ISRama1
- Family IS1595
- Group ISSod11
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP010801 | ND | Ralstonia mannitolilytica | Ralstonia mannitolilytica SN82F48 plasmid pRMAN01 |
DNA section
IS Length : 1090 bp
Ends
IR Length :
IRL : AAGGGCTATCCACTTAGCTCCAGCCATGCCAGAATCACTGGATGGATATA
IRR : GTGGGGTATCCACTTAGCTCCACCAGCACAGGATAACTGGATGGATATAC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
AAACAACTGT | ATATATGT | ACAGTATATC | 8 |
DNA sequence
AAGGGCTATCCACTTAGCTCCAGCCATGCCAGAATCACTGGATGGATATACAGGTAAAGCAGATATTACCCCCAGAACCGGGGAAGGACTACCCCCGTAA
CTGGAACGAGTTTCTGGACCGGTTCGGGACGGAAGAGGCTTGCCTGTCCTACCTGGAGGGATTGCGGTGGCCGCAGGGGTTCGTTTGCCCTGATTGCGGC
GTAGCGGCCGAGCCTTATCGGTCGAGCCGCACGCGCCTGATGTGTCGCAGTTGCGCTCACCAAACGACGGTGACCGCTGGCACGATATTCGACAAGACCC
GTACCCCGCTACGTGTGTGGCTGGCTGGTGCGTGGTATCTGACCAATCAAAAGCAAGGCGTCAGCGCCCTTGGTTTGCAACGGGTGCTAGGCCTGGGAAG
CTACCAGACCGCTTGGACGATGCTGCACCGGTTTCGCCGCGCTATGGTGCGACCGGACCGCGAACGCCTGAAGGGGTGTGTAGAGGTTGACGAGACCTAC
CTGGCCATCACGGACCGAGAGGCCCCTATCTCGGCCATCAACCGCAAGAACCGCACGAGCAAAGTGCTGGTCATCCTTGCGGTCGAAATGCTTCAGCCCA
AGGGCTTCGGCCGGATACGCTTGCAGCGCATCCAGAACGATGGCGCCGAATGCGTCATCCCGTTCATACAGGCGTCGATTGAGCCTGGCGCCCAAGTCAG
AACTGACGGGTCAGCAGCCTACCGGACATTGAGCAAGCTGGGTTACGAACACCAGCGCAATGTGATGCTGGGTGCCGAGGTGCCAGCTCACGTTTCGATG
GCTGGCGTTCATCGGGTTGCTTCACTGGTCAAACGCTGGATTCTCGGCACGCATCACGGCTCGGTTCAGCCCGAACATCTGGACGCCTACCTGGATGAGT
TCGTGTTCCGCTTCAATCGCCGCACCTCGGGCTCGCGCGGTCTCTTGTTCTATCGGCTGCTTCAGCAAGCGGTCGTTACCGGCCCTGTGACGTATGCGGA
TGTAGTGAACCGGGTCGAGACGGTGTAGCATACGAATACTGTATATCCATCCAGTTATCCTGTGCTGGTGGAGCTAAGTGGATACCCCAC
CTGGAACGAGTTTCTGGACCGGTTCGGGACGGAAGAGGCTTGCCTGTCCTACCTGGAGGGATTGCGGTGGCCGCAGGGGTTCGTTTGCCCTGATTGCGGC
GTAGCGGCCGAGCCTTATCGGTCGAGCCGCACGCGCCTGATGTGTCGCAGTTGCGCTCACCAAACGACGGTGACCGCTGGCACGATATTCGACAAGACCC
GTACCCCGCTACGTGTGTGGCTGGCTGGTGCGTGGTATCTGACCAATCAAAAGCAAGGCGTCAGCGCCCTTGGTTTGCAACGGGTGCTAGGCCTGGGAAG
CTACCAGACCGCTTGGACGATGCTGCACCGGTTTCGCCGCGCTATGGTGCGACCGGACCGCGAACGCCTGAAGGGGTGTGTAGAGGTTGACGAGACCTAC
CTGGCCATCACGGACCGAGAGGCCCCTATCTCGGCCATCAACCGCAAGAACCGCACGAGCAAAGTGCTGGTCATCCTTGCGGTCGAAATGCTTCAGCCCA
AGGGCTTCGGCCGGATACGCTTGCAGCGCATCCAGAACGATGGCGCCGAATGCGTCATCCCGTTCATACAGGCGTCGATTGAGCCTGGCGCCCAAGTCAG
AACTGACGGGTCAGCAGCCTACCGGACATTGAGCAAGCTGGGTTACGAACACCAGCGCAATGTGATGCTGGGTGCCGAGGTGCCAGCTCACGTTTCGATG
GCTGGCGTTCATCGGGTTGCTTCACTGGTCAAACGCTGGATTCTCGGCACGCATCACGGCTCGGTTCAGCCCGAACATCTGGACGCCTACCTGGATGAGT
TCGTGTTCCGCTTCAATCGCCGCACCTCGGGCTCGCGCGGTCTCTTGTTCTATCGGCTGCTTCAGCAAGCGGTCGTTACCGGCCCTGTGACGTATGCGGA
TGTAGTGAACCGGGTCGAGACGGTGTAGCATACGAATACTGTATATCCATCCAGTTATCCTGTGCTGGTGGAGCTAAGTGGATACCCCAC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
987 bp | 328 aa | 42 | 1028 | + | No |
Chemistry : DDE
ORF sequence :
MDIQVKQILPPEPGKDYPRNWNEFLDRFGTEEACLSYLEGLRWPQGFVCPDCGVAAEPYRSSRTRLMCRSCAHQTTVTAGTIFDKTRTPLRVWLAGAWYL
TNQKQGVSALGLQRVLGLGSYQTAWTMLHRFRRAMVRPDRERLKGCVEVDETYLAITDREAPISAINRKNRTSKVLVILAVEMLQPKGFGRIRLQRIQND
GAECVIPFIQASIEPGAQVRTDGSAAYRTLSKLGYEHQRNVMLGAEVPAHVSMAGVHRVASLVKRWILGTHHGSVQPEHLDAYLDEFVFRFNRRTSGSRG
LLFYRLLQQAVVTGPVTYADVVNRVETV
TNQKQGVSALGLQRVLGLGSYQTAWTMLHRFRRAMVRPDRERLKGCVEVDETYLAITDREAPISAINRKNRTSKVLVILAVEMLQPKGFGRIRLQRIQND
GAECVIPFIQASIEPGAQVRTDGSAAYRTLSKLGYEHQRNVMLGAEVPAHVSMAGVHRVASLVKRWILGTHHGSVQPEHLDAYLDEFVFRFNRRTSGSRG
LLFYRLLQQAVVTGPVTYADVVNRVETV
Blast result :
Comments
References