Qiu,X., Yin,Z. and Xia,P. (2015) J. Antimicrob. Chemother. In press