ISPa61
- Family ISL3
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
ND | Pseudomonas aeruginosa | Pseudomonas aeruginosa HN39 plasmid pHN39-SIM |
DNA section
IS Length : 1219 bp
Ends
IR Length : 11/16
IRL : GTTGATTCACGATCGCCGGATTCGTCTGGTGCGTGATCGTGATCTGTTCG
IRR : GCTGATTCCCAATGCCGCGCAAATACCCGACAGCCTCAAGGACGAATACA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CAGTTCAGCCC | GCAAGGTCGAG | 0 |
DNA sequence
GTTGATTCACGATCGCCGGATTCGTCTGGTGCGTGATCGTGATCTGTTCGATCAGCGCGTCCTGCTTCAACTACCAGTGCGCCGAGTCGATTGCCTGAGT
TGTGGGCGGGTGACCGAGCGGATCGACTGGTTGGAGCCAGCATCTCGGCTGACCCAGCGGTTACGGATATGGCTCGAAAGCTTGCTGCGGCTGCTGCCGA
TCAGCCACGTCAGCCAGCTCACCGGCCTGCATTGGCACACCCTCAAAACGCTCGATAAACGACGCCTTCAAGCCGAGGTAGGCAACTTCGATTCAACCGG
TGTCCGCCGCCTGGTGATGGACGAGTTCGCCCTGCACAAAGGGCATCGCTATGCCACGGTCATCATGGATGCCGAGCGAACGCGGGTATTGTGGGTCGGC
CACGGCAACAGCCGCGAGGCGGTCCGCCCGTTCTTTGAATTGCTCGGCAAGCACTGCCAGCAGATAGAGGCGGTGGCCATGGACATGAACACGGCTTTTG
ATTTGGAGGTGAAGAAGCATTGCCCGCAAGCCGAAGTGGTGTACGACCTGTTTCACGTCGTCGCGCGCTACGGTCGGGATGTGATCGACCGTATCCGGGT
TGACCAGGCCAACCTCCTGCGCGAAGACAAGCCGGCACGAAAGGCGGTCAAGCAAAGCCGCTGGCTGCTGCTGCGCAATCGCAACAACCTGAAGGACGGA
CAAGCCGTGCAGCTTCAAGAACTACTCGCGGCCAACCAGCCGCTGGCTACGGTCTATGTCCTCAAGGATGCGCTGAAGGATGTCTGGTTCGCCCCCAGCG
TACGAGAGGGCTGGCGCCGCTGGCGAACCTGGTTGCGGCACGCCCGGGACAGCGGCCTCGCGCCGCTACAGCGCTTCGCTCGCAACCTGCGCAAATACGC
CCGAGGCATCCTCGCCAGTGCCAACTTCCATATGCATACCAGCGTCCTTGAGGGCGTCAACAACCGCATCAAGGTGATCAAGCGTATGGCCTATGGTTTT
CGGGACTCGGAATACTTTTTCCTGAAAATCAAGGCTGCCTTCCCCGGGAAAGCGCGATGAACCTATTTTTTGGTGTCCCAGAAGTCGGCCCAGGTCTTGG
GTACGTCCGCGCCTTTGAACGCGTCCGTGCGATACGCCAGCACCGTGGAGTAGCTGATGTAGCCGACGCTGTATTCGTCCTTGAGGCTGTCGGGTATTTG
CGCGGCATTGGGAATCAGC
TGTGGGCGGGTGACCGAGCGGATCGACTGGTTGGAGCCAGCATCTCGGCTGACCCAGCGGTTACGGATATGGCTCGAAAGCTTGCTGCGGCTGCTGCCGA
TCAGCCACGTCAGCCAGCTCACCGGCCTGCATTGGCACACCCTCAAAACGCTCGATAAACGACGCCTTCAAGCCGAGGTAGGCAACTTCGATTCAACCGG
TGTCCGCCGCCTGGTGATGGACGAGTTCGCCCTGCACAAAGGGCATCGCTATGCCACGGTCATCATGGATGCCGAGCGAACGCGGGTATTGTGGGTCGGC
CACGGCAACAGCCGCGAGGCGGTCCGCCCGTTCTTTGAATTGCTCGGCAAGCACTGCCAGCAGATAGAGGCGGTGGCCATGGACATGAACACGGCTTTTG
ATTTGGAGGTGAAGAAGCATTGCCCGCAAGCCGAAGTGGTGTACGACCTGTTTCACGTCGTCGCGCGCTACGGTCGGGATGTGATCGACCGTATCCGGGT
TGACCAGGCCAACCTCCTGCGCGAAGACAAGCCGGCACGAAAGGCGGTCAAGCAAAGCCGCTGGCTGCTGCTGCGCAATCGCAACAACCTGAAGGACGGA
CAAGCCGTGCAGCTTCAAGAACTACTCGCGGCCAACCAGCCGCTGGCTACGGTCTATGTCCTCAAGGATGCGCTGAAGGATGTCTGGTTCGCCCCCAGCG
TACGAGAGGGCTGGCGCCGCTGGCGAACCTGGTTGCGGCACGCCCGGGACAGCGGCCTCGCGCCGCTACAGCGCTTCGCTCGCAACCTGCGCAAATACGC
CCGAGGCATCCTCGCCAGTGCCAACTTCCATATGCATACCAGCGTCCTTGAGGGCGTCAACAACCGCATCAAGGTGATCAAGCGTATGGCCTATGGTTTT
CGGGACTCGGAATACTTTTTCCTGAAAATCAAGGCTGCCTTCCCCGGGAAAGCGCGATGAACCTATTTTTTGGTGTCCCAGAAGTCGGCCCAGGTCTTGG
GTACGTCCGCGCCTTTGAACGCGTCCGTGCGATACGCCAGCACCGTGGAGTAGCTGATGTAGCCGACGCTGTATTCGTCCTTGAGGCTGTCGGGTATTTG
CGCGGCATTGGGAATCAGC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
951 bp | 316 aa | 111 | 1061 | + | No |
Chemistry : Unknow
ORF sequence :
MTERIDWLEPASRLTQRLRIWLESLLRLLPISHVSQLTGLHWHTLKTLDKRRLQAEVGNFDSTGVRRLVMDEFALHKGHRYATVIMDAERTRVLWVGHGN
SREAVRPFFELLGKHCQQIEAVAMDMNTAFDLEVKKHCPQAEVVYDLFHVVARYGRDVIDRIRVDQANLLREDKPARKAVKQSRWLLLRNRNNLKDGQAV
QLQELLAANQPLATVYVLKDALKDVWFAPSVREGWRRWRTWLRHARDSGLAPLQRFARNLRKYARGILASANFHMHTSVLEGVNNRIKVIKRMAYGFRDS
EYFFLKIKAAFPGKAR
SREAVRPFFELLGKHCQQIEAVAMDMNTAFDLEVKKHCPQAEVVYDLFHVVARYGRDVIDRIRVDQANLLREDKPARKAVKQSRWLLLRNRNNLKDGQAV
QLQELLAANQPLATVYVLKDALKDVWFAPSVREGWRRWRTWLRHARDSGLAPLQRFARNLRKYARGILASANFHMHTSVLEGVNNRIKVIKRMAYGFRDS
EYFFLKIKAAFPGKAR
Blast result :
Comments
ISPa61 is 87% aa similar to ISAeme19.
References
1] Dongsheng Zhou (2015) Direct submission.