ISSpn3

  • Family ISL3
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
HG965092 ND Streptococcus pneumoniae
Streptococcus pneumoniae 11A
DNA section
IS Length : 1479 bp

Ends


IR Length : 17/27

IRL : GGTTCTATAATTTTTAGGGTTGATGGAATTTTTCCACCAACCCTATTTTG
IRR : GGCTCTTTGTCAAATAGTGTTGATGAAGAATTTTAGGAAGGGATTAAGCA

Insertion site


Left flankDirect repeatRight flankDR Length
TACCCCGTAACAATTTGATA0

DNA sequence

GGTTCTATAATTTTTAGGGTTGATGGAATTTTTCCACCAACCCTATTTTGTGTATACAAAAAGGCCAACATCCATTATATTAAAAGCGCTGAAACCTAAA
ACAAAAGGATGATGCCCATATGCACAATATACTAGAAGCTACACCACAAATCAAAGATAAACACATGATTTGGGATAATAAAGTTCAAGAGAAGGTATTT
AAAAAGAGAATATCTTTATTTTATTCAGCTACATATACGCATAACCCAGAATTGTGCACTGTTTGTGGATGTGTTAGCCAAAATAATAATATCGTTAAAA
ACGGCACGAAAACATCTCGTATCACTCTCTGTTCTGTTTCAGGCCTTCCGGCCTACTTAAATCTACGCAAGCAGAGATTTCTCTGTAGAGAATGCGGCTC
TTCATTTACCGCAGACACTAGTCGAATCGTAGAAAAACACTGTCATATCTCTAAAAGATTAAAAAATGAAATCAAATCAAAAATTAGTGAAACAGTATCT
GAAACATATATCGCAAAAGAAACAAATGTTTCAGTTCATACTGTAAGACGTATCATAGATGATACAGCACGATTATTGACCATTAAACCATTACACGATT
TACCTGAGCATTTGTGTTTTGATGAATTTAAATCCGTTAAATCTTCCGATAGTAATATGAGCTTCATTATTTGTGATAGCACTACACACAAGCTGGTCGA
TGTTGTACGAGATAGAAAATCTTACAGTTTGAAACAATATTTTTATCGTTTTGAGCCTAAGACTAGATTAAAGGTAAAAACCATCTCTATCGACATGTAC
GTACCGTACATTCAATTAATAAAAGAAATGTTTCCTAACGCTAAAATTATCATTGATCCTTTTCACATCGTACAAGCCTTAAATAGAGAATTAAATCGAA
CTCGGGTACGTGTCATGAATCAGCATCGTTATAAAGACGCTAAATTATATCGAAAGTTAAAACATTATTGGAAGTTAATTTTAAAGAATCCTAATGAACT
TCAGAACTATAAATATAATCGTTATAAGCTTTTTGAAAGCTTTATGACAACCCAAGGAATTGTGGATTATATCTTAGAAAACAATCCATCTCTTAAACAT
GATTATGAGGTTGTACATTCACTTCGTGAATGTATACAGGATAGAGATTATATAGAATTCAAGGAAACGATTGAAGCAGCTACGCAATTAGACCTATCTC
CTGGGTTAAAAAGAGTATTAAAGACTCTTATGACTTACTTGCCATATATTCAAAATACTTGTGAGTATCCAACTAGAACAAATGGCCCTATCGAAGGAAT
AAACAATAAAATAAAAGTGCTTAAAAGAAATGCCTACGGTTTTAAAAACTATTACCATTTTAGAAACAGGATTATCTTAATAACAAAAATGTTTGGCCCA
AAACAAAAAGGAATTAAGCAACAATTAGTTGCTTAATCCCTTCCTAAAATTCTTCATCAACACTATTTGACAAAGAGCC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1317 bp438 aa1201436+No
ORF function : Transposase
Chemistry : Unknow

ORF sequence :

MHNILEATPQIKDKHMIWDNKVQEKVFKKRISLFYSATYTHNPELCTVCGCVSQNNNIVKNGTKTSRITLCSVSGLPAYLNLRKQRFLCRECGSSFTADT
SRIVEKHCHISKRLKNEIKSKISETVSETYIAKETNVSVHTVRRIIDDTARLLTIKPLHDLPEHLCFDEFKSVKSSDSNMSFIICDSTTHKLVDVVRDRK
SYSLKQYFYRFEPKTRLKVKTISIDMYVPYIQLIKEMFPNAKIIIDPFHIVQALNRELNRTRVRVMNQHRYKDAKLYRKLKHYWKLILKNPNELQNYKYN
RYKLFESFMTTQGIVDYILENNPSLKHDYEVVHSLRECIQDRDYIEFKETIEAATQLDLSPGLKRVLKTLMTYLPYIQNTCEYPTRTNGPIEGINNKIKV
LKRNAYGFKNYYHFRNRIILITKMFGPKQKGIKQQLVA

 

Blast result :
Comments
ISSpn3 is 88% aa similar to ISSau8.
References
1] Mingoia,M., Morici,E., Morroni,G., Giovanetti,E., Del Grosso,M., Pantosti,A. and Varaldo,P.E. (2014) Antimicrob. Agents Chemother. 58 (10), 5886-5893.