ISGte1

  • Family IS256
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
NZ_BAFD01000106.1 ND Gordonia terrae
Gordonia terrae NBRC 100016
DNA section
IS Length : 1503 bp

Ends


IR Length : 23/29

IRL : GGGGGTGTCAGATGGTCTGTGTAAGTCCAGTGCTCATCAGTGAGAGGACA
IRR : GAGCTTGTCAAGATGTCTGTGTAAGACCGTGACTCCTGGGTTTCCTGTAG

Insertion site


Left flankDirect repeatRight flankDR Length
GACGCGCAGTGGGTGATGACGTCCACGA8

DNA sequence

GGGGGTGTCAGATGGTCTGTGTAAGTCCAGTGCTCATCAGTGAGAGGACAATCTATGAGCATGGCGTTAGACGACAAACAGCAGAGCGACGACCAGCAGC
TGTCTGAGCTGGCCGAGCCGCGTTCGACCGCGGAGGTAGCCGAGGCGCTGCAGGCCTCGGGCATGGTCGATGAGTTGCTGGCCCAGATTGATACCGGCCA
GGTCCAGATCACCGGCGACGGCGGCCTGATTCCGGGTTTGATCAAACTCGCCCTCGAACGCGGTCTGAAGGCCGAGCTGACTGATCACCTCGGTTATGAG
AAGGGCGATCCGGCCGGTCGGGAACTGCCCAACGCCCGCAACGGGTCGAGCCCGAAAACGGTGCAGTCCGAGGCCGGGCCGGTCGAGCTGAACGTCCCTC
GAGACCGTGCCGGCACCTTCACCCCACGCCTGGTCCCGAAAGGCTCGCGCCGGCTCGGCGGCCTCGATGACATGATCATCTCGCTCTATGCCGGAGGCAT
GACGTTACGCGACATCCAGCATCACTTAGCCTCGACGATCGGCACAGATCTATCCCACGAGACGATCTCCAAGATCTGCGACGAGGTCCTCGACGCGGTC
GATGAATGGCAGAACCGGCCGCTGGAAGCCTTGTATCCCGTCATCTACCTCGACGCCCTGGTGGTAAAAGTCAAAGACGGCGCTCACGTCCGAAACAAGC
ACGCCCACATCGCTATTGGCGTCGACATGACCGGCGTCAAGCACGTCCTGGGTATTTGGATACAAGCCGAGGAAGGCGCGAAGTTCTGGGCCGGGGTGTG
TGCAAATCTGGCCAACCGCGGCGTACGTGACGTGCTCATCGTGTGCTGCGACGGGCTGACCGGATTCCCCGAGGCGATCGAGACGACCTGGCCACTGGCC
ACGGTGCAGACCTGCGTGGTGCATCTGATCCGCAACTCGATGCGGTTCGTGAACTACAAGGACCGCAAAGACGTGGCGCGGGCGATCAAACCGATATACA
CCGCCCCCGACGCCGAGACCGCCCGCCGCGAATGGGAGGCCTTCCGAGACTCCGAGTTAGGACTCAAATACCCGAGTGCGGCAGCAGCTTTCGATCGAGC
GTGGGACCGGTTCATTCCGTTCTTGGCGTTCCCGCCCGAGCTCCGCAAGGTCATCTACACCACCAACTCGATCGAGTCGCTGAACTATCAGCTCCGCAAG
GTCATCAAGAACCGGGGACACTTCCCCAACGACATCGCGGCGCGCAAACTGCTGTGGCTGGCGATCTGCGACATCGAGGACAAACGGGCCCGGCAACGCG
AGAAGGAACGCGGCAAGCCCGCCGCCACCCGCAAAGCCCCCGGACGACTCGTCGAGGGCCAGGTCGTGACGAACTGGAAACAGGCCCTCGGGCAACTCGC
CCTGGCCTACCCCGACCGCATCGAACCCCACCTCAACTAGACCCAACCAGCAACTACAGGAAACCCAGGAGTCACGGTCTTACACAGACATCTTGACAAG
CTC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1386 bp461 aa551440+No
ORF function : Transposase
Description :

ORF sequence :

MSMALDDKQQSDDQQLSELAEPRSTAEVAEALQASGMVDELLAQIDTGQVQITGDGGLIPGLIKLALERGLKAELTDHLGYEKGDPAGRELPNARNGSSP
KTVQSEAGPVELNVPRDRAGTFTPRLVPKGSRRLGGLDDMIISLYAGGMTLRDIQHHLASTIGTDLSHETISKICDEVLDAVDEWQNRPLEALYPVIYLD
ALVVKVKDGAHVRNKHAHIAIGVDMTGVKHVLGIWIQAEEGAKFWAGVCANLANRGVRDVLIVCCDGLTGFPEAIETTWPLATVQTCVVHLIRNSMRFVN
YKDRKDVARAIKPIYTAPDAETARREWEAFRDSELGLKYPSAAAAFDRAWDRFIPFLAFPPELRKVIYTTNSIESLNYQLRKVIKNRGHFPNDIAARKLL
WLAICDIEDKRARQREKERGKPAATRKAPGRLVEGQVVTNWKQALGQLALAYPDRIEPHLN

 

Blast result :
Comments
ISGte1 is 85% aa similar to ISMgi5.
References