ISSer2
- Family IS256
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NC_009142 | ND | Saccharopolyspora erythraea | Saccharopolyspora erythraea NRRL 2338 |
DNA section
IS Length : 1473 bp
Ends
IR Length : 22/28
IRL : GGGCGTGTCAGGTGGGTTGTGTACAAGATCCGATAGTTGATGGAGTACGC
IRR : GAGCCTGTCAAGTGGTTTGTGTATAGGACTTTGGGTGGGTCAGTTGAGGT
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
CCGTGGGCCG | TTCCACAGGC | 0 | |
TCGCCTGGGG | CAGTTGGGCG | 0 | |
TTCCACAACG | CCCACCGCG | CCCGTTTCAT | 9 |
GGGCGCCTGG | CGGTCGGC | CTCGCCGCTT | 8 |
GGTTGGGCGC | CAACGACT | ACTCGGTGCA | 8 |
DNA sequence
GGGCGTGTCAGGTGGGTTGTGTACAAGATCCGATAGTTGATGGAGTACGCACCGATGGGCACGCGTGATTCGCAGCAGCAGGAAGGACATCCGTTCGGGA
CGGCCGCACAGCCCTCGTCAGCACGGGACGCGGTCAATGAGATGATCGAGGCAGGCCTGCTCGATGGGCTGATGGACACCGTCGACCGGGGCGGGCTGGC
GTTGACCGGGCAGGGCGGGTTTTTGCCCGAGCTGGTCAAAGCCGTGCTCGAGCGTGGGCTGCAAACCGAAATGTCGGACCATCTCGGGTATGACAAGGGG
GATCCGGCCGGGCGGGGTAGTCCGAACTCGCGCAACGGTGCCAGCGGTAAGACGATCTCGACCGAGGTCGGCGATGTCGATCTGGAGGTGCCCCGCGACC
GGGCGGGCTCGTTCGAGCCGCGGCTGGTGCCCAAGGGGTCGCGGCGGGCCGGCGGCCTGGACGAGATCATCATCTCGCTGTACGCGGGCGGGATGACCGT
CCGCGACATCCAGCACCACCTGCAGCGCACCTATGGCACCGAGCTCTCCCACGAGACGATTTCCAAGATCACCGACGCGGTGCTCGAGGAGGTCACGGCC
TGGCAGTCGAGGCCGCTGGAAGAGATCTACCCGATCATCTACCTGGATGCGCTGGTGGTGAAGGTGCGTGACGGCCACCAGGTCCGCAACCGCTCTGCCC
ACATCGCCGTCGGTGTGGATCTCGACGGTGTCAAGCACGTCCTCGGGATCTGGATCCAGGCCTCCGAAGGGGCGAAGTTCTGGGCCGGGGTGTGTGCCGA
GCTGCGCAACCGCGGCGTCAAAGACGTCCTGATCGTCTGCTGCGACGGCCTGCCCGGGTTGCCGGAGGCGATCGAGGCGACCTGGCCGTCCTCGACGGTG
CAGACCTGCACGGTGCATCTGATCCGGGCGGCGATGCGGTTCGTCTCGTATCAGGACCGCAAGAAGGTCGCTGCGGCGTTGAAACCGATCTATACCGCGC
CCACCGTCCAGGCCGCCGAGACCGCCCTGCTGGAGTTCGCCGAGTCCGACCTCGGCCGCAAGTATCCGGCCGCCGTGCGGACCTGGGAAAACGCGTGGGA
ACGGTTCATCCCGTTCCTGTCGTTCCCACCCGAAGTCCGCAAGATCATCTACACCACGAACTCGATCGAGTCACTGAACTACCAACTCCGCAAGATCATC
AAAAACCGCGGGCACTTCCCCTCCGACGACGCGGTGATCAAGCTGTTGTGGCTGGCCATCCGCGACATCGAAGACAAACGCGCCCGACAACGCGACAAAC
AACGCGGACTACCCACCCACCAGCGCAGCGCCCCCGCACGTCTGGTCGAAGGCGCCACCGTCCACGGCTGGAAACAAGCCCTCGGCGCCCTCGCACTGCA
CTTCCCCGACCGACTCGACCCCTACCTCAACTGACCCACCCAAAGTCCTATACACAAACCACTTGACAGGCTC
CGGCCGCACAGCCCTCGTCAGCACGGGACGCGGTCAATGAGATGATCGAGGCAGGCCTGCTCGATGGGCTGATGGACACCGTCGACCGGGGCGGGCTGGC
GTTGACCGGGCAGGGCGGGTTTTTGCCCGAGCTGGTCAAAGCCGTGCTCGAGCGTGGGCTGCAAACCGAAATGTCGGACCATCTCGGGTATGACAAGGGG
GATCCGGCCGGGCGGGGTAGTCCGAACTCGCGCAACGGTGCCAGCGGTAAGACGATCTCGACCGAGGTCGGCGATGTCGATCTGGAGGTGCCCCGCGACC
GGGCGGGCTCGTTCGAGCCGCGGCTGGTGCCCAAGGGGTCGCGGCGGGCCGGCGGCCTGGACGAGATCATCATCTCGCTGTACGCGGGCGGGATGACCGT
CCGCGACATCCAGCACCACCTGCAGCGCACCTATGGCACCGAGCTCTCCCACGAGACGATTTCCAAGATCACCGACGCGGTGCTCGAGGAGGTCACGGCC
TGGCAGTCGAGGCCGCTGGAAGAGATCTACCCGATCATCTACCTGGATGCGCTGGTGGTGAAGGTGCGTGACGGCCACCAGGTCCGCAACCGCTCTGCCC
ACATCGCCGTCGGTGTGGATCTCGACGGTGTCAAGCACGTCCTCGGGATCTGGATCCAGGCCTCCGAAGGGGCGAAGTTCTGGGCCGGGGTGTGTGCCGA
GCTGCGCAACCGCGGCGTCAAAGACGTCCTGATCGTCTGCTGCGACGGCCTGCCCGGGTTGCCGGAGGCGATCGAGGCGACCTGGCCGTCCTCGACGGTG
CAGACCTGCACGGTGCATCTGATCCGGGCGGCGATGCGGTTCGTCTCGTATCAGGACCGCAAGAAGGTCGCTGCGGCGTTGAAACCGATCTATACCGCGC
CCACCGTCCAGGCCGCCGAGACCGCCCTGCTGGAGTTCGCCGAGTCCGACCTCGGCCGCAAGTATCCGGCCGCCGTGCGGACCTGGGAAAACGCGTGGGA
ACGGTTCATCCCGTTCCTGTCGTTCCCACCCGAAGTCCGCAAGATCATCTACACCACGAACTCGATCGAGTCACTGAACTACCAACTCCGCAAGATCATC
AAAAACCGCGGGCACTTCCCCTCCGACGACGCGGTGATCAAGCTGTTGTGGCTGGCCATCCGCGACATCGAAGACAAACGCGCCCGACAACGCGACAAAC
AACGCGGACTACCCACCCACCAGCGCAGCGCCCCCGCACGTCTGGTCGAAGGCGCCACCGTCCACGGCTGGAAACAAGCCCTCGGCGCCCTCGCACTGCA
CTTCCCCGACCGACTCGACCCCTACCTCAACTGACCCACCCAAAGTCCTATACACAAACCACTTGACAGGCTC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1380 bp | 459 aa | 55 | 1434 | + | No |
Chemistry : DDE
ORF sequence :
MGTRDSQQQEGHPFGTAAQPSSARDAVNEMIEAGLLDGLMDTVDRGGLALTGQGGFLPELVKAVLERGLQTEMSDHLGYDKGDPAGRGSPNSRNGASGKT
ISTEVGDVDLEVPRDRAGSFEPRLVPKGSRRAGGLDEIIISLYAGGMTVRDIQHHLQRTYGTELSHETISKITDAVLEEVTAWQSRPLEEIYPIIYLDAL
VVKVRDGHQVRNRSAHIAVGVDLDGVKHVLGIWIQASEGAKFWAGVCAELRNRGVKDVLIVCCDGLPGLPEAIEATWPSSTVQTCTVHLIRAAMRFVSYQ
DRKKVAAALKPIYTAPTVQAAETALLEFAESDLGRKYPAAVRTWENAWERFIPFLSFPPEVRKIIYTTNSIESLNYQLRKIIKNRGHFPSDDAVIKLLWL
AIRDIEDKRARQRDKQRGLPTHQRSAPARLVEGATVHGWKQALGALALHFPDRLDPYLN
ISTEVGDVDLEVPRDRAGSFEPRLVPKGSRRAGGLDEIIISLYAGGMTVRDIQHHLQRTYGTELSHETISKITDAVLEEVTAWQSRPLEEIYPIIYLDAL
VVKVRDGHQVRNRSAHIAVGVDLDGVKHVLGIWIQASEGAKFWAGVCAELRNRGVKDVLIVCCDGLPGLPEAIEATWPSSTVQTCTVHLIRAAMRFVSYQ
DRKKVAAALKPIYTAPTVQAAETALLEFAESDLGRKYPAAVRTWENAWERFIPFLSFPPEVRKIIYTTNSIESLNYQLRKIIKNRGHFPSDDAVIKLLWL
AIRDIEDKRARQRDKQRGLPTHQRSAPARLVEGATVHGWKQALGALALHFPDRLDPYLN
Blast result :
Comments
ISSer2 is 79% aa similar to ISAar6.
References