ISVa6
- Family IS30
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NZ_LK021130 | ND | Vibrio anguillarum | Vibrio anguillarum NB10
Vibrio anguillarum O1 |
DNA section
IS Length : 1091 bp
Ends
IR Length : 22/27
IRL : CTTGGATTCAAGTACGAAGTGCGACACCTCTGAACATAAAAACAGTGAGA
IRR : CTTAGTATCAAGTTTGAAGTGCGACACTTTCTACAGATGCGCATGAATAT
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
GATTGTTATG | TAT | CTTACACCAG | 3 |
CTTTGTTAGC | TTT | TTTGAGGTGC | 3 |
GATTGTTATA | CCC | GTACTGTATT | 3 |
CTTTGTTATG | TTT | AGCTTTTTAC | 3 |
DNA sequence
CTTGGATTCAAGTACGAAGTGCGACACCTCTGAACATAAAAACAGTGAGATGCGATAATCATGAAGTTTGCTCCCGCCAAGAAGTAAAAAACATGAGATA
CACGCACCTCACTGAGAACGAAAGGTATATGATTTCTGCACTCAGAAAGCAAGGAATTAGTACCGCTAAAATAGCTAAACAACTGGGTCGTCACAAAGCT
ACTATCTATCGAGAAATTGAACGCAATTCCCGATACAACAGACACTTTAAAAGGTACTCCTATCAGGCGTGGAGAGCCCAACAAATGGCTCGCAACCGGC
TGAGTCGCTCGCGCAGAAATAAGCGCTACAGCGAAATCGACTTCAGGTTACCTGAAGCCTTGCTACGACTGGATTGGAGCCCTGACCAAATCGTCGGATA
CCTAAGAGTAAGAGGCTATCCAACAATGAGTCACGAGCTCATTTATCAGCATATTTGGAACGACAAAACTCTCGGTGGAACACTATGGAAACACCTACGC
CAATCCACTAAGAAAAGGCGTAAAAGGTATAACTCAAAAGACAGCCGAGGTCGGCTGGCAGCAAAGCGTCATATTACCGAAAGACCTGCAAAAGCTGAGC
ATCGAAAAGAGCCTGGTCACTGGGAGATTGATACCGTCGTTGGCCGCGGAACCAAGCACTGTATCGTGACTTTAGTTGACAGAATGACTGGCTACACTTT
TATTGGGCAAATGGACGATAGAACAAGCGAGTCGCTCAACGTAAGAATGAGCAAAATCATGACCCGCTCTGACTTACCTTTTAAGACGATAACTGCGGAT
AACGGCACTGAATTTCATGGTTATGCACAACTAGAAAAACATCATAACTGTCTGTTTTACTTTGCAAATCCATACCACTCATGGGAGCGAGGGACTAATG
AAAACACCAATGGTTTGATACGACAATACTTACCAAAACGAACTTCTATGTCACACGTGACACAGAAGCTCTGCAATGAAATTGCACACAAATTAAATAC
GCGCCCACGCAAAAGACTTGGGTATAGGACACCAACGGAGTATATTCATGCGCATCTGTAGAAAGTGTCGCACTTCAAACTTGATACTAAG
CACGCACCTCACTGAGAACGAAAGGTATATGATTTCTGCACTCAGAAAGCAAGGAATTAGTACCGCTAAAATAGCTAAACAACTGGGTCGTCACAAAGCT
ACTATCTATCGAGAAATTGAACGCAATTCCCGATACAACAGACACTTTAAAAGGTACTCCTATCAGGCGTGGAGAGCCCAACAAATGGCTCGCAACCGGC
TGAGTCGCTCGCGCAGAAATAAGCGCTACAGCGAAATCGACTTCAGGTTACCTGAAGCCTTGCTACGACTGGATTGGAGCCCTGACCAAATCGTCGGATA
CCTAAGAGTAAGAGGCTATCCAACAATGAGTCACGAGCTCATTTATCAGCATATTTGGAACGACAAAACTCTCGGTGGAACACTATGGAAACACCTACGC
CAATCCACTAAGAAAAGGCGTAAAAGGTATAACTCAAAAGACAGCCGAGGTCGGCTGGCAGCAAAGCGTCATATTACCGAAAGACCTGCAAAAGCTGAGC
ATCGAAAAGAGCCTGGTCACTGGGAGATTGATACCGTCGTTGGCCGCGGAACCAAGCACTGTATCGTGACTTTAGTTGACAGAATGACTGGCTACACTTT
TATTGGGCAAATGGACGATAGAACAAGCGAGTCGCTCAACGTAAGAATGAGCAAAATCATGACCCGCTCTGACTTACCTTTTAAGACGATAACTGCGGAT
AACGGCACTGAATTTCATGGTTATGCACAACTAGAAAAACATCATAACTGTCTGTTTTACTTTGCAAATCCATACCACTCATGGGAGCGAGGGACTAATG
AAAACACCAATGGTTTGATACGACAATACTTACCAAAACGAACTTCTATGTCACACGTGACACAGAAGCTCTGCAATGAAATTGCACACAAATTAAATAC
GCGCCCACGCAAAAGACTTGGGTATAGGACACCAACGGAGTATATTCATGCGCATCTGTAGAAAGTGTCGCACTTCAAACTTGATACTAAG
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
969 bp | 322 aa | 93 | 1061 | + | No |
Description :
ORF sequence :
MRYTHLTENERYMISALRKQGISTAKIAKQLGRHKATIYREIERNSRYNRHFKRYSYQAWRAQQMARNRLSRSRRNKRYSEIDFRLPEALLRLDWSPDQI
VGYLRVRGYPTMSHELIYQHIWNDKTLGGTLWKHLRQSTKKRRKRYNSKDSRGRLAAKRHITERPAKAEHRKEPGHWEIDTVVGRGTKHCIVTLVDRMTG
YTFIGQMDDRTSESLNVRMSKIMTRSDLPFKTITADNGTEFHGYAQLEKHHNCLFYFANPYHSWERGTNENTNGLIRQYLPKRTSMSHVTQKLCNEIAHK
LNTRPRKRLGYRTPTEYIHAHL
VGYLRVRGYPTMSHELIYQHIWNDKTLGGTLWKHLRQSTKKRRKRYNSKDSRGRLAAKRHITERPAKAEHRKEPGHWEIDTVVGRGTKHCIVTLVDRMTG
YTFIGQMDDRTSESLNVRMSKIMTRSDLPFKTITADNGTEFHGYAQLEKHHNCLFYFANPYHSWERGTNENTNGLIRQYLPKRTSMSHVTQKLCNEIAHK
LNTRPRKRLGYRTPTEYIHAHL
Blast result :
Comments
ISVa6 is 57% aa similar to ISAeca1.
References