ISWosp7

  • Family IS4
  • Group IS231
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
ND Wolbachia sp.
Wolbachia sp.
DNA section
IS Length : 1448 bp

Ends


IR Length : 23/26

IRL : CATACGCGTCAAGTTAAGGAACTGTGGTAATAAACTTAGTGTAAGGAAGA
IRR : CATACGCGTCAAGTTAAGAGATTGTGAGCAAATTTAGAGAAGTTAAGGTG

Insertion site


Left flankDirect repeatRight flankDR Length
GTTTGACACATTTGTTTAAACTCCCTATC9

DNA sequence

CATACGCGTCAAGTTAAGGAACTGTGGTAATAAACTTAGTGTAAGGAAGAGAAAAAAAAGATATAAGTTCTCTTAAATCTAACAAAGAAAACGGAGAACT
TATACAATGAAAAGAATAGTTTGCATCTCAAAAAAGCTCAAAGAATTTTTTAATGAAAAAGCAGATAAAATCTCAGCTACAACAGGGTTCATAAAAAGAA
AGAGGAAGCTAAAAGGCTCGTCGTTCATAAAAGCCATCGTTTTGGGTAATATAGGGGTTGATAATTGTAGTATAGAGACAGTGTGTCAATTATTGAATGA
AGACTCGATAAATATAACAAAACAAGGTCTGGACTTTAGATTTACCAAGGAAGCAGTGGAATTTATGAAAAGAATGTATAATGAATCTTTAACGTTACTT
AAAAATACCTTACAAGTTGATTGCAGAATCTTGAAGCACTTTGGAGGTGTTAAATTATTAGACAGCAGCTACATTAGCTTACCTAACAGTATGGAAGACA
TGTATAAAGGTTATGGTACCAGCTACAGTGGTTATGAAAGCAATACTAAGTCTAGAATAAAGTTACAATTAGTTTTTGACTACCTAAACCAGACATTAGA
CCAGCTTAATATAACTGAAGGAATAAGGTCAGATCAGGGTTATAGAAGCCATTTAAGCAATATATCGAACAACGATTTACTAATATCTGATTTGGGTTAT
TCTGTGCCAAGTTCTTTTAAACAAATCAATGAAATAGGAGCTTATTTCATAAGTCGTTATAAATCCGATATTAACATATATGATATAGAGACAGGTCAAA
AAATAGATTTACTAGAACATTTGGGAGATCGATCTTTTCTAGAACAGGAGGTATTGTTAGGAAAAGAGACAAGGGTTAAAGTAAGAATTATATTTAAAAA
ACTAACTGAAGAACAAGCTATGGCTAGAAGAAGAAAGGCTAATAGGTTAGCAAGATCACATGGATACACATCTTCTCAAAGGAACCAAAAGTTACTAAAT
TGGTCGATATTTATAACTAATGTTCCAAAAAGTAAGATTAATGCTGAGCAAATACTAGTAGTTTACCGAATAAGATGGCAAATTGAATTATTGTTCAAAT
TATATAAGAGTAATATAAGGCTTGATAAGCTGAGAGGAATGCCATACAGAGTATTATGTGAGCTATATGCCAAATTGTGTGCAATTCTTATATTTCATGG
AGTAGTGGGTTGCACAGAACTGAAAAAAAATACGGAGCTTAGCTTAACAAAGGCATTTATTGAGCTAAAAAGACGGGTTAGAGAGTTATTTTTAGCACTA
AATAATAAAACTAAAGGCTTAAATATTTTTCTCAAAAAGCTTACCATAACTTGGTCGCAGTTTTCATTAAAAGACAAGTACAGAGAAACTAGGGTATCCA
CCTTAACTTCTCTAAATTTGCTCACAATCTCTTAACTTGACGCGTATG
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1329 bp442 aa1071435+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MKRIVCISKKLKEFFNEKADKISATTGFIKRKRKLKGSSFIKAIVLGNIGVDNCSIETVCQLLNEDSINITKQGLDFRFTKEAVEFMKRMYNESLTLLKN
TLQVDCRILKHFGGVKLLDSSYISLPNSMEDMYKGYGTSYSGYESNTKSRIKLQLVFDYLNQTLDQLNITEGIRSDQGYRSHLSNISNNDLLISDLGYSV
PSSFKQINEIGAYFISRYKSDINIYDIETGQKIDLLEHLGDRSFLEQEVLLGKETRVKVRIIFKKLTEEQAMARRRKANRLARSHGYTSSQRNQKLLNWS
IFITNVPKSKINAEQILVVYRIRWQIELLFKLYKSNIRLDKLRGMPYRVLCELYAKLCAILIFHGVVGCTELKKNTELSLTKAFIELKRRVRELFLALNN
KTKGLNIFLKKLTITWSQFSLKDKYRETRVSTLTSLNLLTIS

 

Blast result :
Comments
ISWosp7 is 92% aa similar to ISWen1.
References
1] Mingxing Jiang (2012) Direct submission to ISfinder