ISTdr1

  • Family IS256
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s)
Accession numberTranspositionOriginHost
NZ_AFWT01000075.1 ND Thiorhodococcus drewsii
Thiorhodococcus drewsii AZ1
DNA section
IS Length : 1384 bp

Ends


IR Length : 19/23

IRL : GAGTTATTGTGATTTCTGGTGTACAGACTCAGAGAAGGGATGGCGTATCC
IRR : GAGTTAATGTCAAATCTGGTGTATGGCCTCCATCAGGCGGCGATCCGATC

Insertion site


Left flankDirect repeatRight flankDR Length
GATTCGGGATCAGGAGTTAC0
GTAGTCGTCCTAGCGGACGC0

DNA sequence

GAGTTATTGTGATTTCTGGTGTACAGACTCAGAGAAGGGATGGCGTATCCTGCCGACTGATCACGACCAAGATCACAGACGACAGAGGTGGATACGCCAT
GACCGAGTCTACGCTTGAAGGTCTTTCACAACCAGAGATCGAGGAGCACGACCCGCTGCATGCGTTGCTCAGGAAAGGGGCGCGCGAACTCATCGCTCAG
GCCGTCGAGGTGGAGTTGGCGAGCTTTTTGGCCGGGTATGCCGATCAACGCCTTGAGGATGGGCGCCGAGCGGTGGTGCGCAACGGCTACCTGCCCGAAC
GGACGGTGCAGACGGGCCTGGGAGACGTGGCGGTGAAGGTGCCGAAGGTCCGTGACCGCCGTGGTGGTGGAGCGGTCTTCCACTCGAGCCTGCTGCCGCC
GTATCTGAAGCGCTCGCGCAGTGTCGAGGAACTGATCCCCTGGCTCTATCTCAAGGGGATCTCGACTGGTGACTATCAGGAAGCGCTCGCGGCGTTGCTC
GGTGATCGAGCCAAGGGGCTGTCGGCCAACACCATTGTGCGTCTCAAGCAGCAGTGGAGCGAGGAGCATCGGCGCTGGAGCCAGCGCGACCTCAGCGATC
GGCGTTACGTCTATTGGTGGGCCGACGGCGTCTACAGCAACGTGCGCCGAGATGATCGCGTCTGTCTGCTGGTGATCGTCGGCGTCACCGAGCATGGCCA
CAAGGAACTGGTCGCCGTCGAGGATGGCTATCGGGAGTCCGAGGCCAGTTGGGGCGAAGTGCTTACCAGCCTCCGCGAGCGTGGACTGACGGCCGGCCCC
AAGCTCGCCGTGGGCGACGGGGCGCTGGGGTTCTGGAAGGCGCTCGCCAAGGCCTATCCGGACACCGTCCACCAGCGCTGCTGGGTGCACAAGACAGCCA
ATGTGCTCGCCAAGCTGCCCAAGTCCGTGCAGCCGAAGGTCAAGGCCGACCTGCAGGAGATATGGATGGCCGAGACCCGCACATCGGCCAACCAGGCATT
CGAGCGCGCCCTCAAGCGCTTCGAGGCCAAATATCCGAAGGCCATGGCTTGCCTGGCCAAGGATCGGGAGACCTTGCTCGCTTTCTACGACTATCCGGCC
GAGCATTGGGTGCATATTCGCACCACCAACCCGATCGAATCGACCTTCGCCACCGTGCGCCTACGCACCAACCGCACCCGCAACTGCGGGGCACGCGAGA
CCACGTTGGCGATGGTCTTCAAGCTGCTCCAGTCGGCGCAGAAGAACTGGAGACGCATCAAGGGATTTGGAAAACTGGAACTGGTCGTCAATAACGTCCC
GTTCCGCGATGGAGAACAACTGAACGATCAGTCAGATCGGATCGCCGCCTGATGGAGGCCATACACCAGATTTGACATTAACTC
Protein section
ORF number : 1

 

ORF 1
LengthBeginEndStrandFusion ORF
1255 bp417 aa981352+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MTESTLEGLSQPEIEEHDPLHALLRKGARELIAQAVEVELASFLAGYADQRLEDGRRAVVRNGYLPERTVQTGLGDVAVKVPKVRDRRGGGAVFHSSLLP
PYLKRSRSVEELIPWLYLKGISTGDYQEALAALLGDRAKGLSANTIVRLKQQWSEEHRRWSQRDLSDRRYVYWWADGVYSNVRRDDRVCLLVIVGVTEHG
HKELVAVEDGYRESEASWGEVLTSLRERGLTAGPKLAVGDGALGFWKALAKAYPDTVHQRCWVHKTANVLAKLPKSVQPKVKADLQEIWMAETRTSANQA
FERALKRFEAKYPKAMACLAKDRETLLAFYDYPAEHWVHIRTTNPIESTFATVRLRTNRTRNCGARETTLAMVFKLLQSAQKNWRRIKGFGKLELVVNNV
PFRDGEQLNDQSDRIAA

 

Blast result :
Comments
ISTdr1 is 74% aa similar to ISAzo34.
References