ISSaci1
- Family ISAzo13
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NZ_AHBF01000036 | ND | Streptomyces acidiscabies | Streptomyces acidiscabies 84-104 |
DNA section
IS Length : 1747 bp
Ends
IR Length : 20/21
IRL : GGACCTGCCGATCAATAACTCTTCGGTTTTTGTGGGCTGTTGGGTTGTAG
IRR : GGACCTGCCGATCAATAATTCCTAGATCTTGGTGAGGATTATGGGGGTGT
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
GATGAACCAG | ATGGGCCCCG | 0 |
DNA sequence
GGACCTGCCGATCAATAACTCTTCGGTTTTTGTGGGCTGTTGGGTTGTAGGGTGCGGGGGTGTCGGAGGGGACGAAGGCAGAGCTGGTGGACGTGTTGGG
GCTGTTGCTGCCGCATCTCGATGAGCGCCAGCAGCGCCTGACGCTGGGTGCCGTGGCCCGCGTTCTGGGCCACGGCGGGATCCGCGTGGTGGCCGGAGCG
GCCGGGGTGGCGGAGTCCACGGTGTCGCGTGGGAAGCGGGAGCTGGAGCACGCGGAGGAGCCCGCCGGCCGGGTCCGGGCACCGGGCGCGGGTCGGAAGC
CCTTGCGGGAGGCCGATCCGGGGCTGGTGCCCGCGTTGCTGGCGCTGGTCGAGCCGGACCAGCGGGGTGACCCGGAGTCTCCGCTGCTGTGGACGGTGAA
GTCCACCCGGAATCTGGCGGGCGAGCTGACGCGTCAGGGGCACCGGGTCGGTTCGGACACGGTGGCTACGCTGTTGAAGGCGGAGGGCTTCTCTCTGCAG
GGCACCTCCAGGACCACCGAGGGGGCCCGGCATCCGGACCGGGACGCCCAGTTCCGCTACATCAACGACCAGGTCACGGCGTACCTCGCCGAGGGGCAGC
CGGTCATCAGCGTGGATGCCAAGAAGAAGGAGACGCTGGGCAGCTACGCGGTGATCGGACGCGAGTGGCACCGCGCCGGACAGCCGGTGCAGGTCCGCGC
ACACGACTTCCCCGAGAAGGGCGCCCAGAAAGCGGTGCCGTACGGGATCTACGACATAGGCGCGGATACCGGCTGGGTGTCGGTGGGCTGCGACGGGGAC
ACCTCTGCCTTCGCGGTGGCCACTTTGCGCCGCTGGTGGAACGGTGAGGGGCGCCGCCGCTACCCGCACGCGTCCCGCCTGCTGGTCACCGCCGACGCCG
GAGGCTCCAACGGCTACCGTGTGCGCGCCTGGAAGAAGGAACTCGCGGACTTCGCCTACGAGACAGGCCTTGAAGTGACTGTCTGTCACTTTCCACCGGG
AACATCGAAGTGGAACAAAATAGAGCACAGGCTGTTCTCACAGATCAGCGTCAACTGGCGTGGCAGGCCCCTGACCAGCCACGAAGTCGTCGTCAGCACC
ATCGGAGCGACCACGACACGCAGCGGACCGTCCGTCCACGCCGAGCTCGACCCCGGCGTCTACCCCACCGGCGTCACCGTCCCCGACACCGTCATGGAAC
GCCTGCCCCTGACGCCGCACGAGTGGCACGGCACGTGGAACTACACCCTGCGCCCCGAACCGCTCGCTCCTGAATTGTCCCCACCCAGCGCCGGGTTCGG
GCGCTTTCCCACCGGCGACAAGCTCCCCATGTGGCTGCGGCACCCCAGCCTCACCGGACTCGAACCCGCCGCCTTCGGCGATCTCGCCGCCCGTTACCAA
GCCTGGTGTGCCGAGCACCCGCCGATCTTCCTGCCCGGCAAACGCCCCGACGGCGGCCCCGGCGCCGGCAGCGGACGACTCTCCGTCGCCGACCAGCTTG
TCGTCTTCCTCCTCACGAAGCGCTGGTCCATGGCCCGGACGCCACTCGCCGAGGCAACCGGCCTGGCCAAGAGCCGGATCGGCGCGACCCTCCGGGAGGC
CACCCCCGTGCTCACCGCGCTGGGGTACACGGTCCCGGTCGGCGCCCTCACCGTGACCACGGCACAACAGCTCGCCGAGATCGCCGGGCACGACCTCACA
CCCCCATAATCCTCACCAAGATCTAGGAATTATTGATCGGCAGGTCC
GCTGTTGCTGCCGCATCTCGATGAGCGCCAGCAGCGCCTGACGCTGGGTGCCGTGGCCCGCGTTCTGGGCCACGGCGGGATCCGCGTGGTGGCCGGAGCG
GCCGGGGTGGCGGAGTCCACGGTGTCGCGTGGGAAGCGGGAGCTGGAGCACGCGGAGGAGCCCGCCGGCCGGGTCCGGGCACCGGGCGCGGGTCGGAAGC
CCTTGCGGGAGGCCGATCCGGGGCTGGTGCCCGCGTTGCTGGCGCTGGTCGAGCCGGACCAGCGGGGTGACCCGGAGTCTCCGCTGCTGTGGACGGTGAA
GTCCACCCGGAATCTGGCGGGCGAGCTGACGCGTCAGGGGCACCGGGTCGGTTCGGACACGGTGGCTACGCTGTTGAAGGCGGAGGGCTTCTCTCTGCAG
GGCACCTCCAGGACCACCGAGGGGGCCCGGCATCCGGACCGGGACGCCCAGTTCCGCTACATCAACGACCAGGTCACGGCGTACCTCGCCGAGGGGCAGC
CGGTCATCAGCGTGGATGCCAAGAAGAAGGAGACGCTGGGCAGCTACGCGGTGATCGGACGCGAGTGGCACCGCGCCGGACAGCCGGTGCAGGTCCGCGC
ACACGACTTCCCCGAGAAGGGCGCCCAGAAAGCGGTGCCGTACGGGATCTACGACATAGGCGCGGATACCGGCTGGGTGTCGGTGGGCTGCGACGGGGAC
ACCTCTGCCTTCGCGGTGGCCACTTTGCGCCGCTGGTGGAACGGTGAGGGGCGCCGCCGCTACCCGCACGCGTCCCGCCTGCTGGTCACCGCCGACGCCG
GAGGCTCCAACGGCTACCGTGTGCGCGCCTGGAAGAAGGAACTCGCGGACTTCGCCTACGAGACAGGCCTTGAAGTGACTGTCTGTCACTTTCCACCGGG
AACATCGAAGTGGAACAAAATAGAGCACAGGCTGTTCTCACAGATCAGCGTCAACTGGCGTGGCAGGCCCCTGACCAGCCACGAAGTCGTCGTCAGCACC
ATCGGAGCGACCACGACACGCAGCGGACCGTCCGTCCACGCCGAGCTCGACCCCGGCGTCTACCCCACCGGCGTCACCGTCCCCGACACCGTCATGGAAC
GCCTGCCCCTGACGCCGCACGAGTGGCACGGCACGTGGAACTACACCCTGCGCCCCGAACCGCTCGCTCCTGAATTGTCCCCACCCAGCGCCGGGTTCGG
GCGCTTTCCCACCGGCGACAAGCTCCCCATGTGGCTGCGGCACCCCAGCCTCACCGGACTCGAACCCGCCGCCTTCGGCGATCTCGCCGCCCGTTACCAA
GCCTGGTGTGCCGAGCACCCGCCGATCTTCCTGCCCGGCAAACGCCCCGACGGCGGCCCCGGCGCCGGCAGCGGACGACTCTCCGTCGCCGACCAGCTTG
TCGTCTTCCTCCTCACGAAGCGCTGGTCCATGGCCCGGACGCCACTCGCCGAGGCAACCGGCCTGGCCAAGAGCCGGATCGGCGCGACCCTCCGGGAGGC
CACCCCCGTGCTCACCGCGCTGGGGTACACGGTCCCGGTCGGCGCCCTCACCGTGACCACGGCACAACAGCTCGCCGAGATCGCCGGGCACGACCTCACA
CCCCCATAATCCTCACCAAGATCTAGGAATTATTGATCGGCAGGTCC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1623 bp | 540 aa | 87 | 1709 | + | No |
Chemistry : Unknow
ORF sequence :
MDVLGLLLPHLDERQQRLTLGAVARVLGHGGIRVVAGAAGVAESTVSRGKRELEHAEEPAGRVRAPGAGRKPLREADPGLVPALLALVEPDQRGDPESPL
LWTVKSTRNLAGELTRQGHRVGSDTVATLLKAEGFSLQGTSRTTEGARHPDRDAQFRYINDQVTAYLAEGQPVISVDAKKKETLGSYAVIGREWHRAGQP
VQVRAHDFPEKGAQKAVPYGIYDIGADTGWVSVGCDGDTSAFAVATLRRWWNGEGRRRYPHASRLLVTADAGGSNGYRVRAWKKELADFAYETGLEVTVC
HFPPGTSKWNKIEHRLFSQISVNWRGRPLTSHEVVVSTIGATTTRSGPSVHAELDPGVYPTGVTVPDTVMERLPLTPHEWHGTWNYTLRPEPLAPELSPP
SAGFGRFPTGDKLPMWLRHPSLTGLEPAAFGDLAARYQAWCAEHPPIFLPGKRPDGGPGAGSGRLSVADQLVVFLLTKRWSMARTPLAEATGLAKSRIGA
TLREATPVLTALGYTVPVGALTVTTAQQLAEIAGHDLTPP
LWTVKSTRNLAGELTRQGHRVGSDTVATLLKAEGFSLQGTSRTTEGARHPDRDAQFRYINDQVTAYLAEGQPVISVDAKKKETLGSYAVIGREWHRAGQP
VQVRAHDFPEKGAQKAVPYGIYDIGADTGWVSVGCDGDTSAFAVATLRRWWNGEGRRRYPHASRLLVTADAGGSNGYRVRAWKKELADFAYETGLEVTVC
HFPPGTSKWNKIEHRLFSQISVNWRGRPLTSHEVVVSTIGATTTRSGPSVHAELDPGVYPTGVTVPDTVMERLPLTPHEWHGTWNYTLRPEPLAPELSPP
SAGFGRFPTGDKLPMWLRHPSLTGLEPAAFGDLAARYQAWCAEHPPIFLPGKRPDGGPGAGSGRLSVADQLVVFLLTKRWSMARTPLAEATGLAKSRIGA
TLREATPVLTALGYTVPVGALTVTTAQQLAEIAGHDLTPP
Blast result :
Comments
ISSaci1 is 74% aa similar to ISFsp12.
References
1] ISfinder annotation (2013)
2] Huguet-Tapia,J.C. and Loria,R. (2012) J. Bacteriol. 194 (7), 1847.
2] Huguet-Tapia,J.C. and Loria,R. (2012) J. Bacteriol. 194 (7), 1847.