ISWosp8

  • Family IS4
  • Group IS4
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
ND Wolbachia sp.
Wolbachia sp.
DNA section
IS Length : 1462 bp

Ends


IR Length : 17

IRL : ATACGCGTCAAGTTAAGGAAAAATGTCAGTGATTGTGTATAAAATTTCTC
IRR : ATACGCGTCAAGTTAAGAGCCTCAATTAACAAACTCTCCTAAAGACATGA

Insertion site


Left flankDirect repeatRight flankDR Length

DNA sequence

ATACGCGTCAAGTTAAGGAAAAATGTCAGTGATTGTGTATAAAATTTCTCACTAAAATTTTTACCATTAAATTATCCAAAAGCTGCAATAAACAGCACTA
TTGCTTCTATTTTATTTCAACAAAAGAGTCTAAAATGTGTCCTTTTTAGGTGAAACATGCAAAAAGGAAAAAATCTTATTCTACAAATTAAAAATATAAT
ATACTCGAAAACTTTTCAGAGAATTCATTGTGTTGGAAAAAACAGTTTCACGCGAACAAGAAAACTCCCTTTTACGACAGTATTTTCTATGATTTTAAAG
TTAGTAAAAAAAAGTTTGGGAATAGAATGTGAACTTATGGATCCATTGACTTGTAAAGTTCCGCCATCAAAGCAAGCCTTTTCTAAAGCAAGGTATAAGA
TTTGTCACACAGGTTTTAAAGAATTGTTGGAGCTAAGCATCCAAACAGCCTATCAAGATGAACCTGAGTATGGAACCTGGAGAGGCTATAGACTTATTGC
AGCAGATGGTTCTGGTATGAGATTACCCAGCTCTGAGGAAATTGTATCCAAGTTTGGCCGTTTTAAACCAAATGGAACAACAGGTACAATGCCACCATTG
GCAAGAGTTTTTTTGTTTGTTGATTTGTGTACTTCGCTGATTTGCAGTGCTCGTATTGCGGCTTGGAATATAGGAGAACAAACGTTGGCGGAAGAGCAAT
TATCCGAAGTTGTCACTCAAATGCGTTCATTAAATCAAGAGAGATTATTATTTATCTATGATCGTGGTTATCCTTCAGTAAAATTCATTCAGCAGCATTA
TGATTTGGAAGTAGATTTTATTTTTCGCTTGCAAAAAAGAAATTATAGCAAGCTATGGGAACGAATTTTGTCTGGCGAATTGGATTTTGATTTTATATTA
GAAAACGAAAAGCTAAAAAGTAAAATGAAAGGACAGAAAGTAAGAGTTATAGTGCTGACATTAGCCAACGGAGAAACAGAGGTATTGGTTACTTCACTTT
TTGATCGAGAAAAATTTACTTTGGAAGATATAAGCAAAGCTTATGTGTTAAGGTGGCACATAGAGGAGTGCTATAAACGACTCAAAGTAGGAGCAGAATT
AGAGAATTTTTCTGGGGTAAATTTAGAAGCTGTATTACAAGAATTTTGGGCGAACTTGGTCATGTGCAATATATTATCGCTTCATATGTGTGATGCACAA
GGGCCTTGGAACCCAGATCAAATTGCTGAGTATCGTTTAAATTTTTCAGTTTTATTTGGTGTAATGAGACAGAAACTCTATCAAGTACTTATTGGAATTT
GTTCACCAAAAAGCTTTCAAACCCTTTTTGATAGAGCAAGTATACGCGCTAAAGTGAAAATTCGACCAGGGCGATTGTATAGCCGCAATAAGGTAGATAA
GCCCAAACGCCATCATGTCTTTAGGAGAGTTTGTTAATTGAGGCTCTTAACTTGACGCGTAT
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1281 bp426 aa1571437+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MQKGKNLILQIKNIIYSKTFQRIHCVGKNSFTRTRKLPFTTVFSMILKLVKKSLGIECELMDPLTCKVPPSKQAFSKARYKICHTGFKELLELSIQTAYQ
DEPEYGTWRGYRLIAADGSGMRLPSSEEIVSKFGRFKPNGTTGTMPPLARVFLFVDLCTSLICSARIAAWNIGEQTLAEEQLSEVVTQMRSLNQERLLFI
YDRGYPSVKFIQQHYDLEVDFIFRLQKRNYSKLWERILSGELDFDFILENEKLKSKMKGQKVRVIVLTLANGETEVLVTSLFDREKFTLEDISKAYVLRW
HIEECYKRLKVGAELENFSGVNLEAVLQEFWANLVMCNILSLHMCDAQGPWNPDQIAEYRLNFSVLFGVMRQKLYQVLIGICSPKSFQTLFDRASIRAKV
KIRPGRLYSRNKVDKPKRHHVFRRVC

 

Blast result :
Comments
ISWosp8 is 44% aa similar to ISHch2.
References
1] Mingxing Jiang (2012) Direct submission to ISfinder