ISPa43

  • Family Tn3
  • Group
MGE type ISRelated element(s) :
Isoform Synonym(s) TnPa43
Accession numberTranspositionOriginHost
ND Pseudomonas aeruginosa
Pseudomonas aeruginosa
DNA section
IS Length : 19903 bp

Ends


IR Length : 38

IRL : GAGGGTCGGCAGGGATTCATGTAAAAAACCGCAGAAACAGGCTTAAGTCC
IRR : GAGGGTCGGCAGGGATTCATGTAAAAAACCGCAGAAACGAACCTAACCTT

Insertion site


Left flankDirect repeatRight flankDR Length
GCGCACGCCCGCCTTGCATTCTAGCCCCTTCATTGC0

DNA sequence

GAGGGTCGGCAGGGATTCATGTAAAAAACCGCAGAAACAGGCTTAAGTCCCTGTCACAGTTGGGTTTTTATCATTCCTCTGTGTCATTTTTTCTGCCCCT
TCAACAGGGTCTTTCGCGGACGCATCAGGACTGGGCACCGTAGCGCTGAAACGCTCCAGCATGCTGACCACGACCTGCTCTTGCGCCGTGACGGATGACT
TGGCTGCGGTCAGCGCCAGTTCCAGCTGTTGCTTTGCCGTGAGCAGTTCGTTGGCCTTGGCCTCCAACTGTTCGTTCGAGGCGTTGAGTTGCTTGACGGC
CGCCTCCTGCTCAACCAGGCGCCGACCCAACTCCTCGGTGCGCCGTTGTGAGGGCAGCTTGTCGGACTTGTTGGCGTTGACCTGTTGGTCGACCTGCAGA
AGGTTCCACAGGTCATTGTTGGCCCACAGGGAGAACGGAATAGCGTGGTCGACCGCGAAGCGCTGGTTGAGCGGCCGGCCGGACCAGGTGCACCGGGTGA
CGCCGGCTCTTTCGTAGGCCTGGCGGGCGAGCATGGTCGCGCGTTCCGGGTCGGGGCGCGCAAGCAGCAGCGGCAGCACGGCGCCGGATGTGATTCCCTG
CCGGTATCCGAAGCGTTCCGTGAGTGCTGCCCATCTCAGCACGACCGCATCGGCGATCCAGTGCCCGAGCAGGCTCAGTTCTTTCCAGATGTCCGCGGGC
ATCAGCACGAGGCCTGACGGGCTGTCGTATTCGAAGACGGTCCCTGACTCCAGGGCTCCGCCCGAGAACTCGACCGGGCCCAAGCGGATGGTCTGGGCGA
TCAAGCGAAGCACGGATCTGAGCTGATCTTGCATGCCTCCGCTCAGGCGCCCGGCAAGCCAGTCTAGGTGCCAGGCGCTGAGTCCTCCGTGCGCCCCCTG
GTCACGGTAGGGCTGCATGAGGGCGGTGAGCGCTGCGCGAAACTTGACGGGCTTGATGCCCCCTGCCCCTTCGGACTGGGATTGGGGGGTGAATTGCTGC
GATGCAAAGATCGGCCAGTAGTACATCAGCCACTTCTCCGCGATGCACAGGAGAGGAACACCCACCTGGCCGCTGGCCTGCCAGACGGCGGTCTTGCTCT
CGTGCATGGCGATGTCGGCCAGGGCACGGAACAGGGCCAGCTTGTAGGTGGCCACCTTCTTATCCCGATTGAGCACACCCTCGATCTGGTCGATAGCCCG
GAGGGTGCCGGTGGTGCGCAGTTCCAGCAGCAAGGTGTACCAGCTGGTGCCAGCCCGGGCCAGGGCGTCGTCGGAATCCCAGCGGCCGATGCACTGAAAT
CCCAAGCGCTCGAACAGCAGCTGGATCTCTTCGGCGGTGTAGCCCTGGAACAGCCGACCACTGGTATCGCGCTGCTCCACCAGGTTGTCTCCACGGGTCA
GTGGCAGGGACAGCAGCAGGCGGCCGTGCGGGTTGAGCAGCGCACGGATGGCCAGCGCAGCATCGAACAGTTGGTGGTCTGGAACGTGCATCAGGACTGC
GCTGCAGAGGATCCCATCGAACTTGCCATCAAAGGGCATGCCCAGCTCGGGCAGCGCTGCGCTAGCAAGCCGGTTTTCAAGCTCGGGGTGGGCGACCTTG
GCCGCCGCGCGCAGACCGTCCGTGGGCTCCACGCCGTAGGCTTCGTAGCCGCTCTTGAGGAGGTGCGCCAAGTCACGACCAGATCCTGCCCCGATATCAA
GCAACCGGGCCCCTGGCACAAATGCCAGCGGGAAGTACTTGGCCACAGGGCTGCCCACCGATTCGTACCGGGTGGCTATGTCCTGGGCGTTGTCTTCGTA
GAAGCGAGCCGTCGATGCGTCCATGGAGCGGTCACTCAGAAGGGTTATGTATACCTAAGTTTGTAAACTTCTAAATTTCCCCAGCAACAATGGGGCTTTT
CTCAATAGGGAGAGCACTGAGAAAAAGTTTATGTAAACAAATGCCGACCGACCAACGAGGTTGTTTACAGTCCTCCACGAACCCGTGAAGCGTATAGGCT
TGAATGGACAGGCAGGAACTATACAACTGGCAGATCAAGCTTGACACCGAAGTGCCCCGCATCCGCAGGTGAACGGTGCCACCCGCCGACTATCATTGCA
TCACACTTACAGACGATCTGCGCATGGCCCAATTGTTTTAATTGCTTTCGATAAAGGCGCGCATTCTGTCGCGACAGATACCCTACTCTCTGTCCTTCAA
TAGTCACTCGAACGGCTCGATTGTCATGCGGATTGGAATCCTCCAAGTAAAGGATGGCCTCTGTCACATACTCGGCGCCGTCCTCTGAGCGACCGCCACT
GATGGCACCGCATGCACTCCTCCACAATGGCCCTGGTGGTGTGCCAGTCATCTGAGGCCGCATTCCAGCGAATTATCTCGTCGGGTGTGGTGTACGCCTC
CCACACCCGTTCAATCGGGGCTCGTACGTTCGTCTCGACGGTGAGTTGCATAGCGGCTCTCTCCAGTTTGGTGGCAGCGGGTTGTTCACTGCCATTTGCG
GGGGTGAACAGCAGATATTATCGTGCAAAGGCCTATTGTGACGTAGGCAGAAAGCGACACGGGCGGCGCTTGCCAGGCGCTGCGACCATCCTTCTGTGTT
GCATTCCGCGTCCCGCTGTCATGCCTATGTCATACCGACGATCTACCATCCTTTCATGATCGATCTGTAGATCAAAGTTAATTATTGATTACATGATCGA
ATCAGCATGCCGGAAGGAGCCGCAGTTTGCCCTCCCGATTATTCGTTGGAAGACCTTGGAGCATCACCATGTTTGCAGAGCAGCAACGCGAATATCTCGA
CAAGGGATATACGAAGATTGAAAGCTTTTTCTCCGCGGAGGAAGTAGCGAAGATTCTTGAAGACGTCAAGCAAATTGAATTGGGAGCTATTGGCGTAGCT
TCGGACAATGAGACTTACCAGTTCGAAAAGAAGAATGGCGAGACGACGAAGCTACTGCGTCGCGTCGAGAATCCTCACCTTTATTTCGATGCAATAGATT
CTTTGGTCAGGTCGGAAAAAATCGTCGATTTGCTTCGGCATTTCCTGGGCGAAAACATCCGTTTGCACAATAGCAAAATCAACTTCAAGCCGCCATCAGG
CGCGCCAGTCCAGTGGCATCAGGACTGGGCATTCTATCCCCACACAAACGATGATTTTCTTACTCTCGGAATTTTCCTCGACGAGACAAGTGAGAAAAAT
GGCGCGATGGCATGCTTGCCAGGCTCCCACAAAGGAAAAGTGTACGACCACCGGAACGTCGAGACGGGCGAGTTTTGCCACGCGATCTCTCGCTCCAACT
GGGACGAAGCGCTCGACCCGACAGAAGGGGAGTTACTGACGGGACCCGTAGGAACTGTCACGTTGCATCACGTCCGGACCCTTCATGGTTCAGGCCCAAA
CCACTCAACGATCAGGCGGCGTTTTCTGCTCATCGGCTATGCCGCGGCTGATGCCTGGCCACTTCTGGGCTGTGGCAACTATGGGGATTATGAAAGCCTC
ATGGTCTCTGGCCGATCCACCGTATTCCCGCGCATGGTGGAACTCCCTTTGACTGTCCCGTATCCGTTGTCGATGTACGGTGATCGCATCTTTGAAAGTC
AACGAGCTTTGACTCAAAAGTACTACTGAAGTCTTTAACTCACTGAGGTCATAATGCAAGTTTTTACTCTGTTTTCGAAATTCAAGAAGGCGTTAACGCG
CGCCATTCTTGCCTTTATCGCCACAATCATAGTGTGCACACCCGCGCAGGCAGCTGAGGTTGTCAATGGTAAACTTCACCTGCGTTTTGCAATTGCGCCG
ATGCGTCCAACGCCTAGCCAGACCATCAAAGAGTTTGAGCCGATATTCAAGTATCTCGCCGACCAGCTCGGCGCGACCTATGAAATCGTCTCCCCGGAAA
GCTGGGCGGCAATATCTGTGGCAATGACAAATGGCCATGTCGATGTGGGCTGGCTCGGACCCTGGGGCTATGTCTTGTCGAATAAAAAGGCCGGCACCGA
AGTGCTTGCAACGGTCAAGTACCGCGGGGAGCCGTTCTACAAAGCCCTCATTGTCGGTCGCGCCGATCTGCCGATCAAAAAATGGCCCGAGGACGCGAAG
GGTTTGAAGCTGTCACTCAGTGATCAGGGCAACACTTCTGGCTGGCTCATCCCGATGGCGTACTTCAAGAGCATCGGCATCGACCCTGCGAGCTATTTTG
AATATCGTGAAGGTGCCACGTTTGGCCAGAACGAATCACAGATTCAGCACGGACTGATCGACCTCGGATCCGATATGGATCGGGGCCGGAACGGGATGAT
CGAAGCGGGTCAAATCGATCCTTCGAAGTCCAAGATCGTGTGGGAATCCAGCAAGCTGCCGAACGACGCGATATCCGTGCCGAAGGATTTTGATCCTGCT
CTGAAAGCGCGCATCACGGAAATACTGACGTCCTTGTCCGAAGAGAAAGCACAGTCGCTGATGGGCTCGGGCTATAACGGCTTCGTGAAGGCAAAGCACA
GCGATTACAAGGTAATCGAAGACGCCGGCCGCATCCTGGGAAAACTGTAAAGCACGAGGGGTCCGTTCTTGGATGAGGGCAGCGGACGACAAGGTGGACT
GACGCACGCCAGCTCCTTGTCTCCGCTGCACGAACATACGGGCGCGCATCGCAATACCACAGAGGATGAACCAATGAATCAGCGAATCGAAGAAGTCATG
CTGGCTAATGTCAAGAGGGACGTAGCCAGGAGAAAGCGGCATTTTGCAACGTCGGTCGTAGTACTCAGTTTGCTGGCAGTGGCCTGGTACGTGTGTCAGA
TAGAATTCCAGAAGCTAGGCGCCGGTTTACCGAGACTATGGTCATTCGTCGTGCAGATGTTTCCACCCGACCTGAGCGACCTGGACGTCATTCTAAAAGG
GGCTGGCGAGACGCTCGCCATGGCGACGATTGGCACGATATTCGCCACAATCATTGCATTTCCGCTGGCACTCATGGCTGCGCGTAATACCTGTCCGAAC
AAGTGGACCTATCGGGTATCCCGCGCCATCCTGAACGCCAGCCGCGGCACGGAGACATTTGTCTATGCACTTGTATTTGTAGCAGCAGTGGGCTTCGGTC
CGTTCTCCGGCGTACTGGCCATTACTTTCCACATGGTAGGGGCAATCGGCAAAATGTTTGCTGAAGCCATCGAGCCCGTTGACCAAGGGCCGTTGGATGC
GCTCGCCTTGACCGGTGCCAGCAGGGCAAAGATTATCCGCTACGGTCTGATCCCGGATGTTATGCCGCACCTGATCGCGAGCGTTCTATACATTTGGGAA
TTCAGTGTCAGAACGTCCACAGTACTGGGCATCGTAGGCGCAGGTGGAATTGGGCAGACCCTGAAAGATACTGTGGACTTGTTGGAATTCAACAAGATGA
TTACGGTACTGGCGGTTGTATTGCTGATGGTGTCGGCAATCGATTTCATCAGTGACCGGCTCAGGTACTTGATATTGGACACAAAACGCGAGGGATTCGA
AACTCTCCCTGCGAATAACTGATTGCTTCACGTATTACTGGAAGGGAGGTTCGCAATGAAAGATGTAGCGTTGCAGTTAAAGAATGTCGGTAAGTCATAC
GGCAATAAAGTTGTCCTGGAATCGATTGACTTCGAAGTACGTCACGGCTCAATGGTTGCCTTGCTCGGCACAAGCGGGGCAGGGAAGTCGACGCTTTTCC
GATGTCTCACTGGCCTTGAGCCGATTGACTCCGGTTCTATCGTGGCGCTCGGAGAATCCATACATGAACTGTCTCCGGCGCGTCTGCGGGCAGTACGTGG
CCAGATCGGGTTCGTGTTCCAACAACTGCACCTGGTGAAAAGGTTCTCAGCACTCGAGAATGTATTGGGTGCGCGTCTGGCAGAGATGCCCATTTGGCGC
GTCACATTGAAAAGCTTCAGCCGGGCTGACAAAGTGCTCGCGTTCGAATGTCTGGACCGGGTCGGCATGCTCGATTATGCAAACACGCCTACGCAACTGC
TGTCAGGCGGTCAGCAACAGCGTATTGCGATAGCGCGAGCCTTGGCGCAGAAGCCCAAGATTATTATTGCGGACGAACCCGTCTCCAGCCTCGATCCGCT
GACGGCGCGCTCGGTTCTGCAAACGCTGAAAGCCGCGGCTACAGATCTTAATGTCGCGGTCCTGTGCAGCCTGCACCAGGTAGACCTGGCCCGTGAGTTT
GGCGACCGCATCGTGGGCATGCGCGACGGACGTGTCGTTTTCGACGGCACGCCAGCGGAATTCACCGACGAGCGCGTGCATGCGCTTTACCAGGGTGCCC
GCTGGGAAGATGCACCAGCGGCCGAGAGCGACGCGCAGCACTCGGTGGCCGGTCTGGCTGTGGCATGAGGGGCGAAGCGATGACCACATCCACACGCCCC
ATACCCGTGCCGCCCCAGGGCACCGCACTGCACTGGCACCTGAGCGCGCCCTACAACGCCAAACATCTGCTGGTGCTGATCGCCGTCATGGTGCTGTTGT
TCGTGACCGGACAACGCACCGAAATGGACCGCATGGTGGCCATGACGGCACAGGCCGTGGCCAAGACCGTGGGCCTGGCTGACGATTCACAAGTCGCGCG
CGGCTTGTCGCGCGTCGGTCAAGCCATGTGGCCACCCGCCATCGCAGAAACCGAAGAGGTGGGCCGGATTCAGGACCTGGATCGCCAGAAGCTGCCCCTG
TTCTCGCACATCGAGACCCAGGAGCGCGTCGAGCAGAAGATGAATCTGGACACGCTGAAGATGGAAGCCACGACGGAAACCGTCGAAGTGCTGGTCAAGC
CGGTCGGCTATGTCTGGACGGTTTTCATCAAGATGATCGAGACCCTGGAGATTGCGCTGTGGGGCACGATCCTGTCGGTGCTGGTGTCGATTCCCCTGGC
GTATTTCGCGGCCCGCAACTACTAGCCCCAACCGTTTTACCTACACCGCTGCCCGCGGCACCATCAGTCTGCTGCGTTCAGCGCCGGAACTCATCGTCGC
TTTGTTCCTGGTGCTGGCCTACGGCTTTGGCCCCATCGCTGGCGTGCTGGCGCTGGGCCTGCATGCGGCCGGCTTCCTGGGCAAGTTCTACGCCGAGGAC
ATCGAGAACGCCGACAAGAAGCCGCAAGAGGCGCTGGAGGCCATCGGCGCGGGCAAGCTCAAGACGCTGTGGTACGGCGTCATCCCCCAGGTCTTGCCGC
AATACATCGCCTACACCGCCTACATCCTGGACCGCAACCTGCGCATGGCCACCGTCATCGGTCTGGTGGGCGCGGGCGGCATCGGCCAGGAACTCAAGGG
CCGTTTTGACATGTTCCAGTACGGCCATGTCATGACCATCCTGATCGCGATCTTCGTCTTTGTGTTCGTGCTGGACCAGTTGCAGGCGCGCATCCGCGCC
AAGCTGATCTGAGGCGACCGCTGACAACAAGGAACAACATGACAAACACTTCTGAAGCACCGGATCGTGCGCAGTGGCTGCGGCTGTGGTCGGCCTTGCC
GGCCGCAGCGGTCAAGGCCCTGGCGGCCGATCTGGCGGGCCAGCACCGGGTCGAAGACCTGGCGTTGCCGCAATCCGGTCTGGGCCTGCTGCCGCTGACC
GACAGCGCCCTGGGCGATACCTATTTCATCGGTGAGATTCCCTTGGCACAAGCGCATGTGCGGGTCACGACCACCCAAGGGCAGTCGATCGAAGGCGCGG
CCATTCTGGTGGACGACCGTGCCGGTGTGGCCCGTTCCATGGCCATCCTGGACGCGGTGCTGGCGGCCCGCATGCCAGGTTGTGAAGCGGCCCTGCGGTT
GCTCACCCAGGGTGCGACCGCCGTGGCGGAACAAGGCCGCCAGCGCCGCGCCTTACTCGCGGCCACGCGGGTGGACTTTGCCCTGCTGGGAACGAACGAG
GAGGACGATGATGAATGAGACTGGGATGGCGGCGGCACCGGCAGAAGCCGCGTGGCGCATCTGGCAAGCGCCGCGCCAGCAAACGGCGTTTCGCCAGTTG
ATGACCGCGTTTTCCTATCCGGGCCGCGTGGTGCCACTGGCCGATGGCGCTGAATCGGCGCTCCTGCTGGTGTTGACCACCCTGGTGGACAGCGCCTGTG
CGCTGGCCGATCCGCTGCACGCGCTATCAAGCGACGATCTGCGCCGACTGGGCGTGCGCTCGGCCAGTGTGGAGGCGGCCGAGTTCGTGCTGGCCGATGG
CAACCGTTTGCTGGAGGCCACGCCGCGCCTGGGATCGCTGGAAAACCCCGAACAAGGCGCGACCGTGGTGATGCGCGTCTCCCGTTTCGGTGAGGGTCCC
CATCTGCGGCTCACCGGGCCGGGTATTCAACACGAGCAGGTGCTGCAGGTCAGCGGCATCGATCCGGGCTGGTGGAAGCAACGGTCCGAATGGAATGCCC
ACTTCCCGCTGGGCGTGGACCTGATTCTGGTGAGCGGGCACGAGGTCGCGGTATTGCCCCGAACCACCCACATCAACCTCAAAGGAGCCCACTGATGGGA
TACGTTGCCATCAAGGGCGGTGGCCGGGCCATCGCCGGTGCCGAAGCCGCCGTCGAAGCCCTGCGCTGCGCCGAAGGGCCAGCGGGTACGCCGCTCACGC
TGTCGGCCATCGAACAGCAGTTGCGGTTGCTGACATCGCGCGTCGTGTCGGAAGGGGGCCTCTACCACCCACGCCTGGCCGCTCTGGCCATCAAACAGAT
GCAGGGCGACACACTGGAAGCGGCGTTCGCTCTGCGCGCCTACCGCTCCACCAAGCCACGCCTGATGGATGTGCCGGTGCAGGACACGAGCCGCATGCGC
CTAATCCGCCGGATTTCGAGCGCTTTCAAGGACATCCCCGGCGGACAGATGCTGGGCCCGACCACCGACTACGCGCTGCGCCTGATGCGTCTGGATTTGG
CCAACGAGTCGCCCGAGGACTTTCGCGCGGTCTCGCGGCGGTTTCTGGACAGCGTGGCCGACACCGACCTGCCCGACAGCTTCCCCAAGGTGGTCGATGC
CTTGCGTGACGAAGGCTTGCTGCCGCCGCTGACCCGGCGCGCCCATGCGGCGTTCGACATCACCCGCGACCCGCTGGTTTTCCCAGTGCCGCGTTCGGCG
GCCCTGGCCACCATGGCACGCGCCGAAACCGGCTCGCTCTTGGCGATTGCGTATTCCAACATGCGTGGCTATGGCGACGTGCACCCCACCATCGCCGAGC
TGCGCGTGGGCTATGTGCCGGTGATGCTGCCGCACCCGGTGACAGGCGAGCCCATCGAAGCCGGTGAGGTACTGATGACCGAATGCGAAGTGGTGGCCAT
GTTTGAGGGTGATGCTACCGACGGCCCACCCACTTTCACCCTAGGCTATGGCGCCTGTTTCGGTCACAACGAAGTCAAGGCCATCGCCATGGCCATCCTC
GACCGCGCCCTGCAAAAGGGTATGCGCGACGGTCCCAGCAACCCGTCGGAAGACCCGGAATTCGTGCTGCTGCACGTCGATGGCGTGGATTCGATGGGCT
TTGCCAGTCACTACAAGATGCCGCACTACGTGACCTTCCAGTCCGACATGGACCGGCTGCGCACCACGCAGGACAAGGCAACCGCACAACCGACCCAAGA
AGGAGCGCCATCATGAACCCGGGCTACGAACTGCCCCTGGACGAGGCGGGCTACAGCTTCGGCTTCCTGGACGAATACGCCAAGCGCGAGGTGCGCCGCA
CCATCCTCAAGGCGATCAGCATCCCCGGTTACCAGACGCCCTATGCCTCACGCGAAATGCCTATGGGGCGCGGCTTTGGCACCGGCGGTCTGCAGGTTAC
GCTGTCGCTGATTGGCGAGGGCGACACCCTGAAGGTGATCGACCAGGGCGCGGACGACTCCGTCAACGCGGTGAACCTGCGTCACTTTGTGGAACTGACC
TGCCCGGGCGTGGACACCACAGAACACACGCTTGATGCCACTCTGATCCAGTCGCGCCACCGCATTCCGGAAACGCCGCTGACCGAAGCGCAGGTGTTGA
TCCTGCAAGTGCCGTATCCGGACCCACTGGTGGTGGTGGAACCCTCCGAGGCTCGACGCAAGGTCATGCACGGCGAAGGCGACTATTCGCGGCTGCTGAC
CAAGCTGTACGAGGACATCGTGCAGTTTGACGAGATCACCATCTCGCACCGCTACCCCACGCGCATCAACGGCCACTATGTGATCGACCCCAGCCCGATC
CCGCGCTACGACGTGCCGCAGTTGCACCAGAGCCCGGCGCTGATCCTGCTGGGTGCGGGGCGCGAGAAAAAAATCTATGCGGTGCCGCCGTACACCCGCG
CCGACCCGCTGGCGTTCGACGACGTGCCATTCCGCACCGAAGACTTCACCAACGAACACGGCCAGCGCCGCGCCTGCGAACGGTGCGGCGCCACCGACAG
CTTCCTCGACGAGCTCATTGCCGACGATGGCGGCAAGCACTGGCATTGCTCGGACTCGGATTTTTGCAATAGCCGTATGGCCCGCCAGGCTGAACAAGCT
CAGGAGACCACGGTATGAAAAAAATTCTGGAAGTACGCGGACTGACCAAGATCCACGGCCGGGGTTGCGAACTCTGCCTGGAGAGCACTGGCCCCGACAT
GGACACCAACATCTGCCCACACTGTGGCTCGGTGGTGGCCTGCCACAACATCAGCCTGGACCTGCACGAGGGCGAGATCCTCGGCATCATGGGCGAGTCC
GGCAGCGGCAAGTCCACCGTGGTCAAGACGCTGTTCTTCGACGATGAGCCCACCGCTGGTGAAGCCCATGTTCGCGCTCAACGCCGCGCAGCAGCGCTGG
CTGCGCAACCACCGCTTTGGCATGGTGTACCAGAACCCGCATCTGGGACTCAATTTCAACGTCTCGGCCGGCGGAAACATTGCCGAGCGCCTGCTGATGA
GCGACCTGGCCCACTACGGCGAAATCCGCGAACGGGCGCGCAGCTTGTTGGCGCGCACTGAGGTGTTGGCAGAACGCATGGACGAGTCGCCCAAGAAGTT
CTCGGGCGGCATGCAGCAGCGCGTGCAGATCGCCAAGGCACTGGCCACCCAGCCGCCGCTGCTCTACCTCGACGAGGTCACCACCGGCCTGGACCTTTCG
GTGCAGGCGCGCATCCTGGACCTGATTCTGGAAATCCAGCAGGAGCTGGGCACCGCCATGATCGTGGTCACCCACGATCTGGGTGTCATCCGCCTGCTGA
CCGGACGCACGATCGTCATGAAATACGGCCGCGTCATCGAGTCCGGGCTGACCGACCAGATCCTCGAAGACCCCCAGCACGCCTACACCCAGCGCCTGGT
CGCGTCGGCTCTCTGAGGAAACCTGAATCATGCAAGAAGCCATCCTCAAAATCGAAGGTCTCTCCAAACAGTTCCAGCTGCACGACCAGAACAAACTGAT
CCCGTCGTGTGCACAGGTTCAACTGGAGGTGTTTGCCGGCGAGCTGACCGCGCTGATCGGCCCGACCGGCGCCGGCAAATCGTCGGTGCTCAAGGCCATT
TACCGCACCTACCTGCCCAGCAGTGGGCGCATCCTTTACCGGGACGCCAACGGTGCCATCACCGATCTGGCCCAGGCCAGCGAACACCGCATGCTGGAGC
TGCGCAAGCAGGACCTGGGTTTCGTCACCCAATTTCTGCACTGTCTACCGCGCAAGTCGGCGGTCGAGGTAGTGGCCGAGCCGCTGGTGCAGCGGGGCAG
CCCGCGCGAAGCTGCTGCCGAGCGCGCGCGCGAACTGCTGGCCCTGCTCAACGTGCCGGAACGCTTGTGGGCGGTACCACCCGCCACCTTCTCGGGCGGC
GAGAAACAGCGCGTCAACCTGGCACGCGGGCTGATCGCCCGGCCTCGGCTGCTGTTGCTTGACGAACCCACGGCCAGCCTAGACCCGTCCACCACCGACC
GCGTGGTGGAGCTGTTGAAGTCCATCAAGGCCGAAGGCGTGGCCATGCTGGCCATCTTCCACGACCCCGAACTTGTCCGACGCCTGGCCGATCGCGTCGT
AACCCTCACGCCCCCGGTGTCTGCGGCGGCATTGCTGGAGACCTGTGCCTCATGAATCCCATTTTGCTGACCCATGCCCGCGTGGTGTTCCCCACCGAAG
TCCGTGACAACGTGGCCATCCTGATCGAAGGCGACACCATCACAGCCATCGACCCGGCCAGCAGCGCAGGTGCCACCGAGATCGACCTGCGCGGTCGCAC
CCTGATGCCAGGTCTGATCGACCTGCACTGCGACGCAATGGAGAAAGAGGTGGAGCCGCGGCCCGGCGTGCACTTCCCGCTGGAGTTCGCCTGTGCCCAG
GCCGACAAGCGCAATGCGGCGGCCGGCATCACGACGGTGTTTCATGCCCTGTCCTTTGCCAACCACGAGCTGGGCGTGCGCAACAACGCCTTCGCCGCCG
AGATCGCCCGTTCGATTGGCGACTGGCAGGCCCATGCCCTGATCGACAACCGGGTGCATGTGCGTTACGAGGTGACGGACGAAACGGCGCCGCCGGTGCT
GTCGGCGCTGCTGCAGGACGGTCATGCGCACCTCATGTCTTTCATGGATCACAGCCCCGGTCAGGGTCAGTTCCGCGATGTCGAGGCGTACCGCGCCTAC
CTGGCCAAGACCTACAAGACCGATGAGGCGCAGATCGACGACATCCTGGCGCGCAAAGCCGGGGCCGCACAGGGCGCCATGCGGCGCATGGAGCAGCTTG
CGGAACTGGCCCGTGCGTGCGGCGTGTCCATTGCCAGCCACGACGACGACAGCCCGCAGAAAGTGGCGACCGTCAAGGCCCTGGGCGCTGTGGTGTCGGA
GTTTCCGGTGAACCTGGAGACGGCACAGGCCGCCCGTGCACAAGGCCTGGCCACCTTGTTTGGCGCTCCCAACATCCTGCGCGGCAAGTCCCAGTCGGGC
AACATGCGTGCCCTCGATGCCGTGCTGGCCGGTGTCGCCGACTGCCTGTGCGGTGACTACTCGCCAGCGGCGCTGTTGCCGTCGGTCATGCGCTTGCCCG
ATCTGGCCGGCATCCCCCTGGCCGAGGCTGTGGCCCTCGTCACGTGCAACCCAGCTCGTGCTGCAGGTTTGCACGACCGGGGCGAGATCGCCGTGGGCAA
GCGCGCAGACCTGATTGCGGTCAAAACCATGGGCGGACTGCCACAGGCCGAGCGGGTCTGGTCGGGCGGTAAAGCTTCGCTGGTCGCGCATTTTGACCAC
GCCTGAGAGGGACTGGCACATGCGAACTCGCCTCATCTACGTGGTCGGCGCCTCGGGCAGCGGCAAGGACACGCTCATGGGCCATGCCCGCCAGAAGCTG
GCGGGTGATCCCAGGGTGTGTTTTGCCCATCGCTACATCACCCGACCCGCAACGGCAGGCGGCGAAAACCATGTGGCCTTGACCACGGAGGAATTCACCG
CTCGCCAGAACGGCAAGCTCTTTGCCATGCACTGGTCCAGCCACGGCCTGCATTACGGAATCGGCATCGAGATCAACCAGTGGCTGGGCAAAGGCATCAC
GGTGGTGATCAACGGCTCGCGGGAATACCTGGACGAGGCCCGCCAACGTTACCCGGAGCTGCTGCCGGTGACGATTGACGTGGCCACCACCGTGCTGCGT
GATCGGCTGCTGGCCCGTGGCCGCGAGGATGCCGAATCCATTGAGCAGCGCCTGCACCGCCATGAAACGTTGCGCCTGCAGCCCGTGCCCGGTGTGCTCA
TCCAGAACAACGGACCCGTCGAGGTGGCCGGCGAAGCGCTGATCCGGTTGATCGCAGAACACACCCAAGGAGCGCCAGTATGCGTGTGAGTTTTCTGGGC
ACGGGCGCTGCGGGCGGGGTTCCGCTCTACGGTTGCACCTGCCGGGCCTGTGAACGCGCAAGGACCGAGCCACACTTCGTCCGCCGCCCTTGCAGCGCCC
TGATTGAATCCGGAGGTACCCGGGTGCTACTGGATGCCGGGCTGATGGACCTTCACGAACGGTTTGCGCCGGGTAGCCTGGACGCGATTGTTCTCACGCA
CTACCACCCCGACCACGTGCAGGGACTCTTTCATCTGCGCTGGGGTAAGGGGACGCCCATCACAGTCTATGGCCCACCAGACAGCGAAGGCTGCGCCGAT
TTGTTCAAGCACCCTGGTGTACTGGCCTTCGAGACGGTGCACAAGTTCGAGGCCTTCACCGTCGGGGCGCTGCGCCTGACGCCCCTGCCGCTGCTTCACT
CCAAACCCACGCTGGGCTATGCCATCGAGGGCACCCAGGGCCAACGCTTCGCCTACCTCACAGACACCCTGGGTTTGCCGCCGAAGTCGGCCAAGTTCCT
GCGCGCCTGGGGCGACTTTGACATGGCCATCGACTGTTCCTATCCGCCGCACCCGACCCCGAAAAACCACAACGATTGGGACGAAGCACATCGGTGTGCC
ATCGAATCTGGTGCCCGCATCACCTGGCTCACCCATGCCGGTCATGCGCTGGACGACTGGATGATGGAAGAGACGCCGAGCGTCGCAAGTCATATCCGGC
TGGCCCGGGACGGCAGCACGGCCGACATACCGTCCCAAACGCAATGAACGCGCCGCTGGCACTGGCCCTGTCGGTGGCCATGCACGTCACCTGGAACCTG
ATGGCACGGCATTTGCCCAGGGAATCGAACCCGCTGTGGTGGGTGTTGCTCGCCCATCTGGTGCTGTTTGCGCCCTGGGGGTTCTGGGAGCTGGCGACAA
CCGTCGTTTGGTCACTGGAGATGACGCTGCTACTGATCGTATCGGCCACTGCGAATGTGGTTTATTTCTCCGGTCTGGCCAGGGCCTACGAGCACGCACC
GGTCGCACTGGTCTATCCTCTGGTGCGCAGTTCACCTCTTTTCATTGCGATCTGGGGCACGCTGTTCTTCGGTCAAAATCTCCCGCCCATTGCCTGGCTG
GGCATTGGCATCAGCGTGCTGGGCTTGCTCGTCATGGCATCGAGTGCTCAACAGGGGTCGGATCGACGAGCATTCCGATGGGCCATGCTGGCCATGTTGG
CGACAAGCGTTTATTCCCTGAGTGACAAGGCGGCCACCGAACACATCCCAAGCTTCATGGGGCTCGTGGGTTTTCTGTCCGTCGGCTACCTGGCATCCTG
GATCAGCATGACCTTGCGCATGCATCGGCACACCCGCAGTTGGGTGCCGGCACAGCGCATTGATCTCGCGTCGCTGGCTCTTGGCGGAACCTGTATCGGT
CTCGCCTACGCCTTGGTTATCCACGCCATGCGCCAGTTGCTGCGGCGGAGGTCGTGTCGTACACCAACGCCGGTATCGTGCTCGCTGCAGTTCTCTCCAT
TTTTTTGTTCAATGACAAAGTCGGATGGCAAAAGAGAATCATGGGGGTCGTGATCATCACGAGTGGTTTGGGGGTGCTTGCCATGAGGTGAGCGACACAA
TACCAACCATCGCACACCAGCATTCCAACCCGGCTCGCGACCTGCCGGTGAAGTAAAAGCGACTTCCGATATGTCCCAAATTTCCCGATACGTCGAGGCC
GCCGAGCGTGACAACACGCGTCGAAGCTATGCCGCAGCCATTCGCCATTTCGAGGTGGAGTGGAAAGGCTTGCTGCCAACGACCGCTGATGCAACCTCCC
GTTACCTGGCTGACCACGCGGCCACGCTGGCGATCAGCACCCTCCGTCAGCGGCTCGCCGCGCTCTCGCGCTGGCACATCGACCATGGTTTTGCAGACCC
GACCAAGGCACCCTTGGTGCGCCAGGTTCTCAAAGGCATTCGCTCCATTCACTCGGTTGCAGAAAAGCGGGCACGCCCCCTTGAAATCGATGTCGTCCAG
CAGATCGATCAATGGCTGGGGGTGGCCATCGGCAACGCAGAACGCAGCGATGACCGATTGGCGCTGCTTCGCCACACCCGCAACCGCAGTTTGCTGCTGC
TGGGTTTCTGGCGGGGATTTCGATCGGACGAGTTGGTCAACCTGCGGGTGGAGAACGTGGAAGTCTCGCCTGGCGAAGGGCTGTCGTGCTACCTGAGCCG
CAGCAAGGGCGATCGGCAGATGCTGGGCCGCGTATACAAATGTCCGGCGCTGTCCCGCCTGTGTCCTGTGACGGCTTTCACGGCATGGGTCAGTCTGGTC
GGCCTGACCCAAGGCCCGGTGTTTCGCAAGATCGACCGCTGGGGGCGAATCGGTCAAGAAGGGCTGCATGCCAACAGCCTGATCCCATTGTTGCGCAGCC
TTTTGGCTGAGGCCGGGGTCGCCGCTTCCGAGGCATACAGCAGCCACTCCCTGCGTCGCGGATTTGCCGGTTGGGCTCGCGCCAGCGGTTGGGACATCAA
GGAACTCATGGAGTACGTGGGCTGGAAGGATGTCAAATCGGCCATGCGTTATCTGGATGCCTCCGGCAGCGCACTTCAGGCCCGGTTTGAGGCGGGTCTC
GCAACACTGGCCCCAGCAGATCGAGCGGATCGGTCACCACCGCCTTCGATGCACGCGCCGGCCGAGCAAACCAAGGAACAGGCCCAGAGGCCCCGTCTGC
CTGAGCTCGCAACACCATCGGCAATCCTGCGCGTCACAGTGTTGCTGGCCCGGTTCAGCCCACAATCGCGCGGGCTGACGAGAGGCCGGCGGCTGATCGA
GCAGACCTGCTTCGAGCGCTACGCCATGCAGCGCTTGAATACCGAGGGCACACAGTACGAACTGACAGTGCCCTACGAATCCAGGGATTCACTGGAAGAG
GCGATTGCCGCTTTGCTCGATGACATGTACCGCATCGCCGAGGACAACCAGTGCCTGCTGGAGGCTGCGTTTCACGAGCCGGCCACCGACTCGTATTGGG
ACTGAAGGGCTGGGATGATGACGGCGGATGGCACGACGCACCAGCGGGGGAGGCCTCACGAATGACTACGCTTCATGAGACGGCCTATCCCCATCTGAAG
CCCGACCCCACTGAGAGGGAGCTGGCAGAACTCTTCACACCCACCGAGGCGGAACGGGCGCTGGTGGCGGGAGTCGGCAAACGGCCTTTACCTCGCGTGG
CCGCCCTCATTCACCTGAAGGTTTTCCAGCGCCTGGGGTATTTTCTGACACTGTCCGATGTGCCGCAGGTGATCAGGGAACACGTTGCACAGCACGCGGG
TGTTCCGCGGGCGCCAGCGCTGGCGGACCTCAAGCGCTTTGAGGCCTCGGGCTCGCGCATGGTGGTCTTCACAGCATTGCGTCGCTATCTGAACGTCAAA
CCACTCAACCCGGCGGGGTACGCCTGGCTGGGCGTTGTGGCGGACACCGCGGCCGAGACGAAACACGCCGTGGCCGACATCATCAACGTGATGCTGGAGG
AGTTGGTCCACCATCGCTGCGAATTGCCCGCCTTCTCGACGCTGGATCGGATGGCGTTTCGTGCCCGGGAAAAGAGCAACAACCAGCATTTCTCCGCCAT
CGCTGGGCAACTGACGTCACAGACGAAGACATTGATCGATGGCTTGCTCAAGACGGCCACGGGCGAGTCGGCGTCACCCTGGCAAATGCTCAAGCGCGAG
CCCAAGCGGCCCACCAACAAAGAAACACGGACCTACATCCAGCACATCCGGCGTCTGCAGCACCTGGTGGAGCAACTTCCCAAGCCCGACGTGCCCGTGC
CCAAGCTCAAGCAGTTCCGGCTGCTGGCGCGCGCGCTCAATGCCACTGAGATGGCTGAACTCAAGCCACAAAAGCGCTATGCGCTGGTGGTGATCTTCAT
TCGGGCGCAGCATGCCCAATCGCTGGACGACGCTGCCGACCTGTTCATCCGTCTCATGCAGAACCTGGAGAACAATGCCCGGCAGAAACTGTTGTCCTTC
CAGCAGGAGCGCGTCCACAAGACCGACATGCTGGTCGGGCAGCTCAAGGACATCCTGGGTGCCTACCAGTTGGTTGGGACCGACACCCAACGCGTCGAAG
CCATCAGCACGACCCTGGTGGCCGAAGTGGACGAGCTGCTGAACGAATGCGAACAGCATCTGGCCTATGCCGGGCGCAACCACCTGCCGTTCCTGCTGCA
GCCGTACAAGATGGTGCGAGCGCAGCTGCTCAACTGCATCGACATCGCGTCGCCCAAGGCCAGCAGCGAGGACCTGGTGGTGGAGCGGCTGATGGAAGCC
CTCTCCAAACTGCGCGACAACCGTGCCGACACCGTACCGCTGGACATGCTGGGCCTGAGTGAAGACACGGATTTGCGCTGGATGTCGGCCCAGTGGAGAA
AGCTTGTGCTGGTCAAACCGGCAGGCAAGGGCCGCGCGGAGTCCGTCCGCCGCCGGTATTTTGAGCTGGCCGTCATGCACGCCGTCAAGGACGATCTGAA
GTCCGGAGACCTCTTCATCAAGTTCGGGGAGCGCTACGACGACTACCGCGAGCAGTTGGTCGATGACGAAACCTTTGAACGCGAGCTGGGCGACTATGGG
CAGGTCACGGGCATCGAGACGGAGCCCGGCGCCTTCGTGTCGAAGCTGAAATCGTCCATGGCGCTGCGAGCCATGGAAATCGATGCCGGATTTCCAGAAA
ACGCCCATGCTGAAATCGTCGATGGACGCCTGATCCTCAGAAAACCGCCTCGCTCAGACATTGTCGAGGCCGCCGCGCGCATCGACGGCATGATCACCGA
GCGGATGGAGGCGGCCAGCATTGTGGACGTGATGATCGACACCGAGCGGTGGCTGGACCTTCACAAGCTGTTTCGTCCGCTGGCGGGGACCGACAGTCGC
CTTGAGGACTTGCGCATGCGCGTGATCACGACCTTGTTCTGCTATGGCTGCAACCTGGGACCCGTTCAGACCGCCAAATCGATCAAAGGTCTGAGTCGGC
GTCAGATTTCCTGGCTGAACCTGAAATACGTCAGCGAAGACCTTCTGGACAAGGCCATCGTCAAGGTGATTAACGCCTACAACAAGTTCGAACTGCCCGG
TTACTGGGGCACCGGCAAACACGCATCGGCCGATGGCACCAAGTGGAACCTGTACGAGCAGAACCTACTGTCCGAGCACCACATCCGCTATGGCGGCTAC
GGCGGCATCGGCTACTACCATGTCTCCGACAAGTTCATCGCACTGTTCAGTCACTTCATTTCTTGTGGCACCTATGAGGGGATCCACATCCTGGATGGGC
TGATGAGCAACGAGTCCGACATTCGGCCCGACACGATCCACGGTGACACGCAGGCACAGAGCTACCCGGTTTTTGCGCTGGCTCACTTGCTTGGCATCCA
GCTCATGCCGCGCATCCGAGGCATCCAGGACCTGAAATTCCATCGCCCGCAGGTGGGCACCGTGTACCAGAACATCAATACGCTGTTCAGCGACGTGATC
GACTGGCAGTTGATTGAACTGCATCTGCCGGCGATGCTGCGGGTGGCTGTGTCTATCAAGACGGGAAAGATCACGCCATCGGCCATCCTGCGCCGACTTG
GCACTTACAGCCGCAAGAACAAGCTGTACTTCGCCTTCGTCGAACTCGGCAAAGTGATCCGGACCATGTTTCTGCTGAGCTACATCGGGGACGTCGGACT
GCGCAAGGTGATCCACGCCGAAACCAACAAGAGCGAACAATTCAACGGCTTTGCCGGCTGGTCGTTTTTCGGGGGAGAGGGGATCATTGCCGAAAACATC
CGGCACGAGCAGCGCAAGGTCATCAAGTACAACCACCTCGTGGCCAACATGATCATCCTGCACAACGTGGTGGGCATGACACGTGTACTGCGAGAGCTTC
GCGACGAAGGCACCGAGATCACGCCGGAGATATTGGGCGGCCTTGCGCCGTTCCGCACGGCCCATATCAACCGATTTGGAGACTACACACTCGACTTCCG
CCGGAAGATCGGTCCGCTGGATTTCGAAGTCACCATTATTCCAATATAATCATAAGGTTAGGTTCGTTTCTGCGGTTTTTTACATGAATCCCTGCCGACC
CTC
Protein section
ORF number : 2

 

ORF 1
LengthBeginEndStrandFusion ORF
1335 bp444 aa1547116805+No
ORF function : Accessory Gene
AG : Tn3 resolvase

ORF sequence :

MSQISRYVEAAERDNTRRSYAAAIRHFEVEWKGLLPTTADATSRYLADHAATLAISTLRQRLAALSRWHIDHGFADPTKAPLVRQVLKGIRSIHSVAEKR
ARPLEIDVVQQIDQWLGVAIGNAERSDDRLALLRHTRNRSLLLLGFWRGFRSDELVNLRVENVEVSPGEGLSCYLSRSKGDRQMLGRVYKCPALSRLCPV
TAFTAWVSLVGLTQGPVFRKIDRWGRIGQEGLHANSLIPLLRSLLAEAGVAASEAYSSHSLRRGFAGWARASGWDIKELMEYVGWKDVKSAMRYLDASGS
ALQARFEAGLATLAPADRADRSPPPSMHAPAEQTKEQAQRPRLPELATPSAILRVTVLLARFSPQSRGLTRGRRLIEQTCFERYAMQRLNTEGTQYELTV
PYESRDSLEEAIAALLDDMYRIAEDNQCLLEAAFHEPATDSYWD

 

Blast result :
ORF 2
LengthBeginEndStrandFusion ORF
2691 bp950 aa1715919849+No
ORF function : Transposase
Chemistry : DDE

ORF sequence :

MAALIHLKVFQRLGYFLTLSDVPQVIREHVAQHAGVPRAPALADLKRFEASGSRMVVFTALRRYLNVKPLNPAGYAWLGVVADTAAETKHAVADIINVML
EELVHHRCELPAFSTLDRMAFRAREKSNNQHFSAIAGQLTSQTKTLIDGLLKTATGESASPWQMLKREPKRPTNKETRTYIQHIRRLQHLVEQLPKPDVP
VPKLKQFRLLARALNATEMAELKPQKRYALVVIFIRAQHAQSLDDAADLFIRLMQNLENNARQKLLSFQQERVHKTDMLVGQLKDILGAYQLVGTDTQRV
EAISTTLVAEVDELLNECEQHLAYAGRNHLPFLLQPYKMVRAQLLNCIDIASPKASSEDLVVERLMEALSKLRDNRADTVPLDMLGLSEDTDLRWMSAQW
RKLVLVKPAGKGRAESVRRRYFELAVMHAVKDDLKSGDLFIKFGERYDDYREQLVDDETFERELGDYGQVTGIETEPGAFVSKLKSSMALRAMEIDAGFP
ENAHAEIVDGRLILRKPPRSDIVEAAARIDGMITERMEAASIVDVMIDTERWLDLHKLFRPLAGTDSRLEDLRMRVITTLFCYGCNLGPVQTAKSIKGLS
RRQISWLNLKYVSEDLLDKAIVKVINAYNKFELPGYWGTGKHASADGTKWNLYEQNLLSEHHIRYGGYGGIGYYHVSDKFIALFSHFISCGTYEGIHILD
GLMSNESDIRPDTIHGDTQAQSYPVFALAHLLGIQLMPRIRGIQDLKFHRPQVGTVYQNINTLFSDVIDWQLIELHLPAMLRVAVSIKTGKITPSAILRR
LGTYSRKNKLYFAFVELGKVIRTMFLLSYIGDVGLRKVIHAETNKSEQFNGFAGWSFFGGEGIIAENIRHEQRKVIKYNHLVANMIILHNVVGMTRVLRE
LRDEGTEITPEILGGLAPFRTAHINRFGDYTLDFRRKIGPLDFEVTIIPI

 

Blast result :
Comments
The transposase of ISPa43 (ORF19) is 55% aa similar to ISPa42. There are 19 ORFs:
ORF18: resolvase,
ORF19: transposase
References
1] ISfinder annotation (2012)