ISIde1
- Family ISL3
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
AJ566363 | ND | Ideonella dechloratans | Ideonella dechloratans |
DNA section
IS Length : 1448 bp
Ends
IR Length : 46/47
IRL : GGCTCTATGCCGTTTCCAGTGGAAATTGACTTCTCAACAAACATGACCCT
IRR : GGCTCTGTGCCGTTTCCAGTGGAAATTGACTTCTCAACAAACATGACGGT
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
ACTTAACACT | ATATTTTT | TCTCCTTTTG | 8 |
DNA sequence
GGCTCTATGCCGTTTCCAGTGGAAATTGACTTCTCAACAAACATGACCCTCGGTGGTACAACCGCCCGACACTGACGCCGACCTCGCGCCCGATGAACAC
CCAGATCGAAGCTCTCTTCACCACCGCACTTGGCCTGCAGCCGCCCTGGTACGTCGCCAAGGTCGAGCTCAACACAGCCAAGCGGCGGATCGACTTCGAG
GTCGAGCACACCGGCGCTCGTGCTACGTGTCCGGCGTGTGGGGCCGAGCCCCAGTTGATCCACGACCGGGTCCGGCGTAGCTGGCGTCACCTGGATTTCT
TTCAGTTCGAAGCGTGGCTGCATGCCGCGATTCCGCGCGTTCAGTGCAACGGCTGCGGCAAGACCACGCAGCTGCCGGTGCCGTGGGCGCGTGAGGGGAG
CGGCTTTACCCTGCTGTTCGAGGCGCTGAGTCTGTCGCTGTGCCGAGAGATGCCGGTGCGCCAGGCGGCCAACCAGTTGCGGGTTGCCCCGAAGCGCCTG
TGGCGCCGCGTGCGCCATTACGTCGAGGTGGCCCGTGCCAAAGACGACATGTCGTGCGTGCGCTACGTCGGGATCGACGAGACCAGCGTCAAGCGTGGTC
ACGAGTACATCACCGTCGTGCATGACCTTGAAGCCAAGCGCTTGCTGTTTGCCACCCCGGGGCGCGGTCACGCTACGTTGCAGGTCTTTGCCCAGGACAT
GCGTGCGCACGGCGGCGATCCGCTGACCATTGAGCACGCGTGTATCGACATGAGCGCGGCCTACGCCAAGGGAGTCGACCAGTCGCTGCCCAATGCCCGG
ATCAGCTACGACCGCTTTCATGTCGTGGCGCTGGCCAACGCGGCGATGGACGAGGTGCGTCGCGAAGAGATGCGTAGCTCGGCGGCAGCGGTGCGCGAAG
CGGTCGGCGCACAGAGCAAGAAGACGCTTCGTCAGCTGCTGTGGGGGATGCGCAAGAACCCGGTGAGCTGGACCCGTGCCCAGTTCGAGGCGATGCACTG
GCTGCAACGCTCGAATCTGAAGAGCGCGCGTGCGTGGCGCCTGAAGCAGGCACTGCGGCTGGTCTATCGCGATGCAGCCGCGAGCAACAGCGAGGAGATC
GCGCAAGGTGCCATGAGCAAATGGCTGAGCTGGGCGCGCCGCAGCCGCCTGGAGCCCTTCAAGCGGCTGGCCCTCACCCTGAAGGAGCACCTCGGCGGCG
TCGTGCGCGGCATGCTCGACGGACGCAGCAACGCCTACGTTGAAGCGATGAACGGCCTGCTCCAACAGACGAAGACCGCCGCCCGAGGCTTCCGCAACAT
CGAGAACTTCATCGCCATGGCCTACCTGCGAATGTCCAAGCTCAAGCATCTACCGCAGAACCCCCTGGTGCCGGCCGTCGCCCGCGACTACGGGCGCTAC
CGTCATGTTTGTTGAGAAGTCAATTTCCACTGGAAACGGCACAGAGCC
CCAGATCGAAGCTCTCTTCACCACCGCACTTGGCCTGCAGCCGCCCTGGTACGTCGCCAAGGTCGAGCTCAACACAGCCAAGCGGCGGATCGACTTCGAG
GTCGAGCACACCGGCGCTCGTGCTACGTGTCCGGCGTGTGGGGCCGAGCCCCAGTTGATCCACGACCGGGTCCGGCGTAGCTGGCGTCACCTGGATTTCT
TTCAGTTCGAAGCGTGGCTGCATGCCGCGATTCCGCGCGTTCAGTGCAACGGCTGCGGCAAGACCACGCAGCTGCCGGTGCCGTGGGCGCGTGAGGGGAG
CGGCTTTACCCTGCTGTTCGAGGCGCTGAGTCTGTCGCTGTGCCGAGAGATGCCGGTGCGCCAGGCGGCCAACCAGTTGCGGGTTGCCCCGAAGCGCCTG
TGGCGCCGCGTGCGCCATTACGTCGAGGTGGCCCGTGCCAAAGACGACATGTCGTGCGTGCGCTACGTCGGGATCGACGAGACCAGCGTCAAGCGTGGTC
ACGAGTACATCACCGTCGTGCATGACCTTGAAGCCAAGCGCTTGCTGTTTGCCACCCCGGGGCGCGGTCACGCTACGTTGCAGGTCTTTGCCCAGGACAT
GCGTGCGCACGGCGGCGATCCGCTGACCATTGAGCACGCGTGTATCGACATGAGCGCGGCCTACGCCAAGGGAGTCGACCAGTCGCTGCCCAATGCCCGG
ATCAGCTACGACCGCTTTCATGTCGTGGCGCTGGCCAACGCGGCGATGGACGAGGTGCGTCGCGAAGAGATGCGTAGCTCGGCGGCAGCGGTGCGCGAAG
CGGTCGGCGCACAGAGCAAGAAGACGCTTCGTCAGCTGCTGTGGGGGATGCGCAAGAACCCGGTGAGCTGGACCCGTGCCCAGTTCGAGGCGATGCACTG
GCTGCAACGCTCGAATCTGAAGAGCGCGCGTGCGTGGCGCCTGAAGCAGGCACTGCGGCTGGTCTATCGCGATGCAGCCGCGAGCAACAGCGAGGAGATC
GCGCAAGGTGCCATGAGCAAATGGCTGAGCTGGGCGCGCCGCAGCCGCCTGGAGCCCTTCAAGCGGCTGGCCCTCACCCTGAAGGAGCACCTCGGCGGCG
TCGTGCGCGGCATGCTCGACGGACGCAGCAACGCCTACGTTGAAGCGATGAACGGCCTGCTCCAACAGACGAAGACCGCCGCCCGAGGCTTCCGCAACAT
CGAGAACTTCATCGCCATGGCCTACCTGCGAATGTCCAAGCTCAAGCATCTACCGCAGAACCCCCTGGTGCCGGCCGTCGCCCGCGACTACGGGCGCTAC
CGTCATGTTTGTTGAGAAGTCAATTTCCACTGGAAACGGCACAGAGCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1323 bp | 440 aa | 93 | 1415 | + | No |
Chemistry : Unknow
ORF sequence :
MNTQIEALFTTALGLQPPWYVAKVELNTAKRRIDFEVEHTGARATCPACGAEPQLIHDRVRRSWRHLDFFQFEAWLHAAIPRVQCNGCGKTTQLPVPWAR
EGSGFTLLFEALSLSLCREMPVRQAANQLRVAPKRLWRRVRHYVEVARAKDDMSCVRYVGIDETSVKRGHEYITVVHDLEAKRLLFATPGRGHATLQVFA
QDMRAHGGDPLTIEHACIDMSAAYAKGVDQSLPNARISYDRFHVVALANAAMDEVRREEMRSSAAAVREAVGAQSKKTLRQLLWGMRKNPVSWTRAQFEA
MHWLQRSNLKSARAWRLKQALRLVYRDAAASNSEEIAQGAMSKWLSWARRSRLEPFKRLALTLKEHLGGVVRGMLDGRSNAYVEAMNGLLQQTKTAARGF
RNIENFIAMAYLRMSKLKHLPQNPLVPAVARDYGRYRHVC
EGSGFTLLFEALSLSLCREMPVRQAANQLRVAPKRLWRRVRHYVEVARAKDDMSCVRYVGIDETSVKRGHEYITVVHDLEAKRLLFATPGRGHATLQVFA
QDMRAHGGDPLTIEHACIDMSAAYAKGVDQSLPNARISYDRFHVVALANAAMDEVRREEMRSSAAAVREAVGAQSKKTLRQLLWGMRKNPVSWTRAQFEA
MHWLQRSNLKSARAWRLKQALRLVYRDAAASNSEEIAQGAMSKWLSWARRSRLEPFKRLALTLKEHLGGVVRGMLDGRSNAYVEAMNGLLQQTKTAARGF
RNIENFIAMAYLRMSKLKHLPQNPLVPAVARDYGRYRHVC
Blast result :
Comments
ISIde1 is 59% aa similar to ISCARN2.
References
1] Submitted by ISfinder (2014).
2] Thorell,H.D., Stenklo,K., Karlsson,J. and Nilsson,T. (2003) Appl. Environ. Microbiol. 69 (9), 5585-5592
2] Thorell,H.D., Stenklo,K., Karlsson,J. and Nilsson,T. (2003) Appl. Environ. Microbiol. 69 (9), 5585-5592