ISPpu24
- Family IS110
- Group IS1111
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
KU130294 | ND |
DNA section
IS Length : 1382 bp
Ends
IR Length : 13
IRL : TGCTGTAATGGACTCTCCCCGCGCCACGGTTCTATACCTAGAACTGCGGT
IRR : ----TATATGGACTCTCCCCACAAGTAGTGAGCAAAGCTTTTCTTTTGCA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
TCGGCTTGAA | ATGAGTTGTT | 0 |
DNA sequence
TGCTGTAATGGACTCTCCCCGCGCCACGGTTCTATACCTAGAACTGCGGTGGCTTATCATTGGGAGAGACGTTATGAAGCGAATTGCGGTTGATCTGGCC
AAGTCCGTTTACCAAGTTGCCGAGAGTGTCCGTTCCGGCCAGGTGGTGCAGCGCAAGCGGCTGAACCGAGAGGCGTTTAGGCGATATATACAGGAGCAAG
CCGAGCCGGTCGAGTGGGTGATGGAGGCCTGCGGTACGGCCCATTACTGGGGGCGCGTGGCGCAGGCACTGGGCCATTCGGTAAAGCTGATCCACCCGCG
CTATGTGCGCCCGTATCGCCGCCGCAACAAGACCGACCGCAACGACTGCGATGCGATGCTAGAAGCCGCGCGCTGCAAGGATATCCATCCCGTGCCTGTG
AAAACCCATGAGCAGCAACAGGTGCAGCAACTGCATGGGCTGCGCGAAACCTGGAAGAAAAGCCGTACTCAGCGGATCAACCTACTGCGCGGCATCCTGC
GCGAAGCGGGCATCGAAGCTCCAGCCTCTACCGCCGCTTTTATCCGTGCCGCCCATGAGTTAGTTGAGCGCCCAGAAATCGCGCCCTTGAGCCATCAACT
GCATATCGTCCTGGCGGAAATAAACCTGCACGAACAGTGCATGGTCGAGTGCGAGCAGCAACTCAAACGCTGGCATGCCGACGATGAAGTCGTGCGCAAA
CTCGATGAAGTCAGCGGTATTGGCCTGTTGACCGCCAGCGCCCTGAAAACCGCAGTCGGCAAGCCCGAGCGCTTTGCCAATGGTCGCCAGCTCAGCGCTT
GGCTGGGCATGACGCCGCGAGAGTTCAGCAGTGGTGAGCGGCGCAAACTGGGCCACATTAGCCGGCAAGGCAATGTATACGTGCGCACCCTGTTGATCCA
CGGCTCGCGCGCGGCCTTGTTGGCAGCGCAGCGCTGTCAGGCCCGGACACCCGAGAAACTGACCCAGTTACAGCGCTGGGCCGTCGAGACGGCGGCACGT
GTTGGCCACAACAAAGCGGCCGTGGCCTTGGCCAACAAGCTGGTTAGGATTTGCTGGGCGGTGTGGTGTCATGAGCGGCGATTTAGTGGTGACTGGCAAA
GCGTAAAGCCCGCCTGACGGCGGAGGTAATCAAGAAGGCGTGATGGTTTTCTTGTGGTTGTGGTGAGTAGCAGCACTGTCGGAACAGGCGAGTCCTGCAG
CGGAATAAGGCCGATAACAATCATGATCTTCGTGATCGATTGAACGCTTGGCCCCCGCTGCGCGAACTACAGAATGGCCAGGGCGGTAGAGCCCAAAACA
GGCCGGATATACGAATGCAACCGCGCTGACGACAAGTGCAAAAGAAAAGCTTTGCTCACTACTTGTGGGGAGAGTCCATATA
AAGTCCGTTTACCAAGTTGCCGAGAGTGTCCGTTCCGGCCAGGTGGTGCAGCGCAAGCGGCTGAACCGAGAGGCGTTTAGGCGATATATACAGGAGCAAG
CCGAGCCGGTCGAGTGGGTGATGGAGGCCTGCGGTACGGCCCATTACTGGGGGCGCGTGGCGCAGGCACTGGGCCATTCGGTAAAGCTGATCCACCCGCG
CTATGTGCGCCCGTATCGCCGCCGCAACAAGACCGACCGCAACGACTGCGATGCGATGCTAGAAGCCGCGCGCTGCAAGGATATCCATCCCGTGCCTGTG
AAAACCCATGAGCAGCAACAGGTGCAGCAACTGCATGGGCTGCGCGAAACCTGGAAGAAAAGCCGTACTCAGCGGATCAACCTACTGCGCGGCATCCTGC
GCGAAGCGGGCATCGAAGCTCCAGCCTCTACCGCCGCTTTTATCCGTGCCGCCCATGAGTTAGTTGAGCGCCCAGAAATCGCGCCCTTGAGCCATCAACT
GCATATCGTCCTGGCGGAAATAAACCTGCACGAACAGTGCATGGTCGAGTGCGAGCAGCAACTCAAACGCTGGCATGCCGACGATGAAGTCGTGCGCAAA
CTCGATGAAGTCAGCGGTATTGGCCTGTTGACCGCCAGCGCCCTGAAAACCGCAGTCGGCAAGCCCGAGCGCTTTGCCAATGGTCGCCAGCTCAGCGCTT
GGCTGGGCATGACGCCGCGAGAGTTCAGCAGTGGTGAGCGGCGCAAACTGGGCCACATTAGCCGGCAAGGCAATGTATACGTGCGCACCCTGTTGATCCA
CGGCTCGCGCGCGGCCTTGTTGGCAGCGCAGCGCTGTCAGGCCCGGACACCCGAGAAACTGACCCAGTTACAGCGCTGGGCCGTCGAGACGGCGGCACGT
GTTGGCCACAACAAAGCGGCCGTGGCCTTGGCCAACAAGCTGGTTAGGATTTGCTGGGCGGTGTGGTGTCATGAGCGGCGATTTAGTGGTGACTGGCAAA
GCGTAAAGCCCGCCTGACGGCGGAGGTAATCAAGAAGGCGTGATGGTTTTCTTGTGGTTGTGGTGAGTAGCAGCACTGTCGGAACAGGCGAGTCCTGCAG
CGGAATAAGGCCGATAACAATCATGATCTTCGTGATCGATTGAACGCTTGGCCCCCGCTGCGCGAACTACAGAATGGCCAGGGCGGTAGAGCCCAAAACA
GGCCGGATATACGAATGCAACCGCGCTGACGACAAGTGCAAAAGAAAAGCTTTGCTCACTACTTGTGGGGAGAGTCCATATA
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1044 bp | 347 aa | 74 | 1117 | + | No |
Chemistry : DEDD
ORF sequence :
MKRIAVDLAKSVYQVAESVRSGQVVQRKRLNREAFRRYIQEQAEPVEWVMEACGTAHYWGRVAQALGHSVKLIHPRYVRPYRRRNKTDRNDCDAMLEAAR
CKDIHPVPVKTHEQQQVQQLHGLRETWKKSRTQRINLLRGILREAGIEAPASTAAFIRAAHELVERPEIAPLSHQLHIVLAEINLHEQCMVECEQQLKRW
HADDEVVRKLDEVSGIGLLTASALKTAVGKPERFANGRQLSAWLGMTPREFSSGERRKLGHISRQGNVYVRTLLIHGSRAALLAAQRCQARTPEKLTQLQ
RWAVETAARVGHNKAAVALANKLVRICWAVWCHERRFSGDWQSVKPA
CKDIHPVPVKTHEQQQVQQLHGLRETWKKSRTQRINLLRGILREAGIEAPASTAAFIRAAHELVERPEIAPLSHQLHIVLAEINLHEQCMVECEQQLKRW
HADDEVVRKLDEVSGIGLLTASALKTAVGKPERFANGRQLSAWLGMTPREFSSGERRKLGHISRQGNVYVRTLLIHGSRAALLAAQRCQARTPEKLTQLQ
RWAVETAARVGHNKAAVALANKLVRICWAVWCHERRFSGDWQSVKPA
Blast result :
Comments
ISPpu24 is 98% aa similar to ISPa119.
References
1] Dongsheng Zhou (2015) Direct submission
2] Sun,F., Zhou,D., Wang,Q., Feng,J., Feng,W., Luo,W., Liu,Y., Qiu,X., Yin,Z. and Xia,P. (2015) J. Antimicrob. Chemother. In press
2] Sun,F., Zhou,D., Wang,Q., Feng,J., Feng,W., Luo,W., Liu,Y., Qiu,X., Yin,Z. and Xia,P. (2015) J. Antimicrob. Chemother. In press