ISPa61

  • Family ISL3
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
ND Pseudomonas aeruginosa
Pseudomonas aeruginosa HN39 plasmid pHN39-SIM
DNA section
IS Length : 1219 bp

Ends


IR Length : 11/16

IRL : GTTGATTCACGATCGCCGGATTCGTCTGGTGCGTGATCGTGATCTGTTCG
IRR : GCTGATTCCCAATGCCGCGCAAATACCCGACAGCCTCAAGGACGAATACA

Insertion site


Left flankDirect repeatRight flankDR Length
CAGTTCAGCCCGCAAGGTCGAG0

DNA sequence

GTTGATTCACGATCGCCGGATTCGTCTGGTGCGTGATCGTGATCTGTTCGATCAGCGCGTCCTGCTTCAACTACCAGTGCGCCGAGTCGATTGCCTGAGT
TGTGGGCGGGTGACCGAGCGGATCGACTGGTTGGAGCCAGCATCTCGGCTGACCCAGCGGTTACGGATATGGCTCGAAAGCTTGCTGCGGCTGCTGCCGA
TCAGCCACGTCAGCCAGCTCACCGGCCTGCATTGGCACACCCTCAAAACGCTCGATAAACGACGCCTTCAAGCCGAGGTAGGCAACTTCGATTCAACCGG
TGTCCGCCGCCTGGTGATGGACGAGTTCGCCCTGCACAAAGGGCATCGCTATGCCACGGTCATCATGGATGCCGAGCGAACGCGGGTATTGTGGGTCGGC
CACGGCAACAGCCGCGAGGCGGTCCGCCCGTTCTTTGAATTGCTCGGCAAGCACTGCCAGCAGATAGAGGCGGTGGCCATGGACATGAACACGGCTTTTG
ATTTGGAGGTGAAGAAGCATTGCCCGCAAGCCGAAGTGGTGTACGACCTGTTTCACGTCGTCGCGCGCTACGGTCGGGATGTGATCGACCGTATCCGGGT
TGACCAGGCCAACCTCCTGCGCGAAGACAAGCCGGCACGAAAGGCGGTCAAGCAAAGCCGCTGGCTGCTGCTGCGCAATCGCAACAACCTGAAGGACGGA
CAAGCCGTGCAGCTTCAAGAACTACTCGCGGCCAACCAGCCGCTGGCTACGGTCTATGTCCTCAAGGATGCGCTGAAGGATGTCTGGTTCGCCCCCAGCG
TACGAGAGGGCTGGCGCCGCTGGCGAACCTGGTTGCGGCACGCCCGGGACAGCGGCCTCGCGCCGCTACAGCGCTTCGCTCGCAACCTGCGCAAATACGC
CCGAGGCATCCTCGCCAGTGCCAACTTCCATATGCATACCAGCGTCCTTGAGGGCGTCAACAACCGCATCAAGGTGATCAAGCGTATGGCCTATGGTTTT
CGGGACTCGGAATACTTTTTCCTGAAAATCAAGGCTGCCTTCCCCGGGAAAGCGCGATGAACCTATTTTTTGGTGTCCCAGAAGTCGGCCCAGGTCTTGG
GTACGTCCGCGCCTTTGAACGCGTCCGTGCGATACGCCAGCACCGTGGAGTAGCTGATGTAGCCGACGCTGTATTCGTCCTTGAGGCTGTCGGGTATTTG
CGCGGCATTGGGAATCAGC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
951 bp316 aa1111061+No
ORF function : Transposase
Chemistry : Unknow

ORF sequence :

MTERIDWLEPASRLTQRLRIWLESLLRLLPISHVSQLTGLHWHTLKTLDKRRLQAEVGNFDSTGVRRLVMDEFALHKGHRYATVIMDAERTRVLWVGHGN
SREAVRPFFELLGKHCQQIEAVAMDMNTAFDLEVKKHCPQAEVVYDLFHVVARYGRDVIDRIRVDQANLLREDKPARKAVKQSRWLLLRNRNNLKDGQAV
QLQELLAANQPLATVYVLKDALKDVWFAPSVREGWRRWRTWLRHARDSGLAPLQRFARNLRKYARGILASANFHMHTSVLEGVNNRIKVIKRMAYGFRDS
EYFFLKIKAAFPGKAR

 

Blast result :
Comments
ISPa61 is 87% aa similar to ISAeme19.
References
1] Dongsheng Zhou (2015) Direct submission.