ISDpr10
- Family ISKra4
- Group ISKra4
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NZ_ADZZ01000790.1 | ND | Delta proteobacterium | Delta proteobacterium NaphS2 |
DNA section
IS Length : 1682 bp
Ends
IR Length : 15
IRL : GAGTGTAACCTTTTTCGCTGAGCTGAACTTATTCTCTATAACCTATTGAA
IRR : GAGTGTAACCTTTTTTCGTCGGGATTCTATGCCGCTTTATTCTTGGAAAA
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
AAAATCAATC | AATTCATTCT | 0 |
DNA sequence
GAGTGTAACCTTTTTCGCTGAGCTGAACTTATTCTCTATAACCTATTGAAATTGTTTAAAATCAAATAGCTGGACATTCTCTCATTCGCGAATTAGACTA
TTGGTGAAAAAGAGTAGCCAATATCTTGAGCGGAGGGGAAAATGCCAGCGTATTCAATGGAAGAAAGTCTACTTGAAGGTCATGTGGAAGTCAAAAAACT
TTTTGAATTTGTTGAGGATAATGCTGCGTCTATGGACGCATACACGATGGAGCAGAACATCTTTTTCAAAATTCTTGCAATTGGTCTGTCTGCCATGAAA
GGCTATTTTGCTCAGAAAGGTACCGGAGACGTAGGAGCTTCCTTGGATTTGGAGGACGGAACCGTATTGAAAAGGCAAAAGTCGCCTTCTGACAGGAATT
ACTTTTCGGTTTTTGGCAAACTTTCGGTTCCGCGCACCTGCTATCGAGCAGATGGTGTTAATGGGGTAATGCCATTGGATGCTCAGGCAAATCTTCCTGA
AAGAAGCTACTCGTACCTTCTCCAAGAATGGATGGATCTTTTGAGCATTCGAGATTCTTTCGGAGAATCCTCTTGCACCCTGCAAAAACTGCTGAACTTG
AAAATACATCCGAGCCGTTATGAAGTTGTAAATCAGGAATCATCAAATAGCTACGATGAATTTTATGAGAGTAAGGAGCCTCCGAGTCCGGAAAGCGAAG
GCAGCGTTCAGGTAATTGGTTTCGATGGAAAAGGCGTTCCTGTCATCAAGCAAGAGGCTGCCAAGATACAGGCCCGGCTTGGAAAAGGAGAAAAGCGCCA
GAAAACAAAAGAAGCCATTGTAGGGGTCAGTTATACAGTTGATCCCAAGGTACGAACACCTCGTGAAGTTGCCGAAAATCTCGTTTATCCGGAAAAAAGC
AAAGAAGAAACAGATACCCCGAATAAACAAGATGTTAAGGCATCTCCCATACGCGCATCAAATCCTCGTCGAATAGCCAGTTTGGAACGATCCAAGAAAG
ACGTCATGATGGAAATTTTAAAGGATGCTAAAGTCAGGAACCCCGATAACCGAAAATCTCTTGTAGCGGTCATGGATGGTGCACTGTGCCTATGGTCTCT
ATTGAGCACCGTGTTGGCTGGTGTGAAATGGGTGGGTATTTTGGACATTATACATGTCGTAGAATACCTTTGGAAAGTGGCCAATTCCTTGTATGGTGAA
AACACCCGCGAAGGGAAAAAATGGGTATATGACCATCTGATGGCAATTTTGCAGGGCCGTGTTGGAAGAGTTATTGGAGGCATGAAACAGATTTTGAACA
AAAGAAAAAAGTTAAAGAGCGGTCAGAAAAAAGCCTTGAGAGAAACCATCAAGTATTTTGAAAATCACCGCCAATGGATGCGCTATGATGAGTACCTGGC
CTCTGGATATCCGATAGGAAGCGGCGTCGTAGAGTCCACTTGCGGACACACCGTTAAAAAGCGAATGGAAGGAACAGGTCGCAGGTGGTCAATTAAAGGT
GCCGAATCCACGCTGCTTTTGCGGTCCGTCTATACCAGCAATGATTGGGATGCTTACTGGGAGAACCATCGTCAGCAGGAGCAAAAGCGGCAATACGGCA
AAATCCTACCGCTTTTGGCATGCTCCGACGATTTTTCCAAGAATAAAGCGGCATAGAATCCCGACGAAAAAAGGTTACACTC
TTGGTGAAAAAGAGTAGCCAATATCTTGAGCGGAGGGGAAAATGCCAGCGTATTCAATGGAAGAAAGTCTACTTGAAGGTCATGTGGAAGTCAAAAAACT
TTTTGAATTTGTTGAGGATAATGCTGCGTCTATGGACGCATACACGATGGAGCAGAACATCTTTTTCAAAATTCTTGCAATTGGTCTGTCTGCCATGAAA
GGCTATTTTGCTCAGAAAGGTACCGGAGACGTAGGAGCTTCCTTGGATTTGGAGGACGGAACCGTATTGAAAAGGCAAAAGTCGCCTTCTGACAGGAATT
ACTTTTCGGTTTTTGGCAAACTTTCGGTTCCGCGCACCTGCTATCGAGCAGATGGTGTTAATGGGGTAATGCCATTGGATGCTCAGGCAAATCTTCCTGA
AAGAAGCTACTCGTACCTTCTCCAAGAATGGATGGATCTTTTGAGCATTCGAGATTCTTTCGGAGAATCCTCTTGCACCCTGCAAAAACTGCTGAACTTG
AAAATACATCCGAGCCGTTATGAAGTTGTAAATCAGGAATCATCAAATAGCTACGATGAATTTTATGAGAGTAAGGAGCCTCCGAGTCCGGAAAGCGAAG
GCAGCGTTCAGGTAATTGGTTTCGATGGAAAAGGCGTTCCTGTCATCAAGCAAGAGGCTGCCAAGATACAGGCCCGGCTTGGAAAAGGAGAAAAGCGCCA
GAAAACAAAAGAAGCCATTGTAGGGGTCAGTTATACAGTTGATCCCAAGGTACGAACACCTCGTGAAGTTGCCGAAAATCTCGTTTATCCGGAAAAAAGC
AAAGAAGAAACAGATACCCCGAATAAACAAGATGTTAAGGCATCTCCCATACGCGCATCAAATCCTCGTCGAATAGCCAGTTTGGAACGATCCAAGAAAG
ACGTCATGATGGAAATTTTAAAGGATGCTAAAGTCAGGAACCCCGATAACCGAAAATCTCTTGTAGCGGTCATGGATGGTGCACTGTGCCTATGGTCTCT
ATTGAGCACCGTGTTGGCTGGTGTGAAATGGGTGGGTATTTTGGACATTATACATGTCGTAGAATACCTTTGGAAAGTGGCCAATTCCTTGTATGGTGAA
AACACCCGCGAAGGGAAAAAATGGGTATATGACCATCTGATGGCAATTTTGCAGGGCCGTGTTGGAAGAGTTATTGGAGGCATGAAACAGATTTTGAACA
AAAGAAAAAAGTTAAAGAGCGGTCAGAAAAAAGCCTTGAGAGAAACCATCAAGTATTTTGAAAATCACCGCCAATGGATGCGCTATGATGAGTACCTGGC
CTCTGGATATCCGATAGGAAGCGGCGTCGTAGAGTCCACTTGCGGACACACCGTTAAAAAGCGAATGGAAGGAACAGGTCGCAGGTGGTCAATTAAAGGT
GCCGAATCCACGCTGCTTTTGCGGTCCGTCTATACCAGCAATGATTGGGATGCTTACTGGGAGAACCATCGTCAGCAGGAGCAAAAGCGGCAATACGGCA
AAATCCTACCGCTTTTGGCATGCTCCGACGATTTTTCCAAGAATAAAGCGGCATAGAATCCCGACGAAAAAAGGTTACACTC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1515 bp | 504 aa | 142 | 1656 | + | No |
Chemistry : DDE
ORF sequence :
MPAYSMEESLLEGHVEVKKLFEFVEDNAASMDAYTMEQNIFFKILAIGLSAMKGYFAQKGTGDVGASLDLEDGTVLKRQKSPSDRNYFSVFGKLSVPRTC
YRADGVNGVMPLDAQANLPERSYSYLLQEWMDLLSIRDSFGESSCTLQKLLNLKIHPSRYEVVNQESSNSYDEFYESKEPPSPESEGSVQVIGFDGKGVP
VIKQEAAKIQARLGKGEKRQKTKEAIVGVSYTVDPKVRTPREVAENLVYPEKSKEETDTPNKQDVKASPIRASNPRRIASLERSKKDVMMEILKDAKVRN
PDNRKSLVAVMDGALCLWSLLSTVLAGVKWVGILDIIHVVEYLWKVANSLYGENTREGKKWVYDHLMAILQGRVGRVIGGMKQILNKRKKLKSGQKKALR
ETIKYFENHRQWMRYDEYLASGYPIGSGVVESTCGHTVKKRMEGTGRRWSIKGAESTLLLRSVYTSNDWDAYWENHRQQEQKRQYGKILPLLACSDDFSK
NKAA
YRADGVNGVMPLDAQANLPERSYSYLLQEWMDLLSIRDSFGESSCTLQKLLNLKIHPSRYEVVNQESSNSYDEFYESKEPPSPESEGSVQVIGFDGKGVP
VIKQEAAKIQARLGKGEKRQKTKEAIVGVSYTVDPKVRTPREVAENLVYPEKSKEETDTPNKQDVKASPIRASNPRRIASLERSKKDVMMEILKDAKVRN
PDNRKSLVAVMDGALCLWSLLSTVLAGVKWVGILDIIHVVEYLWKVANSLYGENTREGKKWVYDHLMAILQGRVGRVIGGMKQILNKRKKLKSGQKKALR
ETIKYFENHRQWMRYDEYLASGYPIGSGVVESTCGHTVKKRMEGTGRRWSIKGAESTLLLRSVYTSNDWDAYWENHRQQEQKRQYGKILPLLACSDDFSK
NKAA
Blast result :
Comments
ISDpr10 is 41% aa similar to ISSiac4.
References