ISSis5
- Family IS607
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NC_012624 | ND | Sulfolobus islandicus | Sulfolobus islandicus Y.N.15.51 Sulfolobus islandicus Y.N.15.51 plasmid pYN01 |
DNA section
IS Length : 1935 bp
Ends
IR Length : 0
IRL : GTCGTCAACAGTTTCCGATAAACCGTGAAGTTTATATACTTTGTATGTAA
IRR : GGTTTGGGCTTCATTGAATTTTCATGAATTTGTATCCAATCCTCAGCCCT
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
ATTGTATGCC | CCAACTCATT | 0 | |
GATTTACGCC | CCGTATAGCA | 0 | |
GAGACTAGCC | CCTACCAGCT | 0 |
DNA sequence
GTCGTCAACAGTTTCCGATAAACCGTGAAGTTTATATACTTTGTATGTAAGTTTAACTACAATGCTGAAACCTAAGGAAGTGTGCCAAAAACTAGGAATA
TCATACCGCACACTACAGAGCTATGTTAAGAAGGGTTACATAAAACCCGTGATACTACAGAGTGGAAAATGGAGGTTTAAAGAAGAGGATGTCGAAAGAC
TCATGGGGGTTGTTAGGAAGAGGAAAGTAGTATTATACGCTAGGGTATCATCAAACACACAGAAAGACGACTTAATAAACCAAGTTAAGTACCTGGAGGA
GAACGTTAAGGACTACGACCAAGTAATAACAGACATTGGTTCTGGGTTGAACATGAAGAGAAAAGGATTCCTCAAGCTATTGAGAATGATACTAAACAAC
GAAGTATCGAAAGTTGTCATAGCCTACCCAGACAGACTAGTTAGGTTCGGCTTTGAAATAATAGAGGAGGCATGCAAAGCACACAACTGCGAGCTCGTGG
TATTAAATAAGGAGGACAAAACACCAGAGCAGGAACTAATCGAAGATTTGATCTCTATACTGGTATCATTTAGCGGAAAGTTGTATGGTATGAGGAGCCA
TAAATATGAGAAGGTGAAGAAGTGTGTCGAAGAGCTTAAGGCTTAAATCATTCCAACCGGAGGAGGAATACGTTTACCTAACTTACTCCCTGAAGAATAA
TAAGAAGGTGAAGAGCAAGATATTACTAGAGAACTATAAACACCTACTACAGAAGGCTTTAGACTGGTTATGGGAGAGGACTAAGATAGAGAGGAAGGAG
GTCAAGAAGGGCAAGAAAATTTTCGCTAAGGTTAAAGTAACCTTGCCAAAGAAAAAGGAAGTTTACAAGGTGTTGAGGGATGAGTTAGAGAAGGTTAACA
ATCTAGCTTCACATTACGTTGACAAAGCAATAAATGATGCTTACTCAATCTTGAATAGTTGGAGGAGGAGGGCTGAAAAAGGACAAGCGTCATTAAGGAA
ACCTAGATTGAAGAAGGTTTACGTTAGGGTAAAGTCGACACTTAGAAAGGTTGAGGGTGAGAGTGTAAGGATTACAGTAAGACCTTACGAATACGTCACC
TTCTCATGGTCTCACAAATGGTTTTCAAGGAGGGTTGAAGGGCTTGAGTTGGGTGAGCCAGTAATAAAGGAGGATAAAGTTCACCTACCATTTCGTTATA
AGTTACCTTGGTTTACTCCCCTTGACTTTCTATCTATTGATAGTAACTTGTACACATTAGACGCTTACGATGGGGAGAAGTTCGTCACATTTTCTTTGAA
GGAGTTGTATAGTTTGAAGTTCGGTATGGAGTTGAAGAGGAGTAAAATACAGTCCTTCGCTTCTAAACACGGTAGGAAGGGGAAGGTATTGTTGAGGAAG
TACTCCCACCGTGAAAGGAACCGCGTGCTTGATTATGTTCACAAGTTTGTGAACAAACTGTTGGGAATGTATCCTCTCACTATGTTTGCTGTCGAGAAGT
TGAATAAGCAGTCAATGTTCCAAGACGCTGATGATAAGCTGTCTAAGAAGGTTTCAAGGACTGTATGGAGGACTATACACCGCGTGCTTAAATACAAGGC
TCCCCTTTATGGTTCTTTCGTTAAGGAGGTGAACCCACACCTCACATCTAAGTCCTGCCCCAGATGTGGATGGGTTTCCCGAAAGGTCGGCAGGATTTTC
AAGTGTGAGAGGTGTGGGTTCACTCTAGATAGGCAACTAAACGCATCTCTCAATATTTACCTCAAGATGTGCGGGTTTCCCCACCTCTTTCTTACTCCCA
CTGGGAGTAGGTGGATTGGGGTTATCCCGCTAAAGGGGCGGAGGGGTATGAACGGGGCGTTGCCCCGCGACTCTGGTGAAGCCCAAGGGCTGAGGATTGG
ATACAAATTCATGAAAATTCAATGAAGCCCAAACC
TCATACCGCACACTACAGAGCTATGTTAAGAAGGGTTACATAAAACCCGTGATACTACAGAGTGGAAAATGGAGGTTTAAAGAAGAGGATGTCGAAAGAC
TCATGGGGGTTGTTAGGAAGAGGAAAGTAGTATTATACGCTAGGGTATCATCAAACACACAGAAAGACGACTTAATAAACCAAGTTAAGTACCTGGAGGA
GAACGTTAAGGACTACGACCAAGTAATAACAGACATTGGTTCTGGGTTGAACATGAAGAGAAAAGGATTCCTCAAGCTATTGAGAATGATACTAAACAAC
GAAGTATCGAAAGTTGTCATAGCCTACCCAGACAGACTAGTTAGGTTCGGCTTTGAAATAATAGAGGAGGCATGCAAAGCACACAACTGCGAGCTCGTGG
TATTAAATAAGGAGGACAAAACACCAGAGCAGGAACTAATCGAAGATTTGATCTCTATACTGGTATCATTTAGCGGAAAGTTGTATGGTATGAGGAGCCA
TAAATATGAGAAGGTGAAGAAGTGTGTCGAAGAGCTTAAGGCTTAAATCATTCCAACCGGAGGAGGAATACGTTTACCTAACTTACTCCCTGAAGAATAA
TAAGAAGGTGAAGAGCAAGATATTACTAGAGAACTATAAACACCTACTACAGAAGGCTTTAGACTGGTTATGGGAGAGGACTAAGATAGAGAGGAAGGAG
GTCAAGAAGGGCAAGAAAATTTTCGCTAAGGTTAAAGTAACCTTGCCAAAGAAAAAGGAAGTTTACAAGGTGTTGAGGGATGAGTTAGAGAAGGTTAACA
ATCTAGCTTCACATTACGTTGACAAAGCAATAAATGATGCTTACTCAATCTTGAATAGTTGGAGGAGGAGGGCTGAAAAAGGACAAGCGTCATTAAGGAA
ACCTAGATTGAAGAAGGTTTACGTTAGGGTAAAGTCGACACTTAGAAAGGTTGAGGGTGAGAGTGTAAGGATTACAGTAAGACCTTACGAATACGTCACC
TTCTCATGGTCTCACAAATGGTTTTCAAGGAGGGTTGAAGGGCTTGAGTTGGGTGAGCCAGTAATAAAGGAGGATAAAGTTCACCTACCATTTCGTTATA
AGTTACCTTGGTTTACTCCCCTTGACTTTCTATCTATTGATAGTAACTTGTACACATTAGACGCTTACGATGGGGAGAAGTTCGTCACATTTTCTTTGAA
GGAGTTGTATAGTTTGAAGTTCGGTATGGAGTTGAAGAGGAGTAAAATACAGTCCTTCGCTTCTAAACACGGTAGGAAGGGGAAGGTATTGTTGAGGAAG
TACTCCCACCGTGAAAGGAACCGCGTGCTTGATTATGTTCACAAGTTTGTGAACAAACTGTTGGGAATGTATCCTCTCACTATGTTTGCTGTCGAGAAGT
TGAATAAGCAGTCAATGTTCCAAGACGCTGATGATAAGCTGTCTAAGAAGGTTTCAAGGACTGTATGGAGGACTATACACCGCGTGCTTAAATACAAGGC
TCCCCTTTATGGTTCTTTCGTTAAGGAGGTGAACCCACACCTCACATCTAAGTCCTGCCCCAGATGTGGATGGGTTTCCCGAAAGGTCGGCAGGATTTTC
AAGTGTGAGAGGTGTGGGTTCACTCTAGATAGGCAACTAAACGCATCTCTCAATATTTACCTCAAGATGTGCGGGTTTCCCCACCTCTTTCTTACTCCCA
CTGGGAGTAGGTGGATTGGGGTTATCCCGCTAAAGGGGCGGAGGGGTATGAACGGGGCGTTGCCCCGCGACTCTGGTGAAGCCCAAGGGCTGAGGATTGG
ATACAAATTCATGAAAATTCAATGAAGCCCAAACC
Protein section
ORF number : 2
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
585 bp | 194 aa | 62 | 646 | + | No |
Chemistry : Serine
ORF sequence :
MLKPKEVCQKLGISYRTLQSYVKKGYIKPVILQSGKWRFKEEDVERLMGVVRKRKVVLYARVSSNTQKDDLINQVKYLEENVKDYDQVITDIGSGLNMKR
KGFLKLLRMILNNEVSKVVIAYPDRLVRFGFEIIEEACKAHNCELVVLNKEDKTPEQELIEDLISILVSFSGKLYGMRSHKYEKVKKCVEELKA
KGFLKLLRMILNNEVSKVVIAYPDRLVRFGFEIIEEACKAHNCELVVLNKEDKTPEQELIEDLISILVSFSGKLYGMRSHKYEKVKKCVEELKA
Blast result :ORF 2
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1302 bp | 433 aa | 624 | 1925 | + | No |
AG : TnpB
ORF sequence :
MSKSLRLKSFQPEEEYVYLTYSLKNNKKVKSKILLENYKHLLQKALDWLWERTKIERKEVKKGKKIFAKVKVTLPKKKEVYKVLRDELEKVNNLASHYVD
KAINDAYSILNSWRRRAEKGQASLRKPRLKKVYVRVKSTLRKVEGESVRITVRPYEYVTFSWSHKWFSRRVEGLELGEPVIKEDKVHLPFRYKLPWFTPL
DFLSIDSNLYTLDAYDGEKFVTFSLKELYSLKFGMELKRSKIQSFASKHGRKGKVLLRKYSHRERNRVLDYVHKFVNKLLGMYPLTMFAVEKLNKQSMFQ
DADDKLSKKVSRTVWRTIHRVLKYKAPLYGSFVKEVNPHLTSKSCPRCGWVSRKVGRIFKCERCGFTLDRQLNASLNIYLKMCGFPHLFLTPTGSRWIGV
IPLKGRRGMNGALPRDSGEAQGLRIGYKFMKIQ
KAINDAYSILNSWRRRAEKGQASLRKPRLKKVYVRVKSTLRKVEGESVRITVRPYEYVTFSWSHKWFSRRVEGLELGEPVIKEDKVHLPFRYKLPWFTPL
DFLSIDSNLYTLDAYDGEKFVTFSLKELYSLKFGMELKRSKIQSFASKHGRKGKVLLRKYSHRERNRVLDYVHKFVNKLLGMYPLTMFAVEKLNKQSMFQ
DADDKLSKKVSRTVWRTIHRVLKYKAPLYGSFVKEVNPHLTSKSCPRCGWVSRKVGRIFKCERCGFTLDRQLNASLNIYLKMCGFPHLFLTPTGSRWIGV
IPLKGRRGMNGALPRDSGEAQGLRIGYKFMKIQ
Blast result :
Comments
References
1] Romine, M.F. (2013) Direct submission.
2] Reno,M.L., Held,N.L., Fields,C.J., Burke,P.V. and Whitaker,R.J. (2009) Proc. Natl. Acad. Sci. U.S.A. 106 (21), 8605-8610
2] Reno,M.L., Held,N.L., Fields,C.J., Burke,P.V. and Whitaker,R.J. (2009) Proc. Natl. Acad. Sci. U.S.A. 106 (21), 8605-8610