ISTdr1
- Family IS256
- Group
Isoform Synonym(s)
Accession number | Transposition | Origin | Host |
---|---|---|---|
NZ_AFWT01000075.1 | ND | Thiorhodococcus drewsii | Thiorhodococcus drewsii AZ1 |
DNA section
IS Length : 1384 bp
Ends
IR Length : 19/23
IRL : GAGTTATTGTGATTTCTGGTGTACAGACTCAGAGAAGGGATGGCGTATCC
IRR : GAGTTAATGTCAAATCTGGTGTATGGCCTCCATCAGGCGGCGATCCGATC
Insertion site
Left flank | Direct repeat | Right flank | DR Length |
---|---|---|---|
GATTCGGGAT | CAGGAGTTAC | 0 | |
GTAGTCGTCC | TAGCGGACGC | 0 |
DNA sequence
GAGTTATTGTGATTTCTGGTGTACAGACTCAGAGAAGGGATGGCGTATCCTGCCGACTGATCACGACCAAGATCACAGACGACAGAGGTGGATACGCCAT
GACCGAGTCTACGCTTGAAGGTCTTTCACAACCAGAGATCGAGGAGCACGACCCGCTGCATGCGTTGCTCAGGAAAGGGGCGCGCGAACTCATCGCTCAG
GCCGTCGAGGTGGAGTTGGCGAGCTTTTTGGCCGGGTATGCCGATCAACGCCTTGAGGATGGGCGCCGAGCGGTGGTGCGCAACGGCTACCTGCCCGAAC
GGACGGTGCAGACGGGCCTGGGAGACGTGGCGGTGAAGGTGCCGAAGGTCCGTGACCGCCGTGGTGGTGGAGCGGTCTTCCACTCGAGCCTGCTGCCGCC
GTATCTGAAGCGCTCGCGCAGTGTCGAGGAACTGATCCCCTGGCTCTATCTCAAGGGGATCTCGACTGGTGACTATCAGGAAGCGCTCGCGGCGTTGCTC
GGTGATCGAGCCAAGGGGCTGTCGGCCAACACCATTGTGCGTCTCAAGCAGCAGTGGAGCGAGGAGCATCGGCGCTGGAGCCAGCGCGACCTCAGCGATC
GGCGTTACGTCTATTGGTGGGCCGACGGCGTCTACAGCAACGTGCGCCGAGATGATCGCGTCTGTCTGCTGGTGATCGTCGGCGTCACCGAGCATGGCCA
CAAGGAACTGGTCGCCGTCGAGGATGGCTATCGGGAGTCCGAGGCCAGTTGGGGCGAAGTGCTTACCAGCCTCCGCGAGCGTGGACTGACGGCCGGCCCC
AAGCTCGCCGTGGGCGACGGGGCGCTGGGGTTCTGGAAGGCGCTCGCCAAGGCCTATCCGGACACCGTCCACCAGCGCTGCTGGGTGCACAAGACAGCCA
ATGTGCTCGCCAAGCTGCCCAAGTCCGTGCAGCCGAAGGTCAAGGCCGACCTGCAGGAGATATGGATGGCCGAGACCCGCACATCGGCCAACCAGGCATT
CGAGCGCGCCCTCAAGCGCTTCGAGGCCAAATATCCGAAGGCCATGGCTTGCCTGGCCAAGGATCGGGAGACCTTGCTCGCTTTCTACGACTATCCGGCC
GAGCATTGGGTGCATATTCGCACCACCAACCCGATCGAATCGACCTTCGCCACCGTGCGCCTACGCACCAACCGCACCCGCAACTGCGGGGCACGCGAGA
CCACGTTGGCGATGGTCTTCAAGCTGCTCCAGTCGGCGCAGAAGAACTGGAGACGCATCAAGGGATTTGGAAAACTGGAACTGGTCGTCAATAACGTCCC
GTTCCGCGATGGAGAACAACTGAACGATCAGTCAGATCGGATCGCCGCCTGATGGAGGCCATACACCAGATTTGACATTAACTC
GACCGAGTCTACGCTTGAAGGTCTTTCACAACCAGAGATCGAGGAGCACGACCCGCTGCATGCGTTGCTCAGGAAAGGGGCGCGCGAACTCATCGCTCAG
GCCGTCGAGGTGGAGTTGGCGAGCTTTTTGGCCGGGTATGCCGATCAACGCCTTGAGGATGGGCGCCGAGCGGTGGTGCGCAACGGCTACCTGCCCGAAC
GGACGGTGCAGACGGGCCTGGGAGACGTGGCGGTGAAGGTGCCGAAGGTCCGTGACCGCCGTGGTGGTGGAGCGGTCTTCCACTCGAGCCTGCTGCCGCC
GTATCTGAAGCGCTCGCGCAGTGTCGAGGAACTGATCCCCTGGCTCTATCTCAAGGGGATCTCGACTGGTGACTATCAGGAAGCGCTCGCGGCGTTGCTC
GGTGATCGAGCCAAGGGGCTGTCGGCCAACACCATTGTGCGTCTCAAGCAGCAGTGGAGCGAGGAGCATCGGCGCTGGAGCCAGCGCGACCTCAGCGATC
GGCGTTACGTCTATTGGTGGGCCGACGGCGTCTACAGCAACGTGCGCCGAGATGATCGCGTCTGTCTGCTGGTGATCGTCGGCGTCACCGAGCATGGCCA
CAAGGAACTGGTCGCCGTCGAGGATGGCTATCGGGAGTCCGAGGCCAGTTGGGGCGAAGTGCTTACCAGCCTCCGCGAGCGTGGACTGACGGCCGGCCCC
AAGCTCGCCGTGGGCGACGGGGCGCTGGGGTTCTGGAAGGCGCTCGCCAAGGCCTATCCGGACACCGTCCACCAGCGCTGCTGGGTGCACAAGACAGCCA
ATGTGCTCGCCAAGCTGCCCAAGTCCGTGCAGCCGAAGGTCAAGGCCGACCTGCAGGAGATATGGATGGCCGAGACCCGCACATCGGCCAACCAGGCATT
CGAGCGCGCCCTCAAGCGCTTCGAGGCCAAATATCCGAAGGCCATGGCTTGCCTGGCCAAGGATCGGGAGACCTTGCTCGCTTTCTACGACTATCCGGCC
GAGCATTGGGTGCATATTCGCACCACCAACCCGATCGAATCGACCTTCGCCACCGTGCGCCTACGCACCAACCGCACCCGCAACTGCGGGGCACGCGAGA
CCACGTTGGCGATGGTCTTCAAGCTGCTCCAGTCGGCGCAGAAGAACTGGAGACGCATCAAGGGATTTGGAAAACTGGAACTGGTCGTCAATAACGTCCC
GTTCCGCGATGGAGAACAACTGAACGATCAGTCAGATCGGATCGCCGCCTGATGGAGGCCATACACCAGATTTGACATTAACTC
Protein section
ORF number : 1
ORF 1
Length | Begin | End | Strand | Fusion ORF | |
---|---|---|---|---|---|
1255 bp | 417 aa | 98 | 1352 | + | No |
Chemistry : DDE
ORF sequence :
MTESTLEGLSQPEIEEHDPLHALLRKGARELIAQAVEVELASFLAGYADQRLEDGRRAVVRNGYLPERTVQTGLGDVAVKVPKVRDRRGGGAVFHSSLLP
PYLKRSRSVEELIPWLYLKGISTGDYQEALAALLGDRAKGLSANTIVRLKQQWSEEHRRWSQRDLSDRRYVYWWADGVYSNVRRDDRVCLLVIVGVTEHG
HKELVAVEDGYRESEASWGEVLTSLRERGLTAGPKLAVGDGALGFWKALAKAYPDTVHQRCWVHKTANVLAKLPKSVQPKVKADLQEIWMAETRTSANQA
FERALKRFEAKYPKAMACLAKDRETLLAFYDYPAEHWVHIRTTNPIESTFATVRLRTNRTRNCGARETTLAMVFKLLQSAQKNWRRIKGFGKLELVVNNV
PFRDGEQLNDQSDRIAA
PYLKRSRSVEELIPWLYLKGISTGDYQEALAALLGDRAKGLSANTIVRLKQQWSEEHRRWSQRDLSDRRYVYWWADGVYSNVRRDDRVCLLVIVGVTEHG
HKELVAVEDGYRESEASWGEVLTSLRERGLTAGPKLAVGDGALGFWKALAKAYPDTVHQRCWVHKTANVLAKLPKSVQPKVKADLQEIWMAETRTSANQA
FERALKRFEAKYPKAMACLAKDRETLLAFYDYPAEHWVHIRTTNPIESTFATVRLRTNRTRNCGARETTLAMVFKLLQSAQKNWRRIKGFGKLELVVNNV
PFRDGEQLNDQSDRIAA
Blast result :
Comments
ISTdr1 is 74% aa similar to ISAzo34.
References