ISSis7
- Family IS607
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
CP001403 | ND | Sulfolobus islandicus | Sulfolobus islandicus Y.G.57.14 |
DNA section
IS Length : 1929 bp
Ends
IR Length : 0
IRL : GTCGTCAACAGTTTCCGATAAACCGTGAAGTTTATATACTTTGTATGTAA
IRR : GGTTTGGGCTTCATTGAATTTTCATGAATTTGTATCCAATCCTCAGCCCT
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CAATATAGCC | CCACCTTGAT | 0 |
DNA sequence
GTCGTCAACAGTTTCCGATAAACCGTGAAGTTTATATACTTTGTATGTAAGTTTAACTACAATGCTGAAACCTAAGGAAGTGTGCCAAAAACTAGGAATA
TCATACCGCACACTACAGAGCTATGTTAAGAAGGGTTACATAAAACCCGTGATACTACAGAGTGGAAAATGGAGGTTTAAAGAAGAGGATGTCGAAAGAC
TCATGGGGATTGTTAGGAAGAGGAAAGTAGTATTATACGCTAGGGTATCATCAAACACACAGAAAGACGACTTAATAAACCAAGTAAAATACCTGGAGGA
GAACGTTAAAGAATACGACCAAGTAATAACTGACGTCGGATCCGGGTTGAACATGAAGAGGAAAGGATTCCTCAAGCTATTGAGAATGATACTAAACAAC
GAAGTATCGAAAGTTGTCATAGCCTACCCGGACAGACTAGTTAGGTTCGGTTTCGAGATAATTGAAGAAGTATGCAAAGCACACAACTGCGAGCTCGTGG
TATTAAATAAGGAGGACAAAACACCAGAGCAGGAACTAATCGAAGATTTGATCTCTATACTGGTATCATTTAGCGGAAAGTTGTATGGTATGAGGAGTCA
CAAATACGAAAAGGTGAAGAAATGTGTCGAAGAACTTAAGGCTTAATGACTTTCAACCACAAGAGGAATACGTTTACCTAACTTACTCCCTGAAGAATAA
TAAGAAGGTGAAGAGCAAGATATTACTAGAGAACTATAAACACCTACTACAGAAGGCTTTAGACTGGTTATGGGAGAGGACTAAGATAGAGAGGAAGGAG
GTCAAGAAGGGCAAGAAAATTTTCGCTAAGGTTAAAGTAACCTTGCCAAAGAAAAAGGAAGTTTACAAGGTGTTGAGGGATGAGTTAGAGAAGGTTAACA
ATCTAGCTTCACATTACGTTGACAAAGCAATAAATGATGCTTACTCAATCTTGGATAGTTGGAGGAGGAGGGCTGAAAAAGGACAAGCGTCATTAAGGAA
ACCTAGATTGAAGAAGGTTTACGTTAGGGTAAAGTCGACACTTAGAAAGGTTGAGGGTGAGAGTGTAAGGGTTACAGTAAGACTTTACGAATACGTCACC
TTCTCATGGTCTCACAAATGGTTTTCAAGGAGGGTTGAAGGGCTTGAGTTGGGTGAGCCAATAATTAAGGAGGATAGAGTTCACCTACCATTCCGTTACA
GATTGCCTTGGTTTTCACCCCTAGATTTCCTAGCAATTGATAGCAACCTTTACACATTGGACGCTTATGATGGGGAGAAGTTTGTTACATTTTCCTTGAA
GGAGTTGTACAGTCTAAAATTCGGTATGGAGTTGAAGAGGAGTAAAATACAATCTTTTGCTTCTAAACACGGTAGGAAGGGAAAGGTATTGTTGAGGAGG
TACTCCCACCGTGAAAGGAACCGTGTGCTGGATTATGTTCACAAGTTCGTGAATAAGTTGCTGGAGACGTATCCTCTCACTATGTTTGCTGTTGAGAAGT
TGAATAAGCAGTCAATGTTCCAAGACGCTGATGACAAGCTGTCTAAGAGGATTTCAAGGACTGTGTGGAGGACTATACACCGTGTGGTAAAGTACAAGGC
TCCCCTTTATGGTTCTTTCGTTAAGGAGGTGAGCCCACATCTCACTTCCAAGTCCTGCCCCAGATGTGGATGGGTTTCCCGAAAGGTCGGCAGGACTTTT
CACTGCGAGAGGTGCGGGTTCACTCTGGATAGGCAATTGAACGCATTTCTCAATATTTACCTCAAGATGTGCGGGTTCCCCTACATCCGTGATATTCCGC
GGGTGTGGGTCGGGGTTATCCCGCTAAAGGGGCGGAGGGGTATGAACGGGGCAATGCCCCGTGACTCTGTTGAAGCCCAAGGGCTGAGGATTGGATACAA
ATTCATGAAAATTCAATGAAGCCCAAACC
TCATACCGCACACTACAGAGCTATGTTAAGAAGGGTTACATAAAACCCGTGATACTACAGAGTGGAAAATGGAGGTTTAAAGAAGAGGATGTCGAAAGAC
TCATGGGGATTGTTAGGAAGAGGAAAGTAGTATTATACGCTAGGGTATCATCAAACACACAGAAAGACGACTTAATAAACCAAGTAAAATACCTGGAGGA
GAACGTTAAAGAATACGACCAAGTAATAACTGACGTCGGATCCGGGTTGAACATGAAGAGGAAAGGATTCCTCAAGCTATTGAGAATGATACTAAACAAC
GAAGTATCGAAAGTTGTCATAGCCTACCCGGACAGACTAGTTAGGTTCGGTTTCGAGATAATTGAAGAAGTATGCAAAGCACACAACTGCGAGCTCGTGG
TATTAAATAAGGAGGACAAAACACCAGAGCAGGAACTAATCGAAGATTTGATCTCTATACTGGTATCATTTAGCGGAAAGTTGTATGGTATGAGGAGTCA
CAAATACGAAAAGGTGAAGAAATGTGTCGAAGAACTTAAGGCTTAATGACTTTCAACCACAAGAGGAATACGTTTACCTAACTTACTCCCTGAAGAATAA
TAAGAAGGTGAAGAGCAAGATATTACTAGAGAACTATAAACACCTACTACAGAAGGCTTTAGACTGGTTATGGGAGAGGACTAAGATAGAGAGGAAGGAG
GTCAAGAAGGGCAAGAAAATTTTCGCTAAGGTTAAAGTAACCTTGCCAAAGAAAAAGGAAGTTTACAAGGTGTTGAGGGATGAGTTAGAGAAGGTTAACA
ATCTAGCTTCACATTACGTTGACAAAGCAATAAATGATGCTTACTCAATCTTGGATAGTTGGAGGAGGAGGGCTGAAAAAGGACAAGCGTCATTAAGGAA
ACCTAGATTGAAGAAGGTTTACGTTAGGGTAAAGTCGACACTTAGAAAGGTTGAGGGTGAGAGTGTAAGGGTTACAGTAAGACTTTACGAATACGTCACC
TTCTCATGGTCTCACAAATGGTTTTCAAGGAGGGTTGAAGGGCTTGAGTTGGGTGAGCCAATAATTAAGGAGGATAGAGTTCACCTACCATTCCGTTACA
GATTGCCTTGGTTTTCACCCCTAGATTTCCTAGCAATTGATAGCAACCTTTACACATTGGACGCTTATGATGGGGAGAAGTTTGTTACATTTTCCTTGAA
GGAGTTGTACAGTCTAAAATTCGGTATGGAGTTGAAGAGGAGTAAAATACAATCTTTTGCTTCTAAACACGGTAGGAAGGGAAAGGTATTGTTGAGGAGG
TACTCCCACCGTGAAAGGAACCGTGTGCTGGATTATGTTCACAAGTTCGTGAATAAGTTGCTGGAGACGTATCCTCTCACTATGTTTGCTGTTGAGAAGT
TGAATAAGCAGTCAATGTTCCAAGACGCTGATGACAAGCTGTCTAAGAGGATTTCAAGGACTGTGTGGAGGACTATACACCGTGTGGTAAAGTACAAGGC
TCCCCTTTATGGTTCTTTCGTTAAGGAGGTGAGCCCACATCTCACTTCCAAGTCCTGCCCCAGATGTGGATGGGTTTCCCGAAAGGTCGGCAGGACTTTT
CACTGCGAGAGGTGCGGGTTCACTCTGGATAGGCAATTGAACGCATTTCTCAATATTTACCTCAAGATGTGCGGGTTCCCCTACATCCGTGATATTCCGC
GGGTGTGGGTCGGGGTTATCCCGCTAAAGGGGCGGAGGGGTATGAACGGGGCAATGCCCCGTGACTCTGTTGAAGCCCAAGGGCTGAGGATTGGATACAA
ATTCATGAAAATTCAATGAAGCCCAAACC
Protein section
ORF number : 2
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
585 bp | 194 aa | 62 | 646 | + | No |
Chemistry : Serine
ORF sequence :
MLKPKEVCQKLGISYRTLQSYVKKGYIKPVILQSGKWRFKEEDVERLMGIVRKRKVVLYARVSSNTQKDDLINQVKYLEENVKEYDQVITDVGSGLNMKR
KGFLKLLRMILNNEVSKVVIAYPDRLVRFGFEIIEEVCKAHNCELVVLNKEDKTPEQELIEDLISILVSFSGKLYGMRSHKYEKVKKCVEELKA
KGFLKLLRMILNNEVSKVVIAYPDRLVRFGFEIIEEVCKAHNCELVVLNKEDKTPEQELIEDLISILVSFSGKLYGMRSHKYEKVKKCVEELKA
Blast result :ORF 2
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1296 bp | 431 aa | 624 | 1919 | + | No |
AG : TnpB
ORF sequence :
MSKNLRLNDFQPQEEYVYLTYSLKNNKKVKSKILLENYKHLLQKALDWLWERTKIERKEVKKGKKIFAKVKVTLPKKKEVYKVLRDELEKVNNLASHYVD
KAINDAYSILDSWRRRAEKGQASLRKPRLKKVYVRVKSTLRKVEGESVRVTVRLYEYVTFSWSHKWFSRRVEGLELGEPIIKEDRVHLPFRYRLPWFSPL
DFLAIDSNLYTLDAYDGEKFVTFSLKELYSLKFGMELKRSKIQSFASKHGRKGKVLLRRYSHRERNRVLDYVHKFVNKLLETYPLTMFAVEKLNKQSMFQ
DADDKLSKRISRTVWRTIHRVVKYKAPLYGSFVKEVSPHLTSKSCPRCGWVSRKVGRTFHCERCGFTLDRQLNAFLNIYLKMCGFPYIRDIPRVWVGVIP
LKGRRGMNGAMPRDSVEAQGLRIGYKFMKIQ
KAINDAYSILDSWRRRAEKGQASLRKPRLKKVYVRVKSTLRKVEGESVRVTVRLYEYVTFSWSHKWFSRRVEGLELGEPIIKEDRVHLPFRYRLPWFSPL
DFLAIDSNLYTLDAYDGEKFVTFSLKELYSLKFGMELKRSKIQSFASKHGRKGKVLLRRYSHRERNRVLDYVHKFVNKLLETYPLTMFAVEKLNKQSMFQ
DADDKLSKRISRTVWRTIHRVVKYKAPLYGSFVKEVSPHLTSKSCPRCGWVSRKVGRTFHCERCGFTLDRQLNAFLNIYLKMCGFPYIRDIPRVWVGVIP
LKGRRGMNGAMPRDSVEAQGLRIGYKFMKIQ
Blast result :
Comments
ISSis7 is 99% aa (ORFA : the resolvase) and 96% aa (ORFB) similar to ISSis5.
References
1] ISfinder submission (2015)
2] Reno,M.L., Held,N.L., Fields,C.J., Burke,P.V. and Whitaker,R.J. (2009) Proc. Natl. Acad. Sci. U.S.A. 106 (21), 8605-8610.
2] Reno,M.L., Held,N.L., Fields,C.J., Burke,P.V. and Whitaker,R.J. (2009) Proc. Natl. Acad. Sci. U.S.A. 106 (21), 8605-8610.