ISfinder Mirror Site

ISStau11

Family ISAzo13
Group

MGE type ISRelated element(s) :
Isoform Synonym(s)

Accession number	Transposition	Origin	Host
NC_014623	ND	Stigmatella aurantiaca	Stigmatella aurantiaca DW4/3-1

DNA section

IS Length : 1349 bp

Ends

IR Length : 32

IRL : GGAGGCTGGAGGAAATAACTTTTCCACTTTCAGTTGTTGAACCAATGAAC
IRR : GGAGGCTGGAGGAAATAACTTTTCCACTTTCACGGCCGCACATTGCTTGC

Insertion site

Left flank	Direct repeat	Right flank	DR Length
GAATCTGTAACC	TGA	GGACCCGGTA	3

DNA sequence

GGAGGCTGGAGGAAATAACTTTTCCACTTTCAGTTGTTGAACCAATGAACTTGGCAACGAGGGAAACGGATGGGCGAGGAGTCAACGCTGAAAGCCATCC
AGAGCAAGTATGAGGCTTTGCGCGCCGACATAAATGAGGCTGTCCGCCGAAGATGGGCGGCAGCGGAAGCCAGGGCATTGGGCCCCAAAGGAATCCGTCT
TGTTGCCCAAGCAACGGGATTGTCGCTGCCGACGGTTCGCCGAGGAATGAGGGAGCTGAGGCAAGGCATCCCGCAGGAGGTATTCCGCGCACGTCGGCCC
GGAGGAGGTCGAAGGAAACTGACAGCAAAAGATGCGACGCTCCTGGCAGACCTCGAGGCCTTGGTGGACCCAGCAACTCGTGGGGATCCCACCTCACCGT
TGCGTTGGACATGCAAAAGCACGTTGAAGCTCGCAGAGGAGCTGCATAACCAAGGCCATGGCCTCAGCGCGCATACGGTGGGCGAGGTTCTCCACCGACA
GGGCTACAGCCTTCAGAGCAATCGAAAGACCCGTGAGGGAGCACAACATCCGGACCGCAACGCGCAGTTCGAGTACCTGAATGCCCGGGTGAAGGAGTTC
CAGGAGCGCGGCTCACCGGTCATCTCCGTAGACGCGAAGAAGAAGGAGCTGGTGGGGGACTTCAAGAATGCCGGGCGAGAGTGGAACCCCAAGGGGCAGC
CACCTCGGGTGCGCGTCCATGACTTTGTGGACGAGGAACTGGGCAAGGCCTTGCCCTATGGCGTCTACGACATGGGTGCCAACGAAGGCTGGGTGAGCGT
CGGGGTGACGCATGACACCCCCGCCTTCGCGATCGCGACCATTCGGACGTGGTGGCTCGAAATGGGGAGTGTGCGCTATCCGAAGGCGAAGGAGTTGCTC
ATCATCGCCGATAGTGGTGGCAGCAACAGCGCCCGCGCCCGCCTGTGGAAGGTGGAGTTGCAGCATCTGGCGGACGAAATGGGCCTGCGGATGGCCGTCA
GCCATCTGCCACCTGGTACCAGCAAGTGGAACAAGATTGAGCATCGGATGTTCTGCCACATCACTCACAACTGGCGCGGGCGGCCGTTGGAAAGCCGAGA
AGTCATTGTCAATCCGATTGGGAGTACGACGACCGCCAAGAGACTCCACATTCAGGCCAGCCTCGATATGTCGAACTACCCCACGGGCATCAAGGTACGC
GACGAGGACATGGAAGCATTGAACCTCGAACGCGATGACTTCCATGGGGAATGGAACTACATGCTCCTTCCCAACGCCCCGAGTCCTCCATCACGATAGG
CAAGCAATGTGCGGCCGTGAAAGTGGAAAAGTTATTTCCTCCAGCCTCC

Protein section

ORF number : 1

ORF 1

Length		Begin	End	Strand	Fusion ORF
1230 bp	409 aa	70	1299	+	No

ORF function : Transposase
Chemistry : Unknow

ORF sequence :

MGEESTLKAIQSKYEALRADINEAVRRRWAAAEARALGPKGIRLVAQATGLSLPTVRRGMRELRQGIPQEVFRARRPGGGRRKLTAKDATLLADLEALVD
PATRGDPTSPLRWTCKSTLKLAEELHNQGHGLSAHTVGEVLHRQGYSLQSNRKTREGAQHPDRNAQFEYLNARVKEFQERGSPVISVDAKKKELVGDFKN
AGREWNPKGQPPRVRVHDFVDEELGKALPYGVYDMGANEGWVSVGVTHDTPAFAIATIRTWWLEMGSVRYPKAKELLIIADSGGSNSARARLWKVELQHL
ADEMGLRMAVSHLPPGTSKWNKIEHRMFCHITHNWRGRPLESREVIVNPIGSTTTAKRLHIQASLDMSNYPTGIKVRDEDMEALNLERDDFHGEWNYMLL
PNAPSPPSR

Blast result :

Comments

ISStau11 is 74% aa similar to ISCap1.

References

1] ISfinder submission (2012)
2] Huntley,S., Hamann,N., Wegener-Feldbrugge,S., Treuner-Lange,A., Kube,M., Reinhardt,R., Klages,S., Muller,R., Ronning,C.M., Nierman,W.C. and Sogaard-Andersen,L. (2011) Mol. Biol. Evol. 28 (2), 1083-1097.