ISMoth2
- Family ISLre2
- Group
Isoform Synonym(s)
| Accession number | Transposition | Origin | Host |
|---|---|---|---|
| NC_007644 | ND | Moorella thermoacetica | Moorella thermoacetica ATCC 39073 |
DNA section
IS Length : 1723 bp
Ends
IR Length : 15/24
IRL : GTTAGTGTAAAATTACAGTAGGTAGGAGGAAAAAGGGGTAAAAAAGAGAA
IRR : GTACGTGTCAAGATGTAGTAGGCAAAAAGAGACCCCACATAAAAATCCCA
Insertion site
| Left flank | Direct repeat | Right flank | DR Length |
|---|---|---|---|
| CAAGCAAATA | AATTTTTTG | TCTACCAGGG | 9 |
| AAATCGTAGG | AGCCAGAGG | AAGAGCTTTG | 9 |
DNA sequence
GTTAGTGTAAAATTACAGTAGGTAGGAGGAAAAAGGGGTAAAAAAGAGAAAAGAGACCTCACAGGAAGAAAACCACCGTAAAAGGAGTGAGGTCTCTTAA
TGGTAAACGGTAGTACCAGTACCGCTACCATCATTAGTTTATTAGATGGTATCGAGAATTTCAACACTCTTGAAGAAGTTATCCTGCAAATAGCCAGGAG
GTTATTGGTAGCCGTACTGGAAGCCCTGGATGATACCCTTATGCCGGCAAAACCTAAGGGATATAAGATAGCTGGGTTCCGCTACCGCACAATCACCTGC
CTGTACGGGGATATAACCTTTAAGCGCCGGCTATATGTTAAAGCAACGCGCAAAAAGAAAAGAGGGGAAGGAAGGTTTCTATTAGACGAAGCCCTAAACT
TACGCCAAGGAAAGCGTCTGACAGGAAGACTGCTCAAATTAGCCGTATCGCTGGCAACCCGGTTACCCTTCAGGCAGGCAGCGGAAATAATGGCCGAAGC
AGGGATGGGCCAATTAAGTCATATGACCATCCATAGCGAAGTAAAACGAAATGGACTGGAACAAAAAGAACTGCAAGAAGCCCTGCGCAATAATCTATTC
ATGAGCGGGGAAGAGCCCCAAGGCAAAAAGAAAAAAGTACCGGTACTATTTATCGAAGCCGATGGTATAATGATCCCGCTGCAAAGGAGCAAGCAAGACC
GGATAGAAGTCAAAGTAGGAATAGTTTACGAAGGGTGGATAGAAAAAGGGAATGCCCGGCATCTCAAGAACCCGCGGGTAGTGATGGGCATCTATGAAGA
TGGAGAACAATTTTGGGAAGCCCTCACCACGGAAATAGCCAGGTACTACGAGATAGACGAAAAAACAATATATGTCGTCAATGGCGACGGAGCCAGCTGG
GTCCAGAAGACAGCCAAAGAACAGTTACCAGGAGCCATCGTACAATTAGACCGCTACCACCTCCACCGGGATATAAGGCAGGCATATGGGAACGAAACAG
CGCAGGGATTAATGAAGACTTTAGCCAAAGGTCAAGAGCAGGTCTTTTTAGACACCCTGGAAGCACTCATAGAAGAAGCACCGAACCGCAAAAACAAGCA
ACAATGCCAAAAAGTATATGACTACTGTCAAAGATATCGCGATAACTTGTTAGATTACCGCTTGCGGTTACCACGACAGCTGGAAGGGCAAAAGTTATAC
GGGATGGGCGTAGCCGAAACAACAGTAGACAAAAAAATAGCCATCCGCATGAAAAAGAGGGGGATGAGCTGGAGCGAAGCAGGAGCAACGGCCATGGTAG
CATTACTAATGCTCAAAGCCAATGGAGAATTAGCCGCATGGTTAGAAAAAAAGATGCCCCAAGTAGAAAAGAATCCCGTTAAAGTAATAAAAGAAAAGAA
GATAAGTAAAGAAGACGTAGAAGAATGGTTAAGGAAGAGAGTACCAGCCCTTGTTGGCCCTGAGGCGGGAACAGATTGGGTTAAATATACCATGAGGCAA
CTAACAAGAATTAGTGGAGCTATATTCTAACCCCTTTTCTGGCTTAATTAGAGCAGGCAGTAATTCGCGAAGCCTGTCAAGGTCGCCGTAGGCGGCCGCA
GGCTTTAACGTTGACAGGCGCAGCGAATTACTGCACAATACTCCGGAGCCGGAAAAGGTGCTGGATATATATGGGATTTTTATGTGGGGTCTCTTTTTGC
CTACTACATCTTGACACGTAC
TGGTAAACGGTAGTACCAGTACCGCTACCATCATTAGTTTATTAGATGGTATCGAGAATTTCAACACTCTTGAAGAAGTTATCCTGCAAATAGCCAGGAG
GTTATTGGTAGCCGTACTGGAAGCCCTGGATGATACCCTTATGCCGGCAAAACCTAAGGGATATAAGATAGCTGGGTTCCGCTACCGCACAATCACCTGC
CTGTACGGGGATATAACCTTTAAGCGCCGGCTATATGTTAAAGCAACGCGCAAAAAGAAAAGAGGGGAAGGAAGGTTTCTATTAGACGAAGCCCTAAACT
TACGCCAAGGAAAGCGTCTGACAGGAAGACTGCTCAAATTAGCCGTATCGCTGGCAACCCGGTTACCCTTCAGGCAGGCAGCGGAAATAATGGCCGAAGC
AGGGATGGGCCAATTAAGTCATATGACCATCCATAGCGAAGTAAAACGAAATGGACTGGAACAAAAAGAACTGCAAGAAGCCCTGCGCAATAATCTATTC
ATGAGCGGGGAAGAGCCCCAAGGCAAAAAGAAAAAAGTACCGGTACTATTTATCGAAGCCGATGGTATAATGATCCCGCTGCAAAGGAGCAAGCAAGACC
GGATAGAAGTCAAAGTAGGAATAGTTTACGAAGGGTGGATAGAAAAAGGGAATGCCCGGCATCTCAAGAACCCGCGGGTAGTGATGGGCATCTATGAAGA
TGGAGAACAATTTTGGGAAGCCCTCACCACGGAAATAGCCAGGTACTACGAGATAGACGAAAAAACAATATATGTCGTCAATGGCGACGGAGCCAGCTGG
GTCCAGAAGACAGCCAAAGAACAGTTACCAGGAGCCATCGTACAATTAGACCGCTACCACCTCCACCGGGATATAAGGCAGGCATATGGGAACGAAACAG
CGCAGGGATTAATGAAGACTTTAGCCAAAGGTCAAGAGCAGGTCTTTTTAGACACCCTGGAAGCACTCATAGAAGAAGCACCGAACCGCAAAAACAAGCA
ACAATGCCAAAAAGTATATGACTACTGTCAAAGATATCGCGATAACTTGTTAGATTACCGCTTGCGGTTACCACGACAGCTGGAAGGGCAAAAGTTATAC
GGGATGGGCGTAGCCGAAACAACAGTAGACAAAAAAATAGCCATCCGCATGAAAAAGAGGGGGATGAGCTGGAGCGAAGCAGGAGCAACGGCCATGGTAG
CATTACTAATGCTCAAAGCCAATGGAGAATTAGCCGCATGGTTAGAAAAAAAGATGCCCCAAGTAGAAAAGAATCCCGTTAAAGTAATAAAAGAAAAGAA
GATAAGTAAAGAAGACGTAGAAGAATGGTTAAGGAAGAGAGTACCAGCCCTTGTTGGCCCTGAGGCGGGAACAGATTGGGTTAAATATACCATGAGGCAA
CTAACAAGAATTAGTGGAGCTATATTCTAACCCCTTTTCTGGCTTAATTAGAGCAGGCAGTAATTCGCGAAGCCTGTCAAGGTCGCCGTAGGCGGCCGCA
GGCTTTAACGTTGACAGGCGCAGCGAATTACTGCACAATACTCCGGAGCCGGAAAAGGTGCTGGATATATATGGGATTTTTATGTGGGGTCTCTTTTTGC
CTACTACATCTTGACACGTAC
Protein section
ORF number : 1
ORF 1
| Length | Begin | End | Strand | Fusion ORF | |
|---|---|---|---|---|---|
| 1431 bp | 476 aa | 101 | 1531 | + | No |
Chemistry : DDE
ORF sequence :
MVNGSTSTATIISLLDGIENFNTLEEVILQIARRLLVAVLEALDDTLMPAKPKGYKIAGFRYRTITCLYGDITFKRRLYVKATRKKKRGEGRFLLDEALN
LRQGKRLTGRLLKLAVSLATRLPFRQAAEIMAEAGMGQLSHMTIHSEVKRNGLEQKELQEALRNNLFMSGEEPQGKKKKVPVLFIEADGIMIPLQRSKQD
RIEVKVGIVYEGWIEKGNARHLKNPRVVMGIYEDGEQFWEALTTEIARYYEIDEKTIYVVNGDGASWVQKTAKEQLPGAIVQLDRYHLHRDIRQAYGNET
AQGLMKTLAKGQEQVFLDTLEALIEEAPNRKNKQQCQKVYDYCQRYRDNLLDYRLRLPRQLEGQKLYGMGVAETTVDKKIAIRMKKRGMSWSEAGATAMV
ALLMLKANGELAAWLEKKMPQVEKNPVKVIKEKKISKEDVEEWLRKRVPALVGPEAGTDWVKYTMRQLTRISGAIF
LRQGKRLTGRLLKLAVSLATRLPFRQAAEIMAEAGMGQLSHMTIHSEVKRNGLEQKELQEALRNNLFMSGEEPQGKKKKVPVLFIEADGIMIPLQRSKQD
RIEVKVGIVYEGWIEKGNARHLKNPRVVMGIYEDGEQFWEALTTEIARYYEIDEKTIYVVNGDGASWVQKTAKEQLPGAIVQLDRYHLHRDIRQAYGNET
AQGLMKTLAKGQEQVFLDTLEALIEEAPNRKNKQQCQKVYDYCQRYRDNLLDYRLRLPRQLEGQKLYGMGVAETTVDKKIAIRMKKRGMSWSEAGATAMV
ALLMLKANGELAAWLEKKMPQVEKNPVKVIKEKKISKEDVEEWLRKRVPALVGPEAGTDWVKYTMRQLTRISGAIF
Blast result :
Comments
ISMoth2 is 65% aa similar to ISHor2.
References
1] ISfinder annotation (2013)
2] Pierce,E., Xie,G., Barabote,R.D., Saunders,E., Han,C.S., Detter,J.C., Richardson,P., Brettin,T.S., Das,A., Ljungdahl,L.G. and Ragsdale,S.W. (2008) Environ. Microbiol. 10 (10), 2550-2573.
2] Pierce,E., Xie,G., Barabote,R.D., Saunders,E., Han,C.S., Detter,J.C., Richardson,P., Brettin,T.S., Das,A., Ljungdahl,L.G. and Ragsdale,S.W. (2008) Environ. Microbiol. 10 (10), 2550-2573.